Guanidinium - OmicsDI

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Transcriptomics (625)
Unknown (619)
Proteomics (423)
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Repository

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Cancer (1)
S enteritidis (1)
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Technology Type

Mass Spectrometry (386)
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MSE (12)
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Instrument Platform

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2017 (33)
2019 (27)
2006 (21)
2005 (13)
2004 (6)
2003 (2)

CHEBI ID

CHEBI:194215 (1)
CHEBI:194213 (1)
CHEBI:194214 (1)
CHEBI:131417 (1)
CHEBI:136311 (1)
CHEBI:136322 (1)
CHEBI:136314 (1)
CHEBI:136310 (1)
CHEBI:136307 (1)
CHEBI:138471 (1)
CHEBI:134639 (1)
CHEBI:136068 (1)
CHEBI:134303 (1)
CHEBI:134579 (1)
CHEBI:88556 (1)
CHEBI:73127 (1)
CHEBI:90466 (1)
CHEBI:133656 (1)
CHEBI:136161 (1)
CHEBI:134266 (1)
CHEBI:136167 (1)
CHEBI:134240 (1)
CHEBI:71755 (1)
CHEBI:71754 (1)
CHEBI:134502 (1)
CHEBI:137912 (1)
CHEBI:72357 (1)
CHEBI:72353 (1)
CHEBI:104873 (1)
CHEBI:72895 (1)

Metabolite Name

PGP(GC)P(R)G(PE)PIPP (1)
PE(NH) (1)
Pyroglutamate (Oxoproline) (1)
PP (1)
PEH (1)
(QPQG)RPPHVPP (1)
PEKWV(GP)G(PE)PIPP (1)
VP (1)
PE(VSMAHAAWAL)DIPP (1)
TPPAGPDVGPR (1)
PEKW (1)
DG(38:6) (1)
Co(Q10) (1)
DG(16:0/14:0) (1)
TG(16:0/18:1/22:6) (1)
TG(18:0/18:0/20:3) (1)
TG(16:1/16:1/22:6) (1)
TG(16:0/18:1/20:4) (1)
TG(16:1/16:1/18:1) (1)
PC(40:1) (1)
PC(39:5) (1)
PC(30:0e) (1)
PC(29:0) (1)
PC(28:1) (1)
PC(32:1e) (1)
SM(d18:0/18:1) (1)
PE(31:1) (1)
PE(37:1) (1)
PE(39:1) (1)
PE(44:1) (1)

First Public Date

2014 (18)
2022 (6)
2013 (5)
2025 (4)
2024 (3)
2018 (3)
2023 (2)
2020 (2)
2026 (1)
2017 (1)
2016 (1)
2011 (1)

Classification

bacteria (6)

Modification

-17.026549 (4)
15.994915 (4)
42.010565 (4)
58.005479 (2)
+3amu) (1)
-18.010565 (1)
2x(15)N labeled L-lysine (1)
32.056407 (1)
3x(2)H labeled N6-acetyl-L-lysine (1)
4-tetrahydrothiazine-3-carboxylic acid (1)
45.029395 (1)
47.036105 (1)
56.026215 (1)
57.021464 (1)
59.036279 (1)

Study type

Transcription profiling by array (497)
RNA-seq of coding RNA (59)
Unknown experiment type (13)
Transcription profiling by tiling array (8)
Other (5)
RNA-seq of non coding RNA (5)
ChIP-chip by tiling array (4)
Cell line - High-throughput sequencing (4)
Transcription profiling by RT-PCR (3)
ChIP-seq (3)
Plant - High-throughput sequencing (2)
Animal - High-throughput sequencing (2)
Comparative genomic hybridization by array (2)
DNA-seq (2)
Methylation profiling by array (2)
RNA-seq of total RNA (2)
One-color microarray (1)
Human - High-throughput sequencing (1)
Plant - One-color microarray (1)
ChIP-chip by array (1)
CLIP-seq (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2010 (103)
2011 (101)
2012 (99)
2015 (74)
2009 (73)
2008 (71)
2013 (69)
2016 (63)
2014 (63)
2022 (58)
2025 (53)
2020 (53)
2007 (48)
2018 (47)
2021 (45)
2024 (40)
2019 (38)
2023 (35)
2017 (33)
2006 (26)
2005 (23)
2004 (10)
2026 (6)
2003 (3)
2001 (3)
2002 (2)
2000 (2)
1999 (1)
1973 (1)

