Hamilton Richard R

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Unknown (87)
Transcriptomics (17)
Proteomics (5)
Metabolomics (4)
Genomics (1)

Organisms

Danio rerio (11)
Homo sapiens (6)
Schizosaccharomyces pombe (1)
Salmo salar (1)
Gallus gallus (1)

Repository

biostudies-arrayexpress (18)
MetaboLights (4)
PAXDB (3)
pride (2)

Tissue

Epithelial cell (1)
Lung (1)
Trophoblast (1)

Disease

Disease free (1)

Technology Type

Mass spectrometry (2)
Mass Spectrometry (2)
Shotgun proteomics (2)
Mass spectrometry assay (1)
NMR spectroscopy (1)
NMR spectroscopy assay (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Gel-based experiment (1)
SRM/MRM (1)
SWATH MS (1)
Top-down proteomics (1)

Instrument Platform

Nuclear Magnetic Resonance (NMR) - (2)
Q Exactive (2)
NextSeq 500 (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2012 (5)
2010 (3)
2019 (3)
2023 (2)
2018 (2)
2013 (2)
2008 (2)
2024 (2)
2016 (1)
2011 (1)
2009 (1)
2006 (1)
2025 (1)
2022 (1)

UNIPROT ID/AC

143BA_DANRE (3)
143BB_DANRE (3)
A0A0G2L009_DANRE (3)
A0A0G2L1F5_DANRE (3)
A0A0R4IAH3_DANRE (3)
A0A0R4IB76_DANRE (3)
A0A0R4IBT7_DANRE (3)
A0A0R4IFK0_DANRE (3)
A0A0R4IG09_DANRE (3)
A0A0R4IGN3_DANRE (3)
A0A0R4IH35_DANRE (3)
A0A0R4IH79_DANRE (3)
A0A0R4IHT0_DANRE (3)
A0A0R4IK64_DANRE (3)
A0A0R4IKF0_DANRE (3)
A0A0R4IN76_DANRE (3)
A0A0R4INZ8_DANRE (3)
A0A0R4IP30_DANRE (3)
A0A0R4IPH2_DANRE (3)
A0A0R4IPV5_DANRE (3)
A0A0R4ITL8_DANRE (3)
A0A0R4IV67_DANRE (3)
A0A0R4IVC8_DANRE (3)
A0A0R4IVF6_DANRE (3)
A0A140LGU1_DANRE (3)
A0A1L1QZF2_DANRE (3)
A0A2R8QA71_DANRE (3)
A0A2R8QDV2_DANRE (3)
A0A2R8QUY1_DANRE (3)
A0A2R8RU89_DANRE (3)

CHEBI ID

CHEBI:10072 (2)
CHEBI:10362 (2)
CHEBI:132948 (2)
CHEBI:133001 (2)
CHEBI:133032 (2)
CHEBI:133057 (2)
CHEBI:133112 (2)
CHEBI:133119 (2)
CHEBI:133139 (2)
CHEBI:133141 (2)
CHEBI:133144 (2)
CHEBI:133148 (2)
CHEBI:133176 (2)
CHEBI:133181 (2)
CHEBI:133183 (2)
CHEBI:133185 (2)
CHEBI:133460 (2)
CHEBI:133530 (2)
CHEBI:133532 (2)
CHEBI:133672 (2)
CHEBI:134538 (2)
CHEBI:137228 (2)
CHEBI:138529 (2)
CHEBI:145961 (2)
CHEBI:145970 (2)
CHEBI:149655 (2)
CHEBI:15354 (2)
CHEBI:153787 (2)
CHEBI:15428 (2)
CHEBI:15676 (2)

Metabolite Name

1,3,7-trimethylurate (2)
1,3-dimethylurate (2)
1,3-propanediol (2)
1,7-dimethylurate (2)
1-(1-enyl-palmitoyl)-GPE (P-16:0)* (2)
1-(1-enyl-stearoyl)-GPE (P-18:0)* (2)
1-methyl-4-imidazoleacetate (2)
1-methylguanidine (2)
1-methylnicotinamide (2)
1-methylurate (2)
1-palmitoyl-2-linoleoyl-GPC (16:0/18:2) (2)
1-palmitoyl-2-oleoyl-GPC (16:0/18:1) (2)
1-palmitoyl-GPC (16:0) (2)
1-palmitoyl-GPE (16:0) (2)
1-stearoyl-2-oleoyl-GPC (18:0/18:1) (2)
2'-O-methyluridine (2)
2'-deoxycytidine (2)
2'-deoxyguanosine (2)
2'-deoxyinosine (2)
2'-deoxyuridine (2)
2,3-dihydroxyisovalerate (2)
2-aminophenol (2)
2-hydroxy-3-methylvalerate (2)
2-hydroxy-4-(methylthio)butanoic acid (2)
2-hydroxyacetaminophen sulfate* (2)
2-hydroxybutyrate/2-hydroxyisobutyrate (2)
2-hydroxyglutarate (2)
2-hydroxymyristate (2)
2-hydroxynervonate* (2)
2-hydroxypalmitate (2)

