Guo Yu Y - OmicsDI

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Unknown (5629)
Proteomics (204)
Metabolomics (34)
Transcriptomics (30)
Genomics (13)
Multiomics (4)
Models (2)
Other (1)

Organisms

Acidithiobacillus ferrooxidans ATCC 53993 (104)
Aerococcus urinae NBRC 15544 = CCUG 36881 (104)
Allexis (104)
Arabidopsis thaliana (104)
Homo sapiens (92)
Mus musculus (17)
Rattus norvegicus (3)
cellular organisms (2)
Apis mellifera (2)
Oryza sativa Japonica Group (2)
Arabidopsis thaliana (2)
Drosophila melanogaster (2)
Grapholita molesta (2)
Oryza rufipogon (1)
Brassica oleracea (1)
Tomato yellow leaf curl China virus (1)
Bombyx mori (1)
Clonorchis sinensis (1)
Citrus sinensis (1)
Saccharomyces cerevisiae (1)
Danio rerio (1)
Beta vulgaris subsp. vulgaris (1)
Bos taurus (1)
Brassica napus (1)
Mus (1)
Olivierus martensii (1)
Oryctolagus cuniculus (1)
Prunus avium (1)
Pseudomonas aeruginosa PAO1 (1)
Severe acute respiratory syndrome coronavirus 2 (1)

Organisms

Mus musculus (1)

Repository

pride (104)
iProX (90)
biostudies-arrayexpress (37)
MetaboLights (33)
EGA (5)
MassIVE (4)
PeptideAtlas (4)
BioModels (2)
GNPS (1)
GPMDB (1)
jPOST (1)
PAXDB (1)
ENA (1)

Tissue

Cell culture (23)
Plant cell (13)
Testis (8)
Liver (5)
Permanent cell line cell (5)
Others (4)
Epithelial cell (4)
Flower (4)
Leaf (4)
Lung (4)
Whole body (4)
Shoot (3)
Blood cell (2)
Blood plasma (2)
Brain (2)
Byssus (2)
Epididymal white adipose tissue (2)
Hepatocyte (2)
Kidney (2)
A549-CR cell (1)
Artery (1)
B-cell lymphoma cell (1)
Blood (1)
Cell line cell (1)
Cell suspension culture (1)
Cerebral cortex glial cell (1)
Colon (1)
Colon epithelial cell (1)
Corolla (1)
Early embryonic cell (1)

Disease

Colon cancer (4)
Brain cancer (3)
Breast cancer (3)
Acute leukemia (2)
Malignant neoplasm of ovary (2)
Prostate adenocarcinoma (2)
Not Available (1)
Cervix carcinoma (1)
Diffuse gastric cancer (1)
IgA glomerulonephritis (1)
Kidney cancer (1)
Liver cancer (1)
Lung cancer (1)
Lung carcinoma (1)
Lung mixed small cell and squamous cell carcinoma (1)
Lymphoma (1)
Multiple myeloma (1)
Non-small cell lung carcinoma (1)
Obesity (1)
Ovarian cancer (1)
Prostate cancer (1)
Pulmonary alveolar microlithiasis (1)
Renal cell carcinoma (1)
Severe acute respiratory syndrome (1)
Skin amelanotic melanoma (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (104)
Shotgun proteomics (47)
Mass spectrometry (29)
Bottom-up proteomics (15)
Data-dependent acquisition (9)
Gel-based experiment (9)
Affinity purification coupled with mass spectrometry proteomics (8)
Data-independent acquisition (6)
SWATH MS (6)
Top-down proteomics (6)
NMR spectroscopy (3)
Mass spectrometry imaging (3)
Proteogenomics (3)
AB SOLiD System 3.0 (1)
Mass spectrometry assay (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
DiaPASEF (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (16)
Liquid Chromatography MS - positive - reverse phase (14)
LTQ Orbitrap Elite (3)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (3)
API 4000 QTRAP (AB Sciex) (3)
Liquid Chromatography MS - alternating - reverse phase (3)
LTQ Orbitrap Velos Pro (2)
TSQ Quantum XLS (Thermo Scientific) (2)
Agilent 5975E GC/MSD (Agilent) (2)
Nuclear Magnetic Resonance (NMR) - (2)
Liquid Chromatography MS - alternating - hilic (2)
Liquid Chromatography MS - negative - hilic (2)
Liquid Chromatography MS - positive - hilic (2)
Instrument (1)
LTQ (1)
TripleTOF 5600 (1)
Quattro micro API (Waters) (1)
Liquid Chromatography MS - alternating – hilic (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
Liquid Chromatography MS - (1)
Bruker (1)
Exactive (Thermo Scientific) (1)
LTQ FT (1)
QExactive (1)

Publication Date

2022 (44)
2021 (35)
2023 (29)
2024 (27)
2025 (27)
2026 (22)
2020 (22)
2019 (19)
2014 (14)
2018 (8)
2010 (7)
2011 (6)
2012 (5)
2016 (3)
2015 (3)
2017 (3)
2013 (2)
2007 (1)