Lab affiliation

University of Vienna, Faculty of Chemistry, Department of Analytical Chemistry (33)
Department of Chemistry & Chemical Biology, Northeastern University (14)
Northeastern University (10)
Globe Institute, University of Copenhagen, Denmark (3)
Institute of Virology, Technical University of Munich, Munich, Germany. (3)
Leibniz-Institut für Analytische Wissenschaften – ISAS – e.V. (3)
Military Health Institute, Prague, Czech Republic (3)
Molecular Genetics, RPTU Kaiserslautern, Germany (3)
Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Barcelona, Spain. (2)
Chloé Martens, Ph.D Chercheuse Qualifiée - FRS.FNRS Group Leader Structure and Function of Biological Membranes - Chemistry Department chloemartenslab.com - sfmb.ulb.be Phone :+32 2 650 53 83 Université Libre de Bruxelles - Campus Plaine. Building BC, Room 1C4 110 - Boulevard du Triomphe, Accès 2 1050 Brussels - Belgium (2)
Department of Biology II and Center for Integrated Protein Science Munich (CIPSM), Ludwig-Maximilians-Universität München, Planegg-Martinsried, Germany (2)
Department of Chemistry & Chemical biology, Northeastern University (2)
Department of Microbiology and Immunology, University of Melbourne at the Peter Doherty Institute for Infection and Immunity, Parkville, Victoria 3010, Australia (2)
Department of Urology, University of California San Francisco (2)
European Molecular Biology Laboratory, Meyerhofstrasse 1, 69117 Heidelberg, Germany. (2)
Faculty of Chemistry, Aalen University, Aalen, Germany (2)
Forschungszentrum Juelich GmbH ZEA-3 Analytics Wilhelm-Johnen-Str D-52425 Juelich Germany (2)
Harry Perkins Institute of Medical Research and ARC Centre of Excellence in Synthetic Biology, QEII Medical Centre, Nedlands, Western Australia 6009, Australia (2)
Head of Proteomics (2)
Immunopathology of Virus Infections Institute of Virology Technical University of Munich Munich, Germany (2)
Inserm U1016, Institut Cochin, 24 rue du Faubourg Saint-Jacques, 75014 PARIS, FRANCE. (2)
Institut Pasteur Unité des Interactions Bactéries-Cellules, Inserm U604, INRA USC2020 25 rue du Dr. Roux 75015 Paris France (2)
Institute of Virology - Viral Immunopathology, Faculty of Medicine, Technical University Munich (2)
Kobilka Institute of Innovative Drug Discovery, School ofMedicine, The Chinese University of Hong Kong, Shenzhen, China, 518172 (2)
Max Planck Institute for Molecular Biomedicine Bioanalytical Mass Spectrometry Röntgenstr. 20 48149 Münster Germany (2)
Max Planck Institute for Molecular Genetics, Berlin, Germany (2)
Molecular Structure of Cell Signalling Laboratory, The Francis Crick Institute, 1 Midland Road, London, NW1 1AT, UK (2)
Natural History Museum of Denmark University of Copenhagen, Øster Voldgade 5–7, 1350 Copenhagen, Denmark (2)
Protein Biogenesis Lab, The Francis Crick Institute, 1 Midland Road, London, NW1 1AT (2)
Proteomics program, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, 2200 Copenhagen, Denmark (2)

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Proteomic Profiling of HEK293-F cell and human peripheral blood neutrophil proteins extracted by conventional direct extraction and phenol-guanidinium isothiocyanate (P/GTC)-based extraction methods

To evaluate the performance of the phenol-guanidinium isothiocyanate (P/GTC)-based extraction method in proteomic analysis, we performed proteome analysis from HEK293-F cell and human peripheral blood neutrophil proteins extracted by the P/GTC-based extraction and conventional direct extraction meth...

ORGANISM(S): Homo Sapiens (human)

2019-10-28 | PXD011487 | JPOST Repository

Integrative analysis of genomics and proteomics data on clinical breast cancer tissue specimens extracted with acid guanidinium thiocyanate-phenol-chloroform

Acid guanidinium thiocyanate, phenol and chloroform extraction (AGPC) is a commonly used procedure to extract RNA from fresh frozen tissues and cell lines. In addition, DNA and proteins can be recovered, which makes AGPC an attractive source for integrative analysis on tissues of which little materi...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2017-03-29 | MSV000080789 | MassIVE

Time-Dependent DNA Origami Denaturation by Guanidinium Chloride, Guanidinium Sulfate, and Guanidinium Thiocyanate.

Not available

S-EPMC9368935 | biostudies-literature

Integrative analysis of genomics and proteomics data on clinical breast cancer tissue specimens extracted with acid guanidinium thiocyanate-phenol-chloroform

ORGANISM(S): Homo sapiens (Human)

2016-06-24 | PXD001533 | Pride