Graham C C - OmicsDI

Show results for

Unknown (3339)
Transcriptomics (289)
Genomics (123)
Proteomics (110)
Metabolomics (19)
Models (5)
Other (2)
Genomic (1)

Organisms

Homo sapiens (224)
Mus musculus (54)
Saccharomyces cerevisiae (13)
Eohaustorius estuarius (11)
Arabidopsis thaliana (11)
Rattus norvegicus (10)
Danio rerio (6)
Apis mellifera (5)
Brassica rapa (4)
Chlorocebus sabaeus (4)
Mycobacterium tuberculosis (4)
Glycine max (4)
Helicobacter pylori (4)
Anopheles gambiae (3)
Escherichia coli (3)
Sus scrofa (3)
Triticum aestivum (3)
Sinorhizobium meliloti 1021 (2)
Legionella pneumophila subsp. pneumophila str. Philadelphia 1 (2)
Fragilariopsis cylindrus (2)
Schizosaccharomyces pombe (1)
Capsella grandiflora (1)
Mycobacterium phage Giles (1)
Carica papaya (1)
Allium cepa (1)
Aloe vera (1)
Camponotus floridanus (1)
Musa sp. (1)
Salmonella enterica subsp. enterica serovar Paratyphi A (1)
Pimephales promelas (1)

Organisms

Hordeum vulgare (2)
Mus musculus (2)
Tympanuchus cupido pinnatus (1)
Proteromonas lacertae (1)
Helicobacter pylori (1)
Triticum aestivum (1)
Homo sapiens (1)

Repository

biostudies-arrayexpress (304)
EGA (94)
pride (90)
MetaboLights (18)
MassIVE (13)
ENA (10)
geo (5)
BioModels (4)
GPMDB (2)
PanoramaPublic (2)
PAXDB (2)
PeptideAtlas (2)
dbGaP (1)
FAIRDOMHub (1)
GNPS (1)
jPOST (1)

Tissue

Brain (16)
Cell culture (15)
Epithelial cell (8)
Permanent cell line cell (5)
Epithelial cell of prostate (4)
Liver (4)
Blood cell (4)
Prostate adenocarcinoma cell line (3)
Hippocampus (3)
Heart (3)
Blood plasma (3)
Blood (3)
Bile duct (2)
Primary neuron (2)
Milk (2)
Neuron (2)
Cell suspension culture (2)
Fibroblast (2)
Primary cell (2)
Lung (2)
Cholangiocarcinoma cell line (1)
Eye photoreceptor cell (1)
Mammary gland tumor cell (1)
Forelimb muscle (1)
Articular cartilage (1)
Neural retina (1)
Generation of neurons (1)
Stromal cell (1)
Oligodendrocyte (1)
Tongue (1)

Disease

Disease free (4)
Prostate carcinoma (3)
Alzheimer's disease (3)
Not Available (2)
Limb-girdle muscular dystrophy (2)
Cholangiocarcinoma (2)
Cardiovascular system disease (2)
Type 2 diabetes mellitus (2)
Breast cancer (2)
Vitamin B12 deficiency (1)
Bladder carcinoma (1)
Acute Myeloid Leukemia (1)
Systemic mastocytosis (1)
Obsessive-compulsive disorder (1)
Amyloidosis (1)
Eye degenerative disease (1)
Status epilepticus (1)
Krabbe disease (1)
Kabuki syndrome (1)
Pancreatic ductal carcinoma (1)
Neurological dysfunction (1)
Wilson disease (1)
Lung small cell carcinoma (1)
Irritable bowel syndrome (1)
Hepatocellular carcinoma (1)
Plasmodium falciparum malaria (1)
Epilepsy (1)
Prostate adenocarcinoma (1)
Prostate cancer (1)
Lymphoma (1)

Technology Type

Mass Spectrometry (90)
Shotgun proteomics (54)
Bottom-up proteomics (12)
Mass spectrometry (10)
Data-dependent acquisition (10)
Affinity purification coupled with mass spectrometry proteomics (10)
Illumina 15K (8)
NMR spectroscopy (5)
SWATH MS (4)
Top-down proteomics (4)
Chemical cross-linking coupled with mass spectrometry proteomics (4)
Data-independent acquisition (3)
Illumina HiSeq 2000 (2)
Mass spectrometry assay (2)
SRM/MRM (2)
Illumina OncoArray (1)
Illumina (various), Illumina (Various) (1)
ZCall, HumanExome_12v1.1_A -GenCall (1)
HumanOmniExpress-12 v1.1 BeadChip-GenCall (1)
Illumina HiSeq 2000, Illumina HiSeq 2000 (ILLUMINA) (1)
Illumina HiSeq 2500 (1)
Illumina Genome Analyzer II (1)
NMR spectroscopy assay (1)