UNIPROT ID/AC

P17676 (2)
P15260 (2)
Q06124 (2)
P62136 (2)
P67775 (2)
Q07889 (2)
P08887 (2)
P40189 (2)
P01579 (2)
O15524 (2)
O14543 (2)
P42224 (2)
P40763 (2)
O60674 (2)
P23458 (2)
P28482 (2)
Q02750 (2)
P04049 (2)
P01112 (2)
P05231 (2)
P62993 (2)
1FEH1_WHEAT (1)
4565.EPlTAEP00000010002 (1)
4565.EPlTAEP00000010027 (1)
4565.EPlTAEP00000010105 (1)
4565.EPlTAEP00000010109 (1)
4565.EPlTAEP00000010115 (1)
4565.Traes_1AL_00485097A.2 (1)
4565.Traes_1AL_00744EBC6.2 (1)
4565.Traes_1AL_0121566F8.1 (1)

ENSEMBL ID

ENSG00000170477 (4)
ENSG00000147251 (3)
ENSG00000247315 (3)

CHEBI ID

CHEBI:16704 (16)
CHEBI:16919 (16)
CHEBI:17368 (15)
CHEBI:15891 (14)
CHEBI:16359 (13)
CHEBI:17509 (13)
CHEBI:16856 (13)
CHEBI:15741 (13)
CHEBI:17154 (13)
CHEBI:16335 (13)
CHEBI:17596 (13)
CHEBI:16708 (12)
CHEBI:17620 (12)
CHEBI:16411 (12)
CHEBI:17015 (12)
CHEBI:16750 (12)
CHEBI:15940 (12)
CHEBI:15354 (12)
CHEBI:17748 (11)
CHEBI:16610 (11)
CHEBI:16393 (11)
CHEBI:17750 (11)
CHEBI:17568 (11)
CHEBI:16450 (11)
CHEBI:16027 (11)
CHEBI:17295 (11)
CHEBI:16828 (11)
CHEBI:16811 (10)
CHEBI:55328 (10)
CHEBI:17821 (10)

Metabolite Name

Creatine (10)
Taurine (8)
Hypoxanthine (8)
Adenosine (7)
Thymidine (7)
Inosine (7)
Valine (6)
Benzaldehyde (6)
Benzoic acid (6)
Spermidine (6)
Cytosine (6)
Guanosine (6)
Leucine (5)
Lactose (5)
Galactose (5)
Betaine (5)
Thymine (5)
Pyridoxine (5)
Phosphocholine (5)
Acetylcarnitine (5)
Indole (5)
Choline (5)
Taurocholic acid (5)
Cholic acid (5)
Pimelic acid (5)
Arachidonic acid (5)
Niacinamide (5)
Glutathione (5)
N-(1-Deoxy-1-fructosyl)phenylalanine (5)
Melatonin (5)

First Public Date

2018 (1)

Modelling Approach

Ordinary differential equation model (2)

Lab affiliation

Alkali Soil Natural Environmental Science Center, Northeast Forestry University, Key Laboratory of Saline-alkali Vegetation Ecology Restoration in Oil Field, Ministry of Education, Harbin 150040, China (4)
Peking University (3)
Center for Stem Cell Biology and Tissue Engineering, Key Laboratory for Stem Cells and Tissue Engineering, Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, China. (2)
Department of Chemistry, University of California, Riverside (2)
ETH Zurich (2)
Guangdong Key Laboratory for Innovative Development and Utilization of Forest Plant Germplasm, College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China (2)
Guangdong Pharmaceutical University (2)
Institute of Reproductive Medicine, Medical School, Nantong University, Nantong 226001, China (2)
Shandong Academy of Agricultural Sciences, Jinan, Shandong, China (2)
Shanghai Institute of Thoracic Oncology, Shanghai Chest Hospital, Shanghai Jiao Tong University, Shanghai 200030 (2)
State Key Laboratory of Medical Molecular Biology, Department of Biochemistry and Molecular Biology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College, Beijing 100005, China (2)
State Key Laboratory of Medical Molecular Biology, Department of Biochemistry and Molecular Biology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College, Beijing 100005, China. (2)
1 Cancer Institute, Xuzhou Medical University, Xuzhou, Jiangsu, China. 2 Center of Clinical Oncology, The Affiliated Hospital of Xuzhou Medical University, Xuzhou, China. 3 State Key Laboratory Jiangsu Center for the Collaboration and Innovation of Cancer Biotherapy, Cancer Institute, Xuzhou Medical University, Xuzhou, Jiangsu, China. (1)
1 Department of General Surgery, The 306th Hospital of PLA-Peking University Teaching Hospital, Beijing 100101, China 2 Department of General Surgery, Strategic Support Force Medical Center, Beijing 100101, China (1)
1, Department of Biology, Institute of Molecular Systems Biology, ETH, Zurich, Switzerland 2, Faculty of Science, University of Zurich, Zurich, Switzerland (1)
1Department of Pathophysiology, Key Laboratory of Cell Differentiation and Apoptosis of Chinese Ministry of Education, Shanghai Jiao Tong University School of Medicine (SJTU-SM), Shanghai 200025, China. 2Institute of Health Sciences, Shanghai Institutes for Biological Sciences of Chinese Academy of Sciences and SJTU-SM, Shanghai 200025, China. (1)
1Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, NC 27599, USA 2Department of Biochemistry and Biophysics, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, NC 27599, USA 3Curriculum in Genetics and Molecular Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA (1)
1Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA 2Department of Biochemistry and Biophysics, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA 5Curriculum in Genetics and Molecular Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA 8Department of Pharmacology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA (1)
2 College of Horticulture, South China Agricultural University, Guangzhou 510642, China (1)
Advanced Water Management Centre, The University of Queensland (1)
Advanced Water Management Centre, The University of Queensland, St. Lucia, Brisbane, QLD 4072, Australia (1)
BGI-Shenzhen,China (1)
Beijing Academy of Agriculture and Forestry Sciences (1)
Biotechnological Institute of Chinese Materia Medica, Jinan University, Guangzhou 511443, China (1)
Cancer Institute, Fudan University Shanghai Cancer Center (1)
Center of Growth, Metabolism and Aging, Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, 610064, China (1)
College of Biology, Hunan University (1)
College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China (1)
College of Life Science and Technology, Jinan University, Guangzhou 510632, China; (1)
College of Marine Life Sciences, Ocean University of China, Qingdao, China (1)

