Harrison S S - OmicsDI

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Unknown (3936)
Proteomics (59)
Transcriptomics (54)
Genomics (11)
Metabolomics (9)
Models (5)
Genomic (1)

Organisms

Homo sapiens (45)
Mus musculus (28)
Severe acute respiratory syndrome coronavirus 2 (5)
Streptomyces coelicolor (4)
Drosophila melanogaster (4)
Escherichia coli (3)
Pseudomonas aeruginosa PAO1 (3)
Staphylococcus aureus (2)
Rattus norvegicus (2)
Saccharomyces cerevisiae (2)
Lyssavirus rabies (2)
Mammalia (1)
Clostridium perfringens (1)
Pasteurella multocida (1)
Equus caballus (1)
Campylobacter jejuni (1)
Populus tremula x Populus alba (1)
Ovis aries (1)
Caenorhabditis elegans (1)
Arabidopsis thaliana (1)
Aspergillus fumigatus var. fumigatus (1)
Bacteria (1)
Clostridioides difficile ATCC 43255 (1)
Lactobacillus johnsonii N6.2 (1)
Mycolicibacterium smegmatis (1)
Phaeodactylum tricornutum CCAP 1055/1 (1)
Pseudomonas [fluorescens] SBW25 (1)
Rabies virus CVS-11 (1)
Rangifer tarandus (1)
Struthio camelus (1)

Organisms

Anolis carolinensis (1)
Severe acute respiratory syndrome coronavirus 2 (1)

Repository

biostudies-arrayexpress (62)
pride (49)
MassIVE (9)
MetaboLights (8)
BioModels (5)
ENA (2)
dbGaP (1)
EGA (1)
GNPS (1)
PanoramaPublic (1)

Tissue

Cell culture (10)
Cell suspension culture (3)
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HEK-293T cell (1)
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Tear (1)

Disease

Breast cancer (2)
Cervix carcinoma (2)
Cancer (1)
Not applicable (1)
Normal (1)
Acute T cell leukemia (1)
Acute leukemia (1)
Frontotemporal dementia (1)
Lung squamous cell carcinoma (1)
Non-small cell lung carcinoma (1)
Plasmodium malariae malaria (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (49)
Shotgun proteomics (19)
Bottom-up proteomics (9)
Mass spectrometry (8)
Affinity purification coupled with mass spectrometry proteomics (6)
Data-dependent acquisition (5)
Gel-based experiment (5)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Mass spectrometry imaging (2)
SWATH MS (2)
Affinity proteomics (1)
All-ion fragmentation (1)
Data-independent acquisition (1)
Top-down proteomics (1)

Instrument Platform

Exactive (Thermo Scientific) (4)
Q Exactive (3)
Orbitrap Fusion (2)
Other (1)
G2505A DNA microarray scanner [Agilent] (1)
Illumina NovaSeq X (1)
NextSeq 2000 (1)
Illumina HiSeq 2500 (1)
Illumina NovaSeq 6000 (1)
LTQ Orbitrap Velos (1)
MALDI Synapt G2-S HDMS (1)
Orbitrap Ascend (1)
Orbitrap Eclipse (1)
Orbitrap Exploris 480 (1)
Q-Exactive (1)
TripleTOF 5600 (1)
Gas Chromatography MS - (1)
LTQ Classic (Thermo Scientific) (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2025 (15)
2024 (11)
2021 (11)
2013 (10)
2022 (10)
2010 (8)
2016 (7)
2015 (7)
2014 (7)
2011 (7)
2009 (7)
2019 (7)
2012 (5)
2017 (5)
2026 (5)
2020 (3)
2018 (3)
2023 (3)
2005 (1)
2008 (1)
2007 (1)
2006 (1)

UNIPROT ID/AC

P08192 (2)
P0A825 (2)
P0ABQ4 (2)
P0AC13 (2)
P26281 (2)
P31057 (2)
P01116 (1)
P04049 (1)
P04626 (1)
P21860 (1)
P27361 (1)
P29353 (1)
P31749 (1)
P60484 (1)
P62993 (1)
P63151 (1)
Q02297 (1)
Q02750 (1)
Q07889 (1)
Q07890 (1)

