Hao P P - OmicsDI

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Unknown (4846)
Proteomics (287)
Transcriptomics (237)
Metabolomics (67)
Genomics (41)
Models (3)
Other (3)
Genomic (2)
Multiomics (2)

Organisms

Homo sapiens (236)
Mus musculus (119)
Arabidopsis thaliana (18)
Plasmodium falciparum (14)
Saccharomyces cerevisiae (14)
Rattus norvegicus (13)
Oryza sativa (10)
Candida albicans (7)
Danio rerio (4)
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 (3)
Streptococcus suis 05ZYH33 (3)
Oryza sativa Japonica Group (3)
Gallus gallus (3)
Sus scrofa (3)
Macaca fascicularis (2)
Klebsormidium nitens (1)
Populus cathayana (1)
Populus yunnanensis (1)
Deinococcus gobiensis (1)
Campylobacter (1)
Schistosoma japonicum (1)
Plasmodium knowlesi (1)
Bifidobacterium longum (1)
Escherichia coli BW25113 (1)
Columba livia (1)
Aspergillus fumigatus (1)
Schizosaccharomyces pombe (1)
Campylobacter jejuni (1)
Echinococcus granulosus (1)
Brassica oleracea var. italica (1)

Organisms

Mus musculus (1)

Repository

biostudies-arrayexpress (272)
pride (121)
iProX (65)
MetaboLights (64)
PeptideAtlas (64)
MassIVE (29)
jPOST (8)
EGA (4)
GNPS (3)
GPMDB (3)
BioModels (2)
dbGaP (2)
ENA (2)
Cell Collective (1)

Tissue

Liver (44)
Cell culture (30)
Whole body (7)
Brain (6)
Epithelial cell (6)
Blood (4)
Heart (4)
Kidney (4)
Plant cell (4)
Others (3)
Blood plasma (3)
Liver (3)
Macrophage (3)
Photosynthetic cell (3)
Urine (3)
Plasma Non-glyco (2)
Cell suspension culture (2)
Cerebrospinal fluid (2)
Fibroblast (2)
Monocyte (2)
Placenta (2)
Root (2)
Stem cell (2)
Testis (2)
Brain (1)
Anther (1)
Aorta thoracica (1)
B cell (1)
Blood platelet (1)
Blood serum (1)

Disease

Not Available (3)
Colon cancer (2)
Disease free (2)
Prostate adenocarcinoma (2)
Wounds and Injuries (2)
Normal (1)
Acute leukemia (1)
Brain glioblastoma multiforme (1)
Breast cancer (1)
Cancer (1)
Carcinoma (1)
Cardiovascular system disease (1)
Cervix carcinoma (1)
Heart failure (1)
Hydrocephalus (1)
Kidney disease (1)
Lung small cell carcinoma (1)
Lymphoma (1)
Non-small cell lung carcinoma (1)
Ovarian carcinoma (1)
Pancreatic ductal adenocarcinoma (1)
Prion disease (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (121)
Shotgun proteomics (67)
Mass spectrometry (43)
Bottom-up proteomics (21)
Mass spectrometry assay (16)
Affinity purification coupled with mass spectrometry proteomics (12)
Data-dependent acquisition (9)
Data-independent acquisition (9)
SWATH MS (7)
NMR spectroscopy (6)
Top-down proteomics (4)
Proteogenomics (2)
Illumina HiSeq 2000 (1)
Affinity proteomics (1)
All-ion fragmentation (1)
DiaPASEF (1)
Gel-based experiment (1)
Immunopeptidomics (1)
Mass spectrometry imaging (1)

Instrument Platform

DNBSEQ-T7 (12)
Illumina NovaSeq 6000 (10)
BGISEQ-500 (9)
LTQ (9)
Orbitrap Fusion Lumos (8)
Q Exactive (4)
Q Exactive HF-X (4)
Instrument (3)
LTQ Orbitrap Velos (3)
MA900, Sony (2)
10x Chromium Controller (2)
Illumina MiSeq (2)
NextSeq 500 (2)
10X Chromium Controller (1)
Illumina NovaSeq X (1)
NextSeq 2000 (1)
Illumina HiSeq 2000 (1)
Illumina HiSeq 4000 (1)
MicrOTOF-Q II (1)
Q Exactive Plus (1)
TSQ Quantis (1)
6550 iFunnel Q-TOF LC/MS (1)
Orbitrap Ascend (1)
Orbitrap Eclipse (1)
Orbitrap Fusion ETD (1)
Q Exactive HF (1)
Q-Exactive H-FX (1)
TripleTOF 5600 (1)
TripleTOF 6600 (1)
Velos elite (1)

