Hay E E - OmicsDI

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Transcriptomics (40)
Proteomics (23)
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biostudies-arrayexpress (53)
pride (17)
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Stem cell (3)
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Mass Spectrometry (17)
Shotgun proteomics (10)
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Bottom-up proteomics (4)
NMR spectroscopy (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Gel-based experiment (2)
Mass spectrometry assay (1)
Affinity purification coupled with mass spectrometry proteomics (1)
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Instrument Platform

Illumina Genome Analyzer II (3)
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Bruker (1)
Direct infusion MS - negative (1)
Exactive (Thermo Scientific) (1)
LTQ FT ULTRA (Thermo Scientific) (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - negative - reverse phase (1)
Nuclear Magnetic Resonance (NMR) (1)

Publication Date

2015 (11)
2010 (9)
2013 (8)
2016 (7)
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2017 (5)
2018 (4)
2024 (4)
2021 (4)
2019 (3)
2012 (3)
2011 (3)
2009 (3)
2004 (3)
2025 (3)
2026 (3)
2023 (3)
2014 (2)
2008 (2)

CHEBI ID

CHEBI:16704 (4)
CHEBI:16811 (4)
CHEBI:27266 (4)
CHEBI:28300 (4)
CHEBI:30769 (4)
CHEBI:15428 (3)
CHEBI:15741 (3)
CHEBI:15891 (3)
CHEBI:16335 (3)
CHEBI:16449 (3)
CHEBI:16742 (3)
CHEBI:16919 (3)
CHEBI:17126 (3)
CHEBI:17306 (3)
CHEBI:17750 (3)
CHEBI:18089 (3)
CHEBI:18186 (3)
CHEBI:18237 (3)
CHEBI:26986 (3)
CHEBI:27897 (3)
CHEBI:28044 (3)
CHEBI:140071 (2)
CHEBI:15354 (2)
CHEBI:15366 (2)
CHEBI:15611 (2)
CHEBI:15724 (2)
CHEBI:15929 (2)
CHEBI:16015 (2)
CHEBI:16027 (2)
CHEBI:16031 (2)

Metabolite Name

Citrate (3)
Glycine (3)
Valine (3)
2-aminoadipic acid (2)
2-ketobutyric acid (2)
3-hydroxybutyric acid (2)
3-thioureidopropionic acid (2)
Acetate (2)
Alanine (2)
Allantoin (2)
Benzoic acid (2)
Betaine (2)
Capric acid (2)
Creatine (2)
Creatinine (2)
D-galacturonic acid (2)
Dimethylamine (2)
Dodecanoic acid (2)
Formate (2)
Fumarate (2)
Glutamine (2)
Glyceric acid (2)
Heneicosanoic acid (2)
Heptadecanoic acid (2)
Hippurate (2)
Inosine (2)
Isoleucine (2)
L-Valine (2)
Lumichrome (2)
Mannose (2)

First Public Date

2025 (1)
2017 (1)
2016 (1)

Study type

Transcription profiling by array (26)
ChIP-seq (11)
RNA-seq of coding RNA (6)
ChIP-chip by tiling array (2)
Other (2)
Unknown experiment type (1)
Cell line - High-throughput sequencing (1)
ChIP-chip by array (1)
Proteomic profiling by array (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (130)
2021 (115)
2023 (107)
2020 (94)
2018 (91)
2025 (89)
2024 (87)
2019 (70)
2015 (67)
2017 (53)
2016 (49)
2010 (45)
2014 (40)
2013 (30)
2012 (20)
2009 (18)
2011 (16)
2026 (14)
2008 (6)
2004 (4)
2005 (4)
2007 (3)
2006 (2)
2002 (1)
2001 (1)
2000 (1)

Lab affiliation

Professor of Molecular Biology. Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee ,Dundee, DD1 5EH, Scotland, UK (2)
Agricultural and Plant Biochemistry and Proteomics Research Group, Dept. of Biochemistry and Molecular Biology, University of Cordoba, Agrifood Campus of International Excellence (ceiA3), 14071 Cordoba, Spain (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands Singapore Immunology Network (SIgN), Agency for Science, Technology and Research (A*STAR), 138648 Singapore, Singapore. Department of Pharmacy, National University