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TranscriptomicsArabidopsis thaliana roots: inoculated roots with a bacterium Antarctic (Pseudomonas sp, Dac-bac TI-8) vs untreated roots (control)
Transcriptional profiling of Arabidopsis thaliana roots comparing inoculated roots with a bacterial strain Antarctic (Pseudomonas sp, Da-bac TI-8) vs untreated roots (control) Two-condition experiment, inoculated roots vs. untreated roots (control). Biological replicates: 4 inoculated roots replic...
ORGANISM(S): Arabidopsis thaliana 
2013-03-28 | E-GEOD-45559 | biostudies-arrayexpress
TranscriptomicsGene expression data from advanced gastric and colon cancers: tumoral vs. matched non-tumoral tissues
This SuperSeries is composed of the following subset Series: GSE38932: Expression data of gastric cancer by conventional microarray and by suppressive subtractive hybridization coupled to microarray GSE38939: Expression data of colon cancer by conventional microarray and by suppressive subtractive h...
ORGANISM(S): Homo sapiens 
2012-06-26 | E-GEOD-38940 | biostudies-arrayexpress
UnknownTissue-based multiphoton analysis of actomyosin and structural responses in human trabecular meshwork.
Not available
S-EPMC4756353 | biostudies-literature
TranscriptomicsEffects of upf1delta on RNA stability
The Upf1 protein is a major factor in nonsense-mediated decay. We used an in vivo labelling system (Cleary et al. 2005 Nat Biotechnol. 23, 232-7) to estimate the decay rates of upf1delta and wild type cells over-expressing the transcription factor Mei4.
ORGANISM(S): Schizosaccharomyces pombe 
2013-06-03 | E-MTAB-1324 | biostudies-arrayexpress
TranscriptomicsHuman Tissues: pancreatic cancer vs. pancreatic non-tumoral tissues
Transcriptional profiling of pancreatic tumors comparing to adjacent non-tumoral pancreatic tissue by two strategies. The first strategy implies a traditional microarray assay, while the second involves a previous Suppression Subtractive Hybridization (SSH) and then the traditional microarray assay....
ORGANISM(S): Homo sapiens 
2012-07-30 | E-GEOD-39751 | biostudies-arrayexpress
TranscriptomicsExpression data of colon cancer by conventional microarray and by suppressive subtractive hybridization coupled to microarray
Transcriptional profiling of colonic tumors compared to paired adjacent non-tumoral colonic tissue by two strategies. The first strategy is a conventional microarray assay, while the second strategy involves a previous Suppression Subtractive Hybridization (SSH) followed by a conventional microarray...
ORGANISM(S): Homo sapiens 
2012-06-26 | E-GEOD-38939 | biostudies-arrayexpress
TranscriptomicsExpression data of gastric cancer by conventional microarray and by suppressive subtractive hybridization coupled to microarray
Transcriptional profiling of gastric tumors compared to paired adjacent non-tumoral gastric tissue by two strategies. The first strategy is a conventional microarray assay, while the second strategy involves a previous Suppression Subtractive Hybridization (SSH) followed by a conventional microarray...
ORGANISM(S): Homo sapiens 
2012-06-26 | E-GEOD-38932 | biostudies-arrayexpress
TranscriptomicsEffects of upf2delta and upf3delta on gene expression
The Upf1, Upf2 and Upf3 proteins cooperate to implement nonsense-mediated decay. We used DNA microarrays for profiling RNA expression levels of upf2 and upf3 mutants
ORGANISM(S): Schizosaccharomyces pombe 
2013-06-03 | E-MTAB-1325 | biostudies-arrayexpress
TranscriptomicsGene expression changes in PBMCs from metabolic syndrome patients after acute intake of phenol-rich virgin olive oil
Some studies have shown that acute intake of high-phenol virgin olive oil reduces pro-inflammatory, pro-oxidant and pro-thrombotic states, but nowadays still remains unclear if those effects attributed to its phenolic fraction could be exerted at transcriptional level in vivo. Two virgin olive oil-b...
ORGANISM(S): Homo sapiens 
2010-04-20 | E-GEOD-15812 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of primary rat hippocampal culture cells overexpressing an activated form of calcineurin
Micorarray analysis was performed on RNA samples from hippocampal cultures infected with either Ad-aCaN or Ad-LacZ or uninfected. Each sample was applied to its own GeneChip (Rat RG-U34A; n=7-9 chips/group). Chips were then processed and scanned using Agilent Affymetrix GeneArray Scanner. MAS5 was u...
ORGANISM(S): Rattus norvegicus 
2007-09-15 | E-GEOD-1978 | biostudies-arrayexpress
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