Publication Date

2025 (60)
2022 (49)
2023 (48)
2024 (40)
2013 (39)
2012 (39)
2021 (36)
2015 (35)
2011 (34)
2014 (31)
2026 (26)
2016 (25)
2020 (22)
2010 (22)
2019 (20)
2017 (11)
2018 (11)
2009 (6)
2008 (4)
2006 (3)
2004 (3)
2007 (2)
2005 (2)
2027 (1)
2002 (1)
2001 (1)

UNIPROT ID/AC

P31327 (38)
B4E3A4 (35)
P60709 (35)
P63261 (35)
P25705 (34)
A5A3E0 (33)
P06576 (33)
Q9BYX7 (31)
P04264 (30)
P68032 (30)
P68133 (30)
I3L4N8 (29)
P00367 (29)
P07477 (29)
P62736 (29)
P63267 (29)
P69891 (29)
P69892 (29)
P35908 (28)
P68363 (28)
Q13707 (28)
O24646 (1)
P43254 (1)
Q8LGH4 (1)
Q9FFA7 (1)
Q9FN03 (1)
Q9LIE5 (1)
Q9LTJ6 (1)
Q9M086 (1)
Q9SYX2 (1)

ENSEMBL ID

ENSG00000170477 (5)
ENSG00000229353 (1)

CHEBI ID

CHEBI:30769 (16)
CHEBI:17154 (15)
CHEBI:17368 (15)
CHEBI:16704 (14)
CHEBI:16708 (14)
CHEBI:16919 (14)
CHEBI:17568 (14)
CHEBI:15891 (13)
CHEBI:16750 (13)
CHEBI:17596 (13)
CHEBI:17509 (12)
CHEBI:17895 (12)
CHEBI:18012 (12)
CHEBI:27897 (12)
CHEBI:6650 (12)
CHEBI:7916 (12)
CHEBI:15354 (11)
CHEBI:15756 (11)
CHEBI:16737 (11)
CHEBI:17053 (11)
CHEBI:17191 (11)
CHEBI:24813 (11)
CHEBI:25017 (11)
CHEBI:28300 (11)
CHEBI:28790 (11)
CHEBI:48131 (11)
CHEBI:78320 (11)
CHEBI:15428 (10)
CHEBI:16015 (10)
CHEBI:16027 (10)

Metabolite Name

Inosine (14)
Taurine (13)
Uridine (13)
L-Tyrosine (12)
Hypoxanthine (11)
Uracil (11)
Adenine (10)
Creatine (10)
Cytidine (10)
Guanine (10)
Pantothenic acid (10)
Deoxyinosine (9)
Guanosine (9)
L-Tryptophan (9)
Niacinamide (9)
Xanthine (9)
Xanthosine (9)
Adenosine (8)
Creatinine (8)
Indolelactic acid (8)
L-Glutamine (8)
L-Histidine (8)
Ornithine (8)
Riboflavin (8)
Taurocholic acid (8)
Thymidine (8)
Tyrosine (8)
Allantoin (7)
Azelaic Acid (7)
Azelaic acid (7)

First Public Date

2026 (1)
2020 (1)

Modelling Approach

Constraint-based model (1)
Ordinary differential equation model (1)

Lab affiliation

Professor and Director Center of Proteomic Analysis BGI-Shenzhen (4)
College of Life Science, Northwest University (2)
Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas, 75390, TX, USA (2)
Department of Molecular Pharmacology and Therapeutics Columbia University Irving Medical Center (2)
Key Laboratory of Tropical Marine Bio-resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, China (2)
Molecular Cell and Developmental Biology, School of Life Sciences, University of Dundee (2)
Northwest University (2)
School of Life Science and Technology ShanghaiTech University 100 Haike Road, Shanghai, China (2)
State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, China (2)
State Key Laboratory of Proteomics, National Center for Protein Sciences Beijing, Beijing Proteome Research Center, Beijing Institute of Radiation Medicine, Beijing 102206, China (2)
University of Victoria (2)
VIB Center for Medical Biotechnology, VIB, Ghent, B9052, Belgium Department of Biomolecular Medicine, Ghent University, Ghent, B9052, Belgium (2)
1Department of Neurosurgery, Yale School of Medicine, New Haven, CT, USA. Department of Neurosurgery, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, USA Broad Institute of Harvard and MIT, Cambridge, Massachusetts, USA (1)
Baylor College of Medicine, Houston, TX, 77054 (1)
Beijing Geriatric Healthcare and Disease Prevention Center, Xuanwu Hospital, Capital Medical University, Beijing, China. (1)
Beijing University of Agriculture (1)
Biochemistry (1)
Biosciences Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, United Kingdom (1)
CAS Key Laboratory of Tropical Marine Bio-Resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, China (1)
CAS Key Laboratory of Tropical Marine Bio-resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, China (1)
CAS Key Laboratory of Tropical Marine Bio-resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences,Guangzhou, China (1)
California State University Long Beach (1)
Center for Alzheimer's and Related Dementias (CARD), NIA and NINDS, NIH, Bethesda, Maryland, USA. (1)
Center for Alzheimer's and Related Dementias (CARD), National Institute on Aging and National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD, USA. (1)
Center for Alzheimer’s Disease and Related Dementias (CARD) National Institute on Aging (NIA) National Institutes of Health (NIH) (1)
Center for Alzheimer’s and Related Dementias, National Institutes of Health, Bethesda, MD, USA (1)
Center of Deep-sea Research, Institute of Oceanology Chinese Academy of Sciences (1)
Centre de Recherche en Cancérologie de Marseille, CRCM Inserm UMR1068, CNRS UMR7258, Aix Marseille Université U105, Institut Paoli Calmettes 27 Boulevard Leï Roure CS30059 13273 Marseille Cedex 09 France (1)
Changchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, State Key Laboratory of Pathogen and Biosecurity, Key Laboratory of Jilin Province for Zoonosis Prevention and Control, Changchun, China. (1)
Charles Perkins Centre, School of Medical Sciences, The University of Sydney, Sydney, NSW, Australia. (1)