CHEBI ID

CHEBI:15428 (3)
CHEBI:12071 (2)
CHEBI:15422 (2)
CHEBI:16027 (2)
CHEBI:16474 (2)
CHEBI:16761 (2)
CHEBI:17822 (2)
CHEBI:17836 (2)
CHEBI:25523 (2)
CHEBI:26020 (2)
CHEBI:29987 (2)
CHEBI:38793 (2)
CHEBI:38797 (2)
CHEBI:57451 (2)
CHEBI:67016 (2)
CHEBI:16551 (2)
CHEBI:17268 (2)
CHEBI:17306 (2)
CHEBI:15552 (1)
CHEBI:15996 (1)
CHEBI:16618 (1)
CHEBI:17552 (1)
CHEBI:12936 (1)
CHEBI:1467 (1)
CHEBI:15366 (1)
CHEBI:15603 (1)
CHEBI:15756 (1)
CHEBI:15774 (1)
CHEBI:15824 (1)
CHEBI:15830 (1)

Metabolite Name

Maltose (2)
Myo-inositol (2)
(+)-sesamolin (1)
(2S)-2-isopropyl-3-oxosuccinate (1)
(S)-2-aceto-2-hydroxybutanoate (1)
1,2-benzoquinone (1)
1-O-(4-coumaroyl)-beta-D-glucose (1)
1-O-feruloyl-beta-D-glucose (1)
1-O-sinapoyl-beta-D-glucose (1)
1-aminocyclopropane-1-carboxylate (1)
2-dehydropantoate (1)
2-isopropylmaleate (1)
4-aminobutyraldehyde (1)
6,7-dimethyl-8-(1-D-ribityl)lumazine (1)
8-amino-7-oxononanoate (1)
ALA (1)
Acetate (1)
Alpha,alpha-trehalose (1)
Alpha-D-glucose (1)
Alpha-tocopherol (1)
Amylopectin (1)
Arachidic acid (1)
Benzoic acid (1)
Beta-D-galactose (1)
Beta-D-glucose (1)
Beta-L-arabinose 1-phosphate (1)
CE 18:0 (1)
Cer 34:0;2O (1)
Cer 34:1;2O|Cer 18:1;2O/16:0 (1)
Cer 36:1;2O (1)

First Public Date

2025 (1)
2021 (1)

Modelling Approach

Ordinary differential equation model (5)

Lab affiliation

College of Life Sciences, University of Dundee (2)
Department of Cell Biology and Physiology, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, United States. (2)
Department of Molecular Medicine The Scripps Research Institute (2)
Professor, Molecular Medicine Scientific Director UF Scripps Biomedical Research University of Florida (2)
University of the Pacific (2)
ARC Centre of Excellence in Synthetic Biology, School of Natural Sciences, Macquarie University, Sydney, Australia (1)
Astbury Centre for Structural Molecular Biology, Faculty of Biological Sciences, University of Leeds, Leeds, LS2 9JT, United Kingdom (1)
Bio21 Molecular Science and Biotechnology Institute,Department of Biochemistry and Pharmacology, University of Melbourne (1)
BioArCh, Department of Archaeology, University of York (1)
Clem Jones Centre of Aging Dementia Research, Queensland Brain Institute, University of Queensland (1)
DZNE Munich Neuroproteomics Feodor-Lynen Str. 17 81377 Munich Germany (1)
Department of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461, United States (1)
Department of Internal Medicine – Cardiology Division Investigator, Nora Eccles Harrison Cardiovascular Research& Training Institute, University of Utah, Salt Lake City, UT, USA (1)
Department of Microbiology and Cell Science, Genetics Institute, Institute of Food and Agricultural Sciences, University of Florida (1)
Department of Oncology, Laboratory for Disease mechanisms in cancer, KU Leuven Campus Gasthuisberg O&N1, Herestraat 49 - box 603 3000 Leuven (Belgium) (1)
Dept. Molecular Microbiology John Innes Centre Norwich Research Park Norwich, UK (1)
Dept. of Pharmacology Basic Science Building, Rm 306 Medical University of South Carolina United States of America (1)
Group Leader Dept Molecular Microbiology John Innes Centre Norwich, UK (1)
Helmholtz-Diabetes Center (1)
Infection Biology – LSHTM, Keppel street, WC1E 7HT (1)
John Innes Centre Molecular Microbiology Norwich, UK (1)
John Innes Centre Molecular Microbiology Nurwich, UK (1)
Lineberger Comprehensive Cancer Center, Dept of Cell Biology & Physiology, UNC Chapel Hill (1)
MRC Cancer Unit, University of Cambridge; Hutchison/MRCResearch Centre, Box 197, Cambridge Biomedical Campus, Cambridge, CB2 0XZ, UK (1)
Malaria Immunology Laboratory, The Francis Crick Institute, London, UK (1)
Manchester Cell Matrix Centre | Division of Cancer Sciences | School of Medical Sciences | Faculty of Biology, Medicine and Health The University of Manchester | Michael Smith Building | Oxford Road | Manchester M13 9PT (1)
Massachusetts Institute of Technology (1)
Maynooth University (1)
Medical Research Council Protein Phosphorylation and Ubiquitylation Unit School of Life Sciences, University of Dundee, Dundee, Scotland (1)
Monash University, Clayton, Australia (1)