Instrument Platform

Illumina HiSeq 2000 (10)
Illumina HiSeq 4000 (8)
Illumina NovaSeq 6000 (7)
NextSeq 500 (7)
Illumina HiSeq 2500 (6)
AB SOLiD 4 System (5)
NextSeq 2000 (4)
TripleTOF 5600 (3)
LTQ Orbitrap Elite (3)
428 [Affymetrix] (2)
Instrument (2)
Mastercycler pro S Thermocyler (Eppendorf); 2100 Bioanalyzer (Agilent) (1)
2100 Bioanalyzer (Agilent); Axio Imager.Z2 (ZEISS) (1)
CryoStar NX70 Cryostat (Epredia) (1)
HiSeq 2000 (1)
VersArray ChipReader [Bio-Rad Laboratories] (1)
454 GS FLX (1)
G2505B scanner (Agilent) (1)
Agilent 2100 Bioanalyzer (1)
Other (1)
Bioanalyser (1)
418 [Affymetrix] (1)
Illumina NovaSeq X (1)
NA (1)
Illumina HiSeq 1000 (1)
BGISEQ-500 (1)
HiSeq X Ten (1)
Illumina HiSeq 3000 (1)
AB 5500xl Genetic Analyzer (1)
LCMS-IT-TOF (1)

Publication Date

2015 (44)
2016 (36)
2014 (36)
2013 (35)
2010 (31)
2023 (29)
2011 (29)
2012 (26)
2022 (21)
2024 (19)
2021 (17)
2025 (16)
2008 (15)
2017 (14)
2026 (12)
2019 (11)
2018 (11)
2009 (11)
2007 (11)
2020 (9)
2006 (5)
2005 (3)

UNIPROT ID/AC

Q8IIK9_PLAF7 (2)
Q8ILI7_PLAF7 (2)
O96219_PLAF7 (2)
Q8I482_PLAF7 (2)
Q8IAT5_PLAF7 (2)
Q9U0M7_PLAF7 (2)
Q8I5H7_PLAF7 (2)
C0H4N9_PLAF7 (2)
C0H4U0_PLAF7 (2)
Q8IBZ7_PLAF7 (2)
Q8II73_PLAF7 (2)
C6KTF3_PLAF7 (2)
C6KT59_PLAF7 (2)
Q8IL51_PLAF7 (2)
Q8IEN2_PLAF7 (2)
Q8IBP4_PLAF7 (2)
Q8IC14_PLAF7 (2)
C0H5J6_PLAF7 (2)
Q8I3F8_PLAF7 (2)
Q8I5Y1_PLAF7 (2)
Q8I2Q0_PLAF7 (2)
Q8I320_PLAF7 (2)
Q8ILZ3_PLAF7 (2)
A0A143ZZG4_PLAF7 (2)
Q8IJ32_PLAF7 (2)
Q8IIR2_PLAF7 (2)
5833.PF14_0009 (2)
P04695 (1)
P62873 (1)
P63211 (1)

CHEBI ID

CHEBI:15741 (8)
CHEBI:18012 (7)
CHEBI:30769 (7)
CHEBI:15354 (7)
CHEBI:32816 (7)
CHEBI:17754 (7)
CHEBI:28300 (7)
CHEBI:78320 (7)
CHEBI:30751 (6)
CHEBI:15366 (6)
CHEBI:27897 (6)
CHEBI:16449 (6)
CHEBI:17822 (6)
CHEBI:16737 (6)
CHEBI:16919 (6)
CHEBI:27266 (6)
CHEBI:17368 (6)
CHEBI:18237 (6)
CHEBI:18186 (6)
CHEBI:15996 (5)
CHEBI:37084 (5)
CHEBI:16010 (5)
CHEBI:30794 (5)
CHEBI:17268 (5)
CHEBI:16865 (5)
CHEBI:16704 (5)
CHEBI:17568 (5)
CHEBI:17552 (2)
CHEBI:18367 (2)
CHEBI:35224 (1)

