Harms H H - OmicsDI

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Unknown (1050)
Transcriptomics (24)
Proteomics (15)
Metabolomics (8)
Genomics (5)

Organisms

Saccharomyces cerevisiae (9)
Mus musculus (9)
Homo sapiens (8)
Brucella melitensis bv. 1 str. 16M (2)
Saccharomyces pastorianus (2)
Macaca mulatta (1)
Saccharina latissima (1)
Drosophila melanogaster (1)
Arabidopsis thaliana (1)
Haberlea rhodopensis (1)
Escherichia coli (1)
Escherichia phage HildyBeyeler (1)
Myxobolus honghuensis (1)
Myxobolus wulii (1)
Myxococcus xanthus (1)
Pseudomonas sp. TDA1 (1)
Staphylococcus aureus (1)
Thelohanellus kitauei (1)

Organisms

Haberlea rhodopensis (1)
Oryza sativa (1)

Repository

biostudies-arrayexpress (25)
pride (13)
MetaboLights (7)
ENA (3)
MassIVE (2)
geo (1)
GNPS (1)

Tissue

Brain (3)
Cell culture (3)
B cell (1)
Blood (1)
Cell suspension culture (1)
Heart (1)
Nematocyst (1)
Striatum (1)

Disease

Huntington Disease (2)
Alzheimer's disease 1 (1)
Melanoma (1)
Myocardial ischemia (1)

Technology Type

Mass Spectrometry (13)
Shotgun proteomics (7)
Mass spectrometry (6)
Affinity purification coupled with mass spectrometry proteomics (2)
Bottom-up proteomics (2)
Data-dependent acquisition (2)
Mass spectrometry assay (1)
Data-independent acquisition (1)
Gel-based experiment (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
Illumina HiSeq 2500 (1)
MicrOTOF-Q II (1)
LTQ Orbitrap Velos (1)
Orbitrap Exploris 480 (1)
TimsTOF Pro 2 (1)
6490 Triple Quadrupole LC/MS (Agilent) (1)
6540 Q-TOF LC/MS (Agilent) (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - - - (1)
Liquid Chromatography MS - - - Liquid ChromatSTUDY PROTOCOLS (1)
Liquid Chromatography MS - alternating (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2013 (11)
2025 (5)
2018 (4)
2014 (4)
2015 (3)
2020 (3)
2026 (3)
2024 (3)
2019 (2)
2023 (2)
2022 (2)
2012 (1)
2009 (1)
2008 (1)
2007 (1)
2005 (1)
2017 (1)
2016 (1)

CHEBI ID

CHEBI:17351 (3)
CHEBI:137370 (2)
CHEBI:140933 (2)
CHEBI:15603 (2)
CHEBI:15729 (2)
CHEBI:15843 (2)
CHEBI:16015 (2)
CHEBI:16196 (2)
CHEBI:16359 (2)
CHEBI:16393 (2)
CHEBI:16414 (2)
CHEBI:16525 (2)
CHEBI:16566 (2)
CHEBI:16643 (2)
CHEBI:16755 (2)
CHEBI:16857 (2)
CHEBI:17115 (2)
CHEBI:17191 (2)
CHEBI:17203 (2)
CHEBI:17295 (2)
CHEBI:17687 (2)
CHEBI:17775 (2)
CHEBI:17895 (2)
CHEBI:18019 (2)
CHEBI:18050 (2)
CHEBI:18183 (2)
CHEBI:27432 (2)
CHEBI:27562 (2)
CHEBI:28125 (2)
CHEBI:28364 (2)

Metabolite Name

4-Hydroxyproline (2)
Glutamic acid (2)
Isoleucine (2)
Leucine (2)
Linoleic acid (2)
Methionine (2)
Ornithine (2)
Phenylalanine (2)
Proline (2)
Threonine (2)
Tyrosine (2)
Valine (2)
1,5-Anhydroglucitol (1)
1-Methylxanthine (1)
2-Octenoylcarnitine (1)
3-Guanidinopropanoate (1)
3-Hydroxybutanoic acid (1)
3-Indoleacrylic acid (1)
3-Methylglutaric acid (1)
3-Methylxanthine (1)
4,8,12,15,19-Docosapentaenoic acid (1)
4-Aminobenzoic acid (1)
4-Guanidinobutyric acid (1)
4-Pyridoxic acid (1)
5,6-Dihydrouracil (1)
5-Aminolevulinic acid (1)
5-Aminovaleric acid (1)
5-Hydroxy-L-tryptophan (1)
5-Hydroxylysine (1)
5-Methylcytidine (1)

