Sort   by:  
 Page size 
TranscriptomicsMeasurement of mRNA decay in exponentially growing cultures of the extremely halophilic euryarchaeon Halobacterium salinarum NRC-1 after blocking transcription with actinomycin D
mRNA half-lives in exponentially growing cultures of the extremely halophilic euryarchaeon Halobacterium salinarum NRC-1
ORGANISM(S): Halobacterium salinarum 
2007-07-31 | E-MEXP-1088 | biostudies-arrayexpress
TranscriptomicsHalobacterium NRC-1 oxygen, light and pertubations
This SuperSeries is composed of the following subset Series: GSE7714: Halobacterium NRC-1 oxygen, light and phr1 perturbation GSE7715: Halobacterium NRC-1 oxygen, light and ura3 perturbation GSE7716: Halobacterium NRC-1 oxygen, light and phr1/phr2 perturbation GSE7717: Halobacterium NRC-1 oxygen, li...
ORGANISM(S): Halobacterium sp. NRC-1 
2008-01-02 | E-GEOD-7740 | biostudies-arrayexpress
TranscriptomicsHalobacterium salinarum NRC-1 growth curve
Halobacterium salinarum NRC-1 was grown in CM media, at 37oC in a waterbath with agitation of 125 rpm under constant light. Analysis of transcriptional changes during growth, in addition to mapping of transcriptome structure under the same conditions, provided interesting insights about regulatory l...
ORGANISM(S): Halobacterium sp. NRC-1 
2010-05-17 | E-GEOD-12977 | biostudies-arrayexpress
TranscriptomicsHalobacterium salinarum NRC-1 total RNA hybridization of TFBd overexpression versus Reference sample
Total RNA hybridizations of Halobacterium salinarum NRC-1 total RNA versus a strain overexpressing TFBd were compared to verify the transcriptome landscape changes. Comparison with TFBd binding sites localized using ChIP-chip data and MeDiChI algorithm (Reiss et al, 2008) allowed observation that TF...
ORGANISM(S): Halobacterium sp. NRC-1 
2010-05-17 | E-GEOD-15788 | biostudies-arrayexpress
TranscriptomicsHalobacterium NRC-1, H2O2 Stress Response
50mM H2O2 was added to mid-log phase Halobacterium NRC-1 cultures. After constant stress of H2O2 for 30 minutes, cultures were spun down and pellets were resuspended in same volume of GN101 media. Samples for RNA preparation were collected during recovery time points at 0, 10, 20, 30, 40, 60 and 120...
ORGANISM(S): Halobacterium sp. NRC-1 
2010-05-27 | E-GEOD-7610 | biostudies-arrayexpress
TranscriptomicsHalobacterium NRC-1 Diurnal experiment Light 2
The wild type strain of Halobacterium salinarium strain NRC-1 was used for the diel growth experiments. For experiment, cultures were started at an OD >> 0.001. Cultures were grown anaerobically at a temperature of 38° C under light:dark cycles (12:12 hrs) for 120 hours then grown under constant ...
ORGANISM(S): Halobacterium sp. NRC-1 
2010-05-27 | E-GEOD-7712 | biostudies-arrayexpress
TranscriptomicsHalobacterium NRC-1, EMS Stress Response
100mM EMS was added to mid-log phase Halobacterium NRC-1 cultures. After constant stress of EMS for 30 minutes, cultures were spun down and pellets were re-suspended in same volume of GN101 media. Cultures were then harvested by centrifugation and pellets were snap frozen on a dry-ice ethanol bath. ...
ORGANISM(S): Halobacterium sp. NRC-1 
2010-05-27 | E-GEOD-7609 | biostudies-arrayexpress
TranscriptomicsHalobacterium NRC-1 Diurnal experiment Dark 2
The wild type strain of Halobacterium salinarium strain NRC-1 was used for the diel growth experiments. Culturing from colony was done in a liquid Complete Medium (CM; at 42 ºC with shaking at 100 rpm). For experiment, cultures were started at an OD >> 0.001. Cultures were grown aerobically (sha...
ORGANISM(S): Halobacterium sp. NRC-1 
2010-05-27 | E-GEOD-7710 | biostudies-arrayexpress
TranscriptomicsHalobacterium NRC-1 Diurnal experiment Dark 3
The wild type strain of Halobacterium salinarium strain NRC-1 was used for the diel growth experiments. Culturing from colony was done under constant light in a liquid Complete Medium (CM; at 37 ºC with shaking at 220 rpm). For experiment, cultures were started at an OD = 0.005. Cultures were gr...
ORGANISM(S): Halobacterium sp. NRC-1 
2010-05-27 | E-GEOD-7711 | biostudies-arrayexpress
TranscriptomicsMetabolic responses of the model archaeon Halobacterium sp. NRC-1 to oxygen limitation
As part of a comprehensive post-genomic investigation of the model archaeon Halobacterium sp. NRC-1, we used whole genome DNA microarrays to compare transcriptional profiles of cells grown anaerobically via arginine fermentation versus cells either respiring aerobically in the presence of oxygen or ...
ORGANISM(S): Halobacterium sp. NRC-1 
2012-11-06 | E-GEOD-38374 | biostudies-arrayexpress
Sort   by:  
 Page size