Study type

Transcription profiling by array (7)
Comparative genomic hybridization by array (6)
Unknown experiment type (2)
ChIP-chip by tiling array (1)
ChIP-seq (1)
RNA-seq of coding RNA (1)

Release Date

2021 (12)
2022 (11)
2023 (9)
2020 (9)
2025 (8)
2012 (7)
2024 (7)
2016 (6)
2019 (6)
2015 (6)
2014 (4)
2013 (4)
2010 (4)
2018 (3)
2017 (3)
2011 (2)
2008 (2)
2009 (1)
2006 (1)

Lab affiliation

Childrens Hospital of Pennsylvania (1)
Division of Immunology, Department of Pathology, University of Cambridge (1)

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Microarray transcriptional analysis of leptin signaling knockdown and rescue in 72-hour post fertilization zebrafish

The effects of leptin-A morpholino oligonucleotides and recombinant leptin-A on embryonic zebrafish transcriptome content were evaluated using Affymetrix 1.1 ST gene array strips.

ORGANISM(S): Danio rerio

2018-04-02 | E-MTAB-6548 | biostudies-arrayexpress

Transcription profiling time series of zebrafish hearts treated with dioxin (TCDD)

For analysis of gene expression changes in the zebrafish larvae heart in response to TCDD exposure, three replicate samples of heart tissue were collected at 73, 74, 76 and 84 hours post fertilization from larvae exposed to 1 ng/ml TCDD or vehicle from 72 - 73 hours post fertilization. For analysis ...

ORGANISM(S): Danio rerio

2006-06-29 | E-MEXP-758 | biostudies-arrayexpress

Economic evaluation alongside the Probiotics to Prevent Severe Pneumonia and Endotracheal Colonization Trial (E-PROSPECT): study protocol.

Not available

S-EPMC7322334 | biostudies-literature

ECG Triggering in Ultra-High Field Cardiovascular MRI.

Not available

S-EPMC6024401 | biostudies-literature

Fecal microbiota transplantation plus anti-PD-1 immunotherapy in advanced melanoma: a phase I trial

Fecal microbiota transplantation (FMT) represents a potential strategy to overcome resistance to immune checkpoint inhibitors in patients with refractory melanoma; however, the role of FMT in first-line treatment settings has not been evaluated. We conducted a multicenter phase I trial combining ...

2025-02-27 | MTBLS711 | MetaboLights

Drug Overdoses During the COVID-19 Pandemic Among Recently Homeless Individuals.

Not available

S-EPMC9111216 | biostudies-literature

Gene expression profiles in zebrafish brain after acute exposure to domoic acid at symptomatic and asymptomatic doses

Domoic acid (DA) is a neuroexcitatory amino acid that is naturally produced by some marine diatom species of the genus Pseudo-nitzschia. Ingestion of DA-contaminated seafood by humans results in a severe neurotoxic disease known as amnesic shellfish poisoning (ASP). Clinical signs of ASP include s...

ORGANISM(S): Danio rerio

2009-07-06 | E-GEOD-12140 | biostudies-arrayexpress

Transcriptional impact of organophosphate and metal mixtures on olfaction: copper dominates the chlorpyrifos-induced response in adult zebrafish.

Chemical exposures in fish have been linked to loss of olfaction leading to an inability to detect predators and prey and decreased survival. However, the mechanisms underlying olfactory neurotoxicity are not well characterized, especially in environmental exposures which involve chemical mixtures. ...

ORGANISM(S): Danio rerio

2013-05-21 | E-GEOD-47039 | biostudies-arrayexpress

Small Marine Neurotoxin Elicits Common Antibody Response in Zebrafish and Sea Lions

The neurotoxic amino acid, domoic acid, is naturally produced by marine phytoplankton and presents a significant health threat to marine mammal and human populations. Currently, diagnostic tools to assess exposure are not available, yet concerns regarding health impacts associated with low-level re...

ORGANISM(S): Danio rerio

2013-01-03 | E-GEOD-34716 | biostudies-arrayexpress

High resolution data visualization and machine learning prediction of free chlorine residual in a green building water system.

Not available

S-EPMC11345929 | biostudies-literature

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114 Results

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