Harris E E - OmicsDI

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Transcriptomics (161)
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Organisms

Homo sapiens (122)
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Organisms

Citrobacter rodentium (1)

Repository

biostudies-arrayexpress (170)
pride (35)
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Mass Spectrometry (35)
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Instrument Platform

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Instrument (2)
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Nuclear Magnetic Resonance (NMR) - - - Bruker (1)
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Xevo QTof MS (Waters) (1)

Publication Date

2014 (28)
2012 (27)
2010 (24)
2015 (17)
2011 (17)
2013 (14)
2008 (11)
2023 (8)
2021 (8)
2020 (8)
2025 (8)
2024 (7)
2016 (6)
2007 (6)
2009 (5)
2019 (4)
2018 (4)
2017 (4)
2006 (4)
2005 (4)
2022 (4)
2026 (3)

CHEBI ID

CHEBI:15354 (2)
CHEBI:15428 (2)
CHEBI:15676 (2)
CHEBI:15724 (2)
CHEBI:15891 (2)
CHEBI:16199 (2)
CHEBI:16704 (2)
CHEBI:16737 (2)
CHEBI:16797 (2)
CHEBI:16919 (2)
CHEBI:17154 (2)
CHEBI:17268 (2)
CHEBI:17306 (2)
CHEBI:17368 (2)
CHEBI:17562 (2)
CHEBI:17596 (2)
CHEBI:17724 (2)
CHEBI:17750 (2)
CHEBI:17754 (2)
CHEBI:17992 (2)
CHEBI:18123 (2)
CHEBI:18132 (2)
CHEBI:18186 (2)
CHEBI:18211 (2)
CHEBI:24898 (2)
CHEBI:27570 (2)
CHEBI:30769 (2)
CHEBI:30794 (2)
CHEBI:37024 (2)
CHEBI:37684 (2)

Metabolite Name

3-phosphoglycerate (2)
Adenine (2)
Alanine (2)
Allantoin (2)
Cholesterol (2)
Citrate (2)
Creatinine (2)
Cysteine (2)
Fumarate (2)
Glutamate (2)
Glutamine (2)
Glycine (2)
Isoleucine (2)
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Leucine (2)
Lysine (2)
Malate (2)
Methionine (2)
Myo-Inositol (2)
Ornithine (2)
Pantothenate (2)
Phenylalanine (2)
Proline (2)
Pyruvate (2)
Sarcosine (2)
Serine (2)
Succinate (2)
Taurine (2)
Tryptophan (2)
Tyrosine (2)

First Public Date

2024 (1)
2013 (1)

Modelling Approach

Logical model (2)
Ordinary differential equation model (1)

Study status

Recruiting (1)

Lab affiliation

University of Victoria (10)
Department of Physiology, Development and Neuroscience, University of Cambridge, Downing Street, Cambridge CB2 3DY, UK. (3)
Boston University School of Medicine Center for Biomedical Mass Spectrometry (1)
Centre for Innate Immunity and Infectious Diseases, Hudson Institute of Medical Research and Department of Molecular and Translational Sciences, Monash University, Clayton, Victoria, Australia. (1)
Centre for Proteome Research, Institute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool L69 7ZB, UK (1)
Chemistry Department, King's College London (1)
Children's Medical Research Institute, Faculty of Medicine and Health, Westmead, NSW, Australia (1)
Department of Immunology & Microbiology, Scripps Research, USA (1)
Department of Immunology, Weizmann Institute of Science, Rehovot, Israel (1)
Head of Proteomics, Beatson Institute for Cancer Research (1)
IB3, Heriot Watt University, Edinburgh EH14 4AS, UK (1)
Jiangsu Academy of Agricultural Sciences (1)
Marten Lab Chemical, Biochemical, and Environmental Engineering University of Maryland Baltimore County Baltimore, MD 21250 (1)
Mass Spectrometry Research Center Departments of Biochemistry, Chemistry, Pharmacology, Medicine Vanderbilt University Nashville TN, USA (1)
Mayo Proteomics Core (1)
Member, St. Jude Faculty / Director, Division of Experimental Hematology / Wall Street Committee Endowed Chair St. Jude Children's Reserch Jospital Memphis, TN 38105 (1)
Professor of Human Molecular Metabolism, dr.med. (MD, Doctor of Medical Science), Chief Research Physician, Specialist in Endocrinology, Herlev-Gentofte University Hospital, Department of Clinical Medicine, and Novo Nordisk Foundation Center for Basic Metabolic Research, Faculty of Health and Medical Science, University of Copenhagen, Copenhagen, Denmark (1)
School of Medical Sciences, Faculty of Medicine and Health, The University of Sydney, NSW 2006, Australia (1)
Scientist E Regional Medical Research Centre, Indian Council of Medical Research Port Blair, INDIA (1)
Segal Cancer Proteomics Centre, Lady Davis Institute, Jewish General Hospital,McGill University, Montréal, Québec,Canada (1)
The Francis Crick Institute, 1 Midland Road, London, NW1 1AT, UK (1)
UK Dementia Research Institute at UCL, Cruciform Building, Gower Street, London, WC1E 6BT, UK. a.isaacs@ucl.ac.uk. (1)
Vanderbilt University Proteomics Core (1)
Weill Cornell Medical College, New York City (1)