Metabolite Name

Formate (4)
Acetate (4)
Fructose (4)
Glycerol (4)
Tyrosine (4)
Threonine (4)
Lactate (4)
Glutamine (4)
Uracil (4)
AMP (4)
Succinate (4)
Hypoxanthine (4)
Niacinamide (4)
Lactate (4)
Glycine (4)
Creatinine (4)
Glycerol (4)
Choline (4)
3-Hydroxyisovalerate (3)
Glutathione (3)
Glutamate (3)
Aspartate (3)
Valine (3)
Citric acid (3)
Sucrose (3)
Leucine (3)
Tryptophan (3)
Serine (3)
Alanine (3)
Xanthine (3)

First Public Date

2014 (4)
2017 (2)
2025 (1)
2024 (1)
2022 (1)
2013 (1)

Modelling Approach

Ordinary differential equation model (3)
Constraint-based model (1)

Lab affiliation

Faculty of Life Science, University of Manchester, United Kingdom (3)
CRUK - Beatson Institute for Cancer Research - Switchback Rd, Bearsden, Glasgow G61 1BD - United Kingdom (3)
Queensland Brain Institute, The University of Queensland, St Lucia Campus (Brisbane), QLD 4072, Australia (2)
Macquarie Medical School Macquarie University Australia Sydney 2109 (1)
Department of Molecular Sciences, Faculty of Science and Engineering, Macquarie University, Sydney, NSW, Australia (1)
Division of Neurobiology The Roslin Institute Royal (Dick) School of Veterinary Studies College of Medicine and Veterinary Medicine University of Edinburgh Easter Bush Midlothian EH25 9RG SCOTLAND, UK t: 44 (0)131 651 9119 e: T.M.Wishart@Roslin.ed.ac.uk website: http://www.roslin.ed.ac.uk/tom-wishart http://www.euanmacdonaldcentre.com/research.html (1)
Synapse Proteomics Group, Children's Medical Research Institute, University of Sydney, Westmead, New South Wales, Australia (1)
Cambridge Institute of Therapeutic Immunology and Infectious Diseases, Department of Medicine, University of Cambridge, (1)
Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota (1)
Department of Molecular Physiology and Biophysics, University of Iowa, Iowa city, IA (1)
Johns Hopkins Bloomberg School of Public Health (1)
Cedars-Sinai Medical Center Advanced Clinical Biosystems Research Institute Advanced Health Science Pavillion, Room A9307 8700 Beverly Blvd. Los Angeles, CA 90048 (1)
Department of Laboratory Medicine and Pathology, Mayo Clinic, 200 First ST SW, Rochester, MN 55905, USA (1)
The Laboratory of Molecular Genetics, National Heart Lung and Blood Institute (1)
Mork Family Dept of Chem Eng and Mat Sci (1)
Children's Medical Research Institute, Faculty of Medicine and Health, Westmead, NSW, Australia (1)
Research Officer, Department of Pharmacology, National Research Institute of Basic Ayurvedic Sciences (NRIBAS), Kothrud, Pune - 411038, Maharashtra, India (1)
Center for Neurodegenerative Science, Van Andel Institute, Grand Rapids, MI, 49503 USA (1)
Macquarie Medical School, Faculty of Medicine and Health Sciences, Macquarie University, Sydney, Australia (1)
Synapse Proteomics, Children’s Medical Research Institute, The University of Sydney, 214 Hawkesbury Road Westmead NSW 2145 Australia. (1)
u o edinburgh (1)
University of Pittsburgh, Department of Biological Sciences (1)
Department of Human Health Sciences, University of Guelph, ON, Canada (1)
Cedars-Sinai, Neurosurgery - Pavilion, 127 S San Vicente Blvd #A6600, Los Angeles, CA, 90048 (1)
Reader in Zoology (Molecular Ecology) (1)
Department of Pathology, University of Cambridge, Tennis Court Road, Cambridge CB2 1QP (1)
Deputy Head of School, School of Biological Sciences | 19 Chlorine Gardens| Belfast, BT9 5DJ Queen’s University Belfast | +44 28 9097 2383 | https://www.qub.ac.uk/schools/SchoolofBiologicalSciences/ (1)
Mork Family Department of Chemical Engineering and Materials Science, University of Southern California, USA (1)
USC Viterbi School of Engineering, Mork Family Dept. of Chemical Engineering (1)
Division of Neurobiology The Roslin Institute Royal (Dick) School of Veterinary Studies College of Medicine and Veterinary Medicine University of Edinburgh Easter Bush Midlothian EH25 9RG SCOTLAND, UK (1)

