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MetabolomicsCross-feeding and co-degradation within a bacterial consortium dominated by challenging-to-cultivate Leucobacter sp. HA-1 enhances sulfonamides degradation

Background: The use of sulfonamides (SAs) caused residual pollution in the environment. Bacteria play an important role in the degradation of sulfonamide antibiotics, and microbial consortium offers advantages over single bacterium. However, the complex degradation process and interaction mechani...

2024-11-08 | MTBLS11473 | MetaboLights
TranscriptomicsComparative transcriptomics of the model entomopathogenic fungi Metarhizium anisopliae and M. acridum during infection on different insects
We used RNA-Seq to compare transcriptional responses of M. anisopliae and M. acridum to infection of the optically clear hind wings of adult locusts and cockroaches. It was calculated that >82% of predicted M. anisopliae genes and >88% of predicted M. acridum genes were expressed during pre-penetrat...
ORGANISM(S): Metarhizium acridum 
2011-01-31 | E-GEOD-24938 | biostudies-arrayexpress
MetabolomicsP4HA1 knockdown in the breast cell line MDA231 (part III)
Not available
ORGANISM(S): Homo sapiens 
ST001129 | MetabolomicsWorkbench
MetabolomicsP4HA1 knockdown in the breast cell line MDA231 Gln metabolism (part V)
Not available
ORGANISM(S): Homo sapiens 
ST001138 | MetabolomicsWorkbench
TranscriptomicsHigh salt primes a specific activation state of macrophages, M(Na)
Purpose: Investigate effects of high salt on human macrophage activation Methods: Human monocytes-derived macrophages were treated by additional 51mM NaCl for 24 hours (NaCl groups) or not (Control groups). mRNA profiles were generated by RNA-Seq, in triplicate, using Ion proton（Life tech). qRT–PCR ...
ORGANISM(S): Homo sapiens 
2015-09-23 | E-GEOD-68482 | biostudies-arrayexpress
TranscriptomicsTHOC5, a member of the mRNA export complex, is essential for hematopoiesis in vivo and is required for CSF-1 induced macrophage differentiation
THOC5, a member of the mRNA export complex, is essential for hematopoiesis in vivo and is required for CSF-1 induced macrophage differentiation, thereby playing a key role in the mRNA export of immediate early genes induced by CSF-1 stimulation. Hematopoiesis, growth, differentiation, and commitment...
ORGANISM(S): Mus musculus 
2013-12-24 | E-GEOD-41170 | biostudies-arrayexpress
GenomicsGenome-wide analysis of H3.3 dissociation in mouse embryonic stem cells
Using Tet-inhibited expression of epitope-tagged H3.3 combined with ChIP-Seq we undertook genome-wide measurements of H3.3 dissociation rates across the ESC genome and examined the relationship between H3.3-nucleosome turnover and ESC-specific transcription factors, chromatin modifiers and epigeneti...
ORGANISM(S): Mus musculus 
2015-05-14 | E-GEOD-63641 | biostudies-arrayexpress
TranscriptomicsMetabolic programs orchestrated by the activated Ha-ras and M-NM-2-catenin oncoproteins in mouse liver tumors [mRNA]
The process of hepatocarcinogenesis in the diethylnitrosamine (DEN) initiation/phenobarbital (PB) promotion mouse model involves the selective clonal outgrowth of cells harboring oncogene mutations in Ha-ras, B-raf, or Ctnnb1. Here, we have characterized mouse liver tumors harboring either Ctnnb1 or...
ORGANISM(S): Mus musculus 
2014-02-10 | E-GEOD-51355 | biostudies-arrayexpress
UnknownEnhanced osteogenic proliferation and differentiation of human adipose-derived stem cells on a porous n-HA/PGS-M composite scaffold.
Not available
S-EPMC6538636 | biostudies-literature
GenomicsThe impact of mab_1638 on the M. abscessus transcriptome [ChIP-seq]
The impact of mab_1638 on the M. abscessus transcriptome [ChIP-seq]
PRJNA1214291 | ENA
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