IsPrivate

False (2)

Modification

-17.026549 (1)
0.984016 (1)
10.008269 (1)
15.994915 (1)
2x(15)N labeled L-lysine (1)
42.010565 (1)
45.029395 (1)
4x(15)N labeled L-arginine (1)
57.021464 (1)
6.020129 (1)

Study type

Transcription profiling by array (157)
RNA-seq of coding RNA (29)
DNA-seq (20)
Comparative genomic hybridization by array (13)
ChIP-seq (12)
RNA-seq of coding RNA from single cells (10)
Methylation profiling by array (8)
ChIP-chip by tiling array (6)
Other (4)
RNA-seq of non coding RNA (4)
Methylation profiling by high throughput sequencing (3)
Transcription profiling by SAGE (1)
Unknown experiment type (1)
ChIP-chip by array (1)
Transcription profiling by RT-PCR (1)
Bisulfite-seq (1)
Genotyping by high throughput sequencing (1)

Release Date

2025 (721)
2022 (703)
2023 (649)
2024 (580)
2021 (458)
2020 (355)
2019 (254)
2018 (249)
2017 (219)
2016 (177)
2015 (166)
2014 (132)
2026 (105)
2013 (100)
2012 (77)
2011 (74)
2010 (43)
2009 (19)
2008 (16)
2007 (8)
2006 (5)
2005 (5)
2004 (1)
2002 (1)
1999 (1)

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Structural polymorphism in the promoter of pfmrp2 confers tolerance to mefloquine and chloroquine in Plasmodium falciparum [expression]

Drug resistance in Plasmodium falciparum remains a challenge for the malaria eradication programs around the world. With the emergence of artemisinin resistance, the efficacy of the partner drugs in the artemisinin combination therapies (ACT) that include quinoline based drugs is becoming critical. ...

ORGANISM(S): Plasmodium falciparum

2013-02-07 | E-GEOD-44127 | biostudies-arrayexpress

Structural polymorphism in the promoter of pfmrp2 confers tolerance to mefloquine and chloroquine in Plasmodium falciparum [CGH]

ORGANISM(S): Plasmodium falciparum

2013-02-07 | E-GEOD-44128 | biostudies-arrayexpress

Expression data of soybean accessions under different phosphorus treatments

Phosphorus is one of the most important macronutrients that is required for plant growth and development. However, stress under low-P conditions has become a limiting factor that affects crop yields and qualities. Plants have developed strategies to cope with this, while few genes associated with lo...

ORGANISM(S): Glycine max

2016-03-08 | E-GEOD-78242 | biostudies-arrayexpress

Successive extraction of As(V), Cu(II) and P(V) ions from water using spent coffee powder as renewable bioadsorbents.

Not available

S-EPMC5318912 | biostudies-literature

Genome sequence and transcriptomic profiles of a marine bacterium, Pseudoalteromonas agarivorans Hao 2018.

Not available

S-EPMC6437646 | biostudies-literature

Pan-Genomic and Transcriptomic Analyses of Marine Pseudoalteromonas agarivorans Hao 2018 Revealed Its Genomic and Metabolic Features.

Not available

S-EPMC9027991 | biostudies-literature

Structural polymorphism in the promoter of pfmrp2 confers tolerance to mefloquine and chloroquine in Plasmodium falciparum.