IsPrivate

False (2)

Study type

RNA-seq of coding RNA (13)
Transcription profiling by array (12)
Methylation profiling by high throughput sequencing (6)
RNA-seq of non coding RNA (4)
Comparative genomic hybridization by array (1)
ChIP-seq (1)

Release Date

2022 (866)
2025 (843)
2023 (733)
2024 (730)
2021 (625)
2020 (411)
2019 (294)
2018 (256)
2017 (203)
2016 (150)
2026 (134)
2015 (131)
2014 (102)
2012 (57)
2013 (48)
2011 (34)
2010 (27)
2009 (6)
2008 (5)
2006 (3)
2007 (2)
2005 (2)
2004 (2)
2002 (1)
2000 (1)

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The complete chloroplast genome of Epimedium qingchengshanense G. Y. Zhong et B. L. Guo (Berberidaceae), an endangered species endemic to China.

Not available

S-EPMC7748797 | biostudies-literature

Molecular mechanism of Dang-Shen-Yu-Xing decoction against Mycoplasma bovis pneumonia based on network pharmacology, molecular docking, molecular dynamics simulations and experimental verification.

Not available

S-EPMC11458528 | biostudies-literature

Metabolomics Response to Drought Stress in Morus alba L. Variety Yu-711.

Not available

S-EPMC8400578 | biostudies-literature

Proteomic analysis of Dpy19l2-deficient human globozoospermia reveals multiple molecular defects

Globozoospermia is a severe teratozoospermia characterized by round-headed spermatozoa without acrosomes, resulting in male infertility. The clinical treatment of globozoospermia involves primarily intracytoplasmic sperm injection because of the low fertilization rate. The deletion of Dpy19l2 is kno...

ORGANISM(S): Homo sapiens (Human)

2019-08-15 | PXD012302 | Pride

U-Shaped Association between Plasma Manganese Levels and Type 2 Diabetes.

Not available

S-EPMC5132633 | biostudies-literature

Comprehensive mutation screening for 10 genes in Chinese patients suffering very early onset inflammatory bowel disease.

Not available

S-EPMC4917618 | biostudies-literature

Activation of ROS/MAPKs/NF-κB/NLRP3 and inhibition of efferocytosis in osteoclast-mediated diabetic osteoporosis.

Not available

S-EPMC6902677 | biostudies-literature

Sequence-based mutation patterns at 41 Y chromosomal STRs in 2 548 father-son pairs.

Not available

S-EPMC10445670 | biostudies-literature

Exploring the Relationship Between the Size and Diverticular Number of Carpal Gland in Four Pig (<i>Sus Scrofa</i>) Populations.

Not available

S-EPMC11591263 | biostudies-literature

Tet and TDG Mediate DNA Demethylation Essential for MET in Somatic Cell Reprogramming

Tet-mediated DNA oxidation is a new type of epigenetic modification in mammals and its role in the regulation of cell fate transition remains poorly understood. Here, we derive mouse embryonic fibroblasts (MEFs) deleted in all three Tet genes and examine their capability to be reprogrammed into iPS ...

ORGANISM(S): Mus musculus

2014-02-19 | E-GEOD-52741 | biostudies-arrayexpress

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