IsPrivate

False (5)

Classification

viruses (1)

Study type

Transcription profiling by array (35)
ChIP-seq (7)
RNA-seq of coding RNA (7)
Comparative genomic hybridization by array (4)
Methylation profiling by array (3)
ChIP-chip by array (2)
ChIP-chip by tiling array (1)
Genotyping by array (1)
Hi-C (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2022 (454)
2021 (425)
2023 (411)
2025 (407)
2024 (373)
2020 (296)
2019 (243)
2018 (225)
2017 (190)
2015 (180)
2016 (156)
2014 (105)
2013 (100)
2012 (98)
2010 (73)
2011 (70)
2009 (52)
2026 (46)
2008 (22)
2007 (19)
2006 (16)
2005 (11)
2004 (6)
2003 (6)
2001 (5)
1998 (4)
2002 (3)
2000 (1)
1999 (1)

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The SARS coronavirus S glycoprotein receptor binding domain: fine mapping and functional characterization.

Not available

S-EPMC1236967 | biostudies-literature

Transcription profiling of S. coelicolor grown in liquid culture and heat shock stimulated

Global gene expression patterns of two biological replicate cultures of S.coelicolor MT1110 grown on YEME plus 10% sucrose up to early stationary phase ( the culture conditions were the same used for obtaining ChIP-chip data with anti HspR antibodies). RNA was harvested from heat-shocked cultures ...

ORGANISM(S): Streptomyces coelicolor

2009-02-07 | E-MAXD-49 | biostudies-arrayexpress

Origins and evolution of the HET-s prion-forming protein: searching for other amyloid-forming solenoids.

Not available

S-EPMC3214033 | biostudies-literature

The complete chloroplast genome of Fuchsia standishii J. Harrison, 1840 (Onagraceae) from Yunnan, China.

Not available

S-EPMC11459746 | biostudies-literature

Di-tert-butyl-chlorido(pyrrolidine-1-dithio-carboxyl-ato-κS,S')tin(IV).

Not available

S-EPMC2914963 | biostudies-literature

Investigating the sRNA and mRNA transcriptional response to antibiotics in methicillin-resistant Staphylococcus aureus using Illumina RNAseq

Coordinated protein-coding sequence transcriptional responses of Staphylococcus aureus to antimicrobial exposure are well described but little is known of the role of bacterial non-coding, small RNAs (sRNAs) in these responses. Here we used RNAseq to investigate the sRNA response of the epidemic mul...

ORGANISM(S): Staphylococcus aureus

2013-06-10 | E-GEOD-40864 | biostudies-arrayexpress

Efficacy and safety of oral semaglutide vs sitagliptin in a predominantly Chinese population with type 2 diabetes uncontrolled with metformin: PIONEER 12, a double-blind, Phase IIIa, randomised trial.

Not available

S-EPMC11410852 | biostudies-literature

Integration of genetic and physical maps of the Primula vulgaris S locus and localization by chromosome in situ hybridization.

Not available

S-EPMC6680154 | biostudies-literature

Establishment of regions of genomic activity during the Drosophila maternal-to-zygotic transition

A conspicuous feature of early animal development is the lack of transcription from the embryonic genome, and it typically takes several hours to several days (depending on the species) until widespread transcription of the embryonic genome begins. Although this transition is ubiquitous, relatively ...

ORGANISM(S): Drosophila melanogaster

2014-10-16 | E-GEOD-58935 | biostudies-arrayexpress

Combining SNAPs with antibiotics shows enhanced synergistic efficacy against S. aureus and P. aeruginosa biofilms.

Not available

S-EPMC10250483 | biostudies-literature

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