IsPrivate

False (3)

Submitter Keywords

Immuno-oncology (1)

Classification

bacteria (1)

Study type

Transcription profiling by array (106)
RNA-seq of coding RNA (23)
ChIP-seq (7)
MicroRNA profiling by array (6)
Comparative genomic hybridization by array (5)
Methylation profiling by array (4)
Unknown experiment type (3)
Other (3)
RNA-seq of non coding RNA (3)
Transcription profiling by RT-PCR (2)
Methylation profiling by high throughput sequencing (2)
Differential (1)
Human - High-throughput sequencing (1)
Plant - High-throughput sequencing (1)
Animal - High-throughput sequencing (1)
DNA-seq (1)
Genotyping by high throughput sequencing (1)
Interventional (1)

Release Date

2022 (470)
2021 (459)
2023 (420)
2025 (397)
2024 (397)
2020 (316)
2019 (283)
2018 (267)
2015 (225)
2017 (224)
2016 (210)
2014 (197)
2013 (154)
2012 (143)
2011 (109)
2010 (109)
2009 (65)
2026 (59)
2008 (47)
2007 (19)
2006 (15)
2005 (15)
2004 (6)
2000 (5)
2003 (4)
2001 (4)
2002 (3)
1999 (1)
1998 (1)
1997 (1)

Location

Australia (1)

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Mitogenomes of mosquito species of Harris County in Texas.

Not available

S-EPMC12216632 | biostudies-literature

Characterisation of proteome of a novel Escherichia coli strain exhibiting mucoviscous phenotype.

Protein expression by E. coli 26561 during the late-exponential phase of cultures under anaerobic conditions was examined. E. coli 26561 is a multidrug resistant (MDR) and shows an unusual hyper-mucoviscous phenotype. Resistance includes ESBL (CTX-M-14) and proteome was determined with and without...

ORGANISM(S): Escherichia coli

2018-08-22 | PXD008339 | Pride

Deoxyguanosine forms a bis-adduct with E,E-muconaldehyde, an oxidative metabolite of benzene: implications for the carcinogenicity of benzene.

Not available

S-EPMC3408037 | biostudies-literature

Biosynthesis of Isonitrile Lipopeptides by Conserved Non-ribosomal Peptide Synthetase Gene Clusters in Actinobacteria

A putative lipopeptide biosynthetic gene cluster is conserved in many species of Actinobacteria, including Mycobacterium tuberculosis and Mycobacterium marinum, but the specific function of the encoding proteins has been elusive. Using both in vivo heterologous reconstitution and in vitro biochemica...

2017-07-18 | MTBLS454 | MetaboLights

Case growth analysis to inform local response to COVID-19 epidemic in a diverse U.S community.

Not available

S-EPMC9532394 | biostudies-literature

Vitamin E-doped total hip arthroplasty liners show similar head penetration to highly cross-linked polyethylene at five years: a multi-arm randomized controlled trial.

Not available

S-EPMC7517722 | biostudies-literature

Characterization of Three Novel Viruses from the Families Nyamiviridae, Orthomyxoviridae, and Peribunyaviridae, Isolated from Dead Birds Collected during West Nile Virus Surveillance in Harris County, Texas.

Not available

S-EPMC6832935 | biostudies-literature

Does e-commerce really matter on international trade of Asian countries: Evidence from panel data.

Not available