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TranscriptomicsA genome-wide analysis of open chromatin in human epididymis epithelial cells reveals novel candidate regulatory elements for male infertility [Transcriptome data]
The epithelium lining the epididymis has a pivotal role in ensuring a luminal environment that can support normal sperm maturation. Many of the individual genes that encode proteins involved in establishing the epididymal luminal fluid are well characterized. They include ion channels, ion exchanger...
ORGANISM(S): Homo sapiens 
2013-09-06 | E-GEOD-50605 | biostudies-arrayexpress
TranscriptomicsA genome-wide analysis of open chromatin in human epididymis epithelial cells reveals novel candidate regulatory elements for male infertility
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Homo sapiens 
2013-09-19 | E-GEOD-51003 | biostudies-arrayexpress
GenomicsFOXA2 regulates a network of genes involved in critical functions of intestinal epithelia
Background and Aims: The forkhead box A (FOXA) family of pioneer transcription factors is critical for the development of many endoderm-derived tissues including the lung and the liver. Here we investigate the role of FOXA2 in regulating intestinal epithelial cell function. Methods: ChIP-seq was use...
ORGANISM(S): Homo sapiens 
2015-08-06 | E-GEOD-66218 | biostudies-arrayexpress
TranscriptomicsDNase hypersensitivity mapping (DNase-chip) using Nimblegen ENCODE arrays in a variety of human cell types
DNase hypersensitivity using Nimblegen ENCODE arrays (DNase-chip) in primary human trachea epithelia (pHTE), normal human bronchial epithelia (NHBE), Caco2, HT29, human skin fibroblasts, primary human male epididymis. DNase hypersensitivity mapping is used to detect putative regulatory elements of t...
ORGANISM(S): Homo sapiens 
2009-10-31 | E-GEOD-18735 | biostudies-arrayexpress
GenomicsA genome-wide analysis of open chromatin in human epididymis epithelial cells reveals novel candidate regulatory elements for male infertility [DNase-Seq]
The epithelium lining the epididymis has a pivotal role in ensuring a luminal environment that can support normal sperm maturation. Many of the individual genes that encode proteins involved in establishing the epididymal luminal fluid are well characterized. They include ion channels, ion exchanger...
ORGANISM(S): Homo sapiens 
2013-09-19 | E-GEOD-51002 | biostudies-arrayexpress
GenomicsA genome-wide analysis of open chromatin in human tracheal epithelial cells reveals novel candidate regulatory elements for lung function (DNase-hypersensitivity)
Distal cell-type-specific regulatory elements may be located at very large distances from the genes that they control and are often hidden within intergenic regions or in introns of other genes. The development of methods that enable mapping of regions of open chromatin genome wide has greatly advan...
ORGANISM(S): Homo sapiens 
2013-11-08 | E-GEOD-52179 | biostudies-arrayexpress
TranscriptomicsOpen chromatin mapping identifies transcriptional networks regulating human epididymis epithelial function
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Homo sapiens 
2015-01-07 | E-GEOD-59783 | biostudies-arrayexpress
TranscriptomicsOpen chromatin mapping identifies transcriptional networks regulating human epididymis epithelial function [Rnase-Seq]
The epithelium lining the epididymis in the male reproductive tract maintains a luminal environment that promotes sperm cell maturation. This process is dependent on the coordinated expression of many genes that encode proteins with a role in epithelial transport. We previously generated genome-wide...
ORGANISM(S): Homo sapiens 
2015-01-07 | E-GEOD-59781 | biostudies-arrayexpress
TranscriptomicsEts homologous factor regulates pathways controlling response to injury in Calu-3 airway epithelial cells
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Homo sapiens 
2014-12-23 | E-GEOD-63400 | biostudies-arrayexpress
GenomicsOpen chromatin mapping identifies transcriptional networks regulating human epididymis epithelial function [Dnase-Seq]
The epithelium lining the epididymis in the male reproductive tract maintains a luminal environment that promotes sperm cell maturation. This process is dependent on the coordinated expression of many genes that encode proteins with a role in epithelial transport. We previously generated genome-wide...
ORGANISM(S): Homo sapiens 
2015-01-07 | E-GEOD-59782 | biostudies-arrayexpress
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