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TranscriptomicsExpression quantitative trait loci (eQTL) analysis of Brassica rapa under varying soil phosphorus (P) supplies
The aim of this study was to identify eQTL in Brassica rapa grown under altered soil phosphorus (P) supply, to understand better the genetic architecture of P-use efficiency (PUE) in plants. Recombinant inbred lines (RILs) of the BraIRRI mapping population were grown at adequate and growth-limiting ...
ORGANISM(S): Brassica rapa 
2011-06-29 | E-GEOD-27052 | biostudies-arrayexpress
TranscriptomicsCalcium and Magnesium responses in Brassica rapa
A mapping population of Brassica rapa (BraIRRI, IMB211xR500) was grown under four external calcium and magnesium concentrations in controlled conditions. RNA was extracted and hybridised to the Affymetrix Brassica Exon 1.0 ST array. The aim of the experiment was to identify cis- and trans- expressio...
ORGANISM(S): Brassica rapa 
2014-05-21 | E-GEOD-44185 | biostudies-arrayexpress
TranscriptomicsEctopic Hedgehog signalling causes cleft palate and defective osteogenesis
In this study, we have investigated the molecular basis of Shh signalling during development of the secondary palate and how CNCC patterning and fate is influenced by the Shh signalling network. Using a gain-of-function mouse model to activate Smoothened (R26SmoM2) signalling in the palatal mesenchy...
ORGANISM(S): Mus musculus 
2018-10-02 | E-MTAB-5518 | biostudies-arrayexpress
ProteomicsMesenchymal Stromal Cell secretome is affected by tissue source and donor age.
Variation in Mesenchymal Stromal Cell (MSC) function depending on their origin is problematic, as it may confound clinical outcomes of MSC therapy. Current evidence suggests that the therapeutic benefits of MSCs is primarily attributed to secretion of various biologically active factors (secretome)....
ORGANISM(S): Equus caballus (Horse) 
2024-01-26 | PXD039652 | Pride
Proteomics Donor Mesenchymal stromal cells Equine Secretome Age 
ProteomicsComparative genomic, proteomic and exoproteomic analyses of three Pseudomonas spp.part 6b
Bacteria that inhabit the rhizosphere of agricultural crops can have a beneficial effect on crop growth, including through the solubilisation and remineralisation of complex forms of phosphorus (P). However[1], our understanding of the bacterial proteomic response to P stress is limited. Here, exop...
ORGANISM(S): Pseudomonas putida (strain BIRD-1) 
2016-08-22 | PXD004065 | Pride
Phosphate Pseudomonas Gel-lc Secreted 
ProteomicsComparative genomic, proteomic and exoproteomic analyses of three Pseudomonas spp.Part 6a
Bacteria that inhabit the rhizosphere of agricultural crops can have a beneficial effect on crop growth, including through the solubilisation and remineralisation of complex forms of phosphorus (P). However [1], our understanding of the bacterial proteomic response to P stress is limited. Here, ex...
ORGANISM(S): Pseudomonas putida (strain BIRD-1) 
2016-08-22 | PXD004064 | Pride
Pseudomonas Exproteome 
ProteomicsComparative genomic, proteomic and exoproteomic analyses of three Pseudomonas spp. Part 5
Bacteria that inhabit the rhizosphere of agricultural crops can have a beneficial effect on crop growth, including through the solubilisation and remineralisation of complex forms of phosphorus (P). However[1], our understanding of the bacterial proteomic response to P stress is limited. Here, exop...
ORGANISM(S): Pseudomonas putida (strain BIRD-1) 
2016-08-22 | PXD003830 | Pride
Exoproteome pseudomonas putida bird pho mutant 
ProteomicsComparative genomic, proteomic and exoproteomic analyses of three Pseudomonas spp. - part 2
Bacteria that inhabit the rhizosphere of agricultural crops can have a beneficial effect on crop growth, including through the solubilisation and remineralisation of complex forms of phosphorus (P). However [1], our understanding of the bacterial proteomic response to P stress is limited. Here, ex...
ORGANISM(S): Pseudomonas fluorescens (strain SBW25) 
2016-08-22 | PXD003827 | Pride
Pseudomonas Exoproteome 
ProteomicsComparative genomic, proteomic and exoproteomic analyses of three Pseudomonas spp. Part 3
Bacteria that inhabit the rhizosphere of agricultural crops can have a beneficial effect on crop growth, including through the solubilisation and remineralisation of complex forms of phosphorus (P). However [1], our understanding of the bacterial proteomic response to P stress is limited. Here, ex...
ORGANISM(S): Pseudomonas stutzeri (Pseudomonas perfectomarina) 
2016-08-22 | PXD003828 | Pride
Exproptome Pseudomonas stutzeri 
ProteomicsComparative genomic, proteomic and exoproteomic analyses of three Pseudomonas spp. Part 1 resubmitted
Bacteria that inhabit the rhizosphere of agricultural crops can have a beneficial effect on crop growth, including through the solubilisation and remineralisation of complex forms of phosphorus (P). However[1], our understanding of the bacterial proteomic response to P stress is limited. Here, exop...
ORGANISM(S): Pseudomonas putida (strain BIRD-1) 
2016-08-22 | PXD003826 | Pride
Pseudomonas Exoproteome 
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