IsPrivate

False (4)

Model Flag

Non Kinetic (2)

Classification

bacteria (1)

Modification

N6 (1)
4-tetrahydrothiazine-3-carboxylic acid (1)

Study type

Transcription profiling by array (190)
RNA-seq of coding RNA (49)
ChIP-seq (16)
Methylation profiling by array (8)
Comparative genomic hybridization by array (6)
Ribo-seq (5)
RIP-seq (4)
Genotyping by array (3)
RNA-seq of non coding RNA (3)
Cell line - High-throughput sequencing (2)
ATAC-seq (2)
Hi-C (2)
Unknown experiment type (1)
Two-color microarray (1)
MeDIP-seq (1)
Translation profiling (1)
Animal - High-throughput sequencing (1)
Trajectory (1)
Transcription profiling by tiling array (1)
ChIP-chip by array (1)
Spatial transcriptomics by high-throughput sequencing (1)
4C (1)
DNA-seq (1)
RNA-seq of coding RNA from single cells (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2022 (382)
2023 (368)
2021 (346)
2024 (300)
2025 (277)
2020 (277)
2019 (224)
2018 (202)
2016 (186)
2015 (170)
2017 (148)
2014 (133)
2013 (126)
2011 (112)
2012 (108)
2010 (83)
2009 (48)
2008 (44)
2026 (38)
2007 (21)
2006 (15)
2005 (10)
2002 (9)
2004 (5)
2000 (3)
1998 (3)
2003 (2)
1999 (2)
2001 (1)

Previous page
1 / 389
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 389
Next page

Sort by:

Relevance

Page size

C. elegans provide "milk" for their young

The nematode Caenorhabditis elegans exhibits rapid senescence that is promoted by the insulin/IGF-1 signaling (IIS) pathway via regulated processes that are poorly understood. IIS also promotes production of yolk for egg provisioning, which in post-reproductive animals continues, supported by destru...

ORGANISM(S): Caenorhabditis elegans

2022-02-17 | PXD025472 | Pride

Differential production of Type I IFN determines the reciprocal levels of IL-10 and proinflammatory cytokines produced by C57BL/6 and BALB/c macrophages

Pattern recognition receptors (PRR) detect microbial products and induce cytokines which shape the immunological response. Interleukin-12 (IL-12), tumor necrosis factor alpha (TNF-Î±) and IL-1Î² are proinflammatory cytokines which can be essential for resistance against infection, but if produced at...

ORGANISM(S): Mus musculus

2016-09-07 | E-GEOD-79809 | biostudies-arrayexpress

Transcription factor c-Maf is a checkpoint that programs macrophages in lung cancer.

Not available

S-EPMC7108920 | biostudies-literature

Ni(0)-promoted activation of C_sp² -H and C_sp² -O bonds.

Not available

S-EPMC8317657 | biostudies-literature

Phosphoproteomic Analysis of Lethal Castration Resistant Prostate Cancer Reveals Patient but not Metastatic Site Heterogeneity of Tyrosine Kinase Activation

Tissue lysis was performed as previously described (Drake, J.M., et al. Oncogene-specific activation of tyrosine kinase networks during prostate cancer progression. Proc Natl Acad Sci U S A 109, 1643-1648 (2012)) Briefly, greater than 300 mg of frozen tumor mass was homogenized and sonicated in urea...

ORGANISM(S): Homo sapiens (Human)

2013-11-21 | PXD000238 | Pride

Tyrosine phosphorylation Human Prostate cancer

Biological Properties and Absolute Configuration of Flavanones From Calceolaria thyrsiflora Graham.

Not available

S-EPMC7399337 | biostudies-literature

Discovery of a Family of Genomic Sequences Which Interact Specifically with the c-MYC Promoter to Regulate c-MYC Expression.

Not available

S-EPMC4995011 | biostudies-literature

Chromosome-level genome assembly and population genetic analysis of a near-threatened rosewood species (Dalbergia cultrata Pierre Graham ex Benth) provide insights into its evolutionary and cold stress responses.

Not available

S-EPMC10552272 | biostudies-literature