Half-life - OmicsDI

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Database for mRNA Half-Life of 19,977 Genes Obtained by DNA Microarray Analysis of Pluripotent and Differentiating Mouse

Degradation of mRNA is one of the key processes that control the steady-state level of gene expression. However, the rate of mRNA decay for the majority of genes is not known. We successfully obtained the rate of mRNA decay for 19 977 non-redundant genes by microarray analysis of RNA samples obtaine...

ORGANISM(S): Mus musculus

2010-05-16 | E-GEOD-13609 | biostudies-arrayexpress

Cell cycle mRNA half-life profiling.

PRJNA950409 | ENA

Transcription profiling of human B-cells and mouse NIH-3T3 cells for analysis of RNA synthesis, abundance and decay

This SuperSeries is composed of the following subset Series:; GSE9973: Half-life determination for human B-cells (BL41); GSE9975: newly transcribed RNA (nt-RNA) for IFN alpha and gamma time course; GSE9977: Expression data from NIH-3T3 cells treated with mock, 100 U/ml IFN alpha or 100 U/ml gamma fo...

ORGANISM(S): Homo sapiens

2009-10-10 | E-GEOD-10026 | biostudies-arrayexpress

RNA half-life analysis after transcriptional blocking with actinomycin D

Transcriptional profiling of HeLa cells treated with actinomycin D for increasing amounts of time. Relative abundance to control cells was used to estimate the half-life of lncRNAs. Two-condition experiment, actinomycin D-treated vs. untreatted HeLa cells. Biological replicates: 2. Technical replic...

ORGANISM(S): Homo sapiens

2015-06-30 | E-GEOD-62963 | biostudies-arrayexpress

Retapamullin and Chloramphenicol treated mRNA half-life profiling.

PRJNA950406 | ENA

Expression data from RNA half-life experiments in Prochlorococcus

RNA decay was measured in Prochlorococcus after inhibition of transcription by rifampicin using customized Affymetrix gene expression arrays. RNA turnover plays an important role in the gene regulation of microorganisms and influences their speed of acclimation to environmental changes. We investiga...

ORGANISM(S): Prochlorococcus marinus subsp. pastoris str. CCMP1986

2010-05-16 | E-GEOD-17075 | biostudies-arrayexpress

RNA half-life seq in HUVECs upon DDX24 knockdown

PRJNA1078324 | ENA

BR-body mutant mRNA half-life profiling.

PRJNA551694 | ENA

Explore the effect of m6A reader YTHDF1 on RNAs half-life

PRJNA602480 | ENA

Cell cycle mRNA half-life profiling.

mRNA half-life profiling in the bacterium Caulobacter crescentus was performed in synchronized cells collected from different stages of the cell cycle including swarmer cells, stalk cells (45 min post synchrony), and predivisional cells (90 min post synchrony). For each cell population, transcriptio...

ORGANISM(S): Caulobacter vibrioides

2023-04-03 | GSE228593 | GEO

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