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ProteomicsProteome-Centric Cross-Omics Characterization and Integrated Network Analyses of Triple-Negative Breast Cancer
We undertook the first systemic proteomic study of a 90-case cohort of triple-negative breast cancer (TNBC) with a panoramic proteome view in quantification, phosphorylation, and DNA-binding capacity. Four integrative subtypes (iP-1-4) were stratified based on the proteome quantification profile and...
ORGANISM(S): Homo Sapiens 
2021-08-24 | PXD028102 |
Proteomicsproteome profiling using Orbitrap Fusion
Fresh frozen tumor tissues with less than 30% non-tumor tissue were macrodissected for further use. The percentage of tumor purity was confirmed to be 50% or more in all tumor specimens. Collected specimens were stored in a -80℃ refrigerator until being used for proteomics analysis. 15 Proteomic Ana...
2023-07-26 | OEX00014789 | NODE
Proteomicsproteome profiling using Orbitrap Fusion Lumos
Fresh frozen tumor tissues with less than 30% non-tumor tissue were macrodissected for further use. The percentage of tumor purity was confirmed to be 50% or more in all tumor specimens. Collected specimens were stored in a -80℃ refrigerator until being used for proteomics analysis. 15 Proteomic Ana...
2023-07-26 | OEX00014795 | NODE
Proteomicsproteome profiling using Q Exactive HF
Fresh frozen tumor tissues with less than 30% non-tumor tissue were macrodissected for further use. The percentage of tumor purity was confirmed to be 50% or more in all tumor specimens. Collected specimens were stored in a -80℃ refrigerator until being used for proteomics analysis. 15 Proteomic Ana...
2023-07-26 | OEX00014796 | NODE
ProteomicsTFRE (Transcription factor response elements)
TFRE pulldowns, and trypsin digestion Tumor and paired NAT breast tissues were washed twice with ice-cold phosphate-buffered saline (PBS) and minced and lysed in lysis buffer (8M Urea, 100mM Tris Hydrochloride, pH=8.0) containing protease and phosphatase Inhibitors (Thermo Scientific) followed by 1 ...
2023-07-26 | OEX00014791 | NODE
ProteomicsA region-resolved mucosa proteome of the human stomach
The human gastric mucosa is the most active and functional layer that carries out food digestion and metabolic processes in physiological conditions and also the main origin of carcinogenesis in gastric cancer. Anatomically, the human stomach is divided into 7 regions with physiological functions, b...
ORGANISM(S): Homo Sapiens 
2018-11-26 | PXD011821 |
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