First Public Date

2025 (1)
2022 (1)
2018 (1)

Modification

2x(15)N labeled L-lysine (1)
4x(15)N labeled L-arginine (1)

Study type

Transcription profiling by array (16)
RNA-seq of coding RNA (5)
ChIP-seq (2)
Unknown experiment type (1)
Other (1)

Release Date

2023 (137)
2025 (117)
2024 (106)
2022 (106)
2021 (102)
2020 (98)
2019 (84)
2018 (72)
2016 (46)
2017 (40)
2012 (26)
2015 (25)
2013 (23)
2026 (23)
2014 (21)
2008 (9)
2011 (9)
2009 (8)
2007 (6)
2010 (6)
2005 (4)
2006 (3)
2004 (2)
2001 (1)
2000 (1)

Lab affiliation

Max Planck Institute for Terrestrial Microbiology Karl-von-Frisch Str. 10 35043 Marburg Germany (2)
Biozentrum, University of Basel, Switzerland (1)
College of Fisheries, Huazhong Agricultural University (1)
Core Unit Proteomics, BIH at Charite and MDC, Robert Roessle Strasse 10, 13125 Berlin (1)
Department of Molecular Physiology, Leiden University & Oncode Institute, Leiden 2333 CC, Netherlands (1)
Evotec (1)
Helmholtz Centre for Environmental Research GmbH - UFZ Department of Molecular Systems Biology Permoserstraße 15, 04318 Leipzig, Germany (1)
Histon Modifications Group BioMedical Center Ludwig-Maximilians-Universität Großhadernerstr. 9 82152 Planegg-Martinsried Tel: +49 89 2180 75775 (1)
Interfaculty Institute of Genetics and Functional Genomics, Department of Functional Genomics, University Medicine Greifswald, Greifswald, Germany (1)
Member Cell and Molecular Biology Department St. Jude Children's Research Hospital Memphis, TN-38105 (1)
University Medical Center of the Johannes-Gutenberg University Mainz (1)
University of Michigan Dept Internal Medicine/Div Heme-Onc (1)

Tags

xref:PubMed:30541446 (1)

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Microarray analysis of human umbilical vein endothelial cells (HUVECs) chronically irradiated with low dose-rate of ionizing radiation for one, three and six weeks.

To obtain more insight in the molecular effects of chronic low dose irradiation on endothelial cells, HUVEC were irradiated with low-dose rate irradiation (137Cs gamma source; 0, 1.4 and 4.1 mGy/h) for several weeks. At different time points (1, 3 and 6 weeks) cells were harvested for RNA extraction...

ORGANISM(S): Homo sapiens

2018-02-28 | E-MTAB-6521 | biostudies-arrayexpress

Evolutionary trend toward kinetic stability in the folding trajectory of RNases H.

Not available

S-EPMC5135364 | biostudies-literature

Saccharomyces cerevisiae sorted and untreated

Gene expression of a vital, stained and sorted subpopulation of Saccharomyces cerevisiae with high affinity to glucose, harvested at a dilution rate of D=0.160 h-1, and of cells from the whole population without further treatment grown at the same dilution rate were analysed. The isolation of RNA wa...

ORGANISM(S): Saccharomyces cerevisiae

2007-10-01 | E-GEOD-8247 | biostudies-arrayexpress

Presentation on websites of possible benefits and harms from screening for breast cancer: cross sectional study.

Not available

S-EPMC314513 | biostudies-literature

Directed C(sp³)-H arylation of tryptophan: transformation of the directing group into an activated amide.

Not available

S-EPMC6844298 | biostudies-literature

Visible-Light-Activated Asymmetric β-C-H Functionalization of Acceptor-Substituted Ketones with 1,2-Dicarbonyl Compounds.

Not available

S-EPMC8103785 | biostudies-literature

Harms Reporting Is Inadequate in Systematic Reviews Regarding Hip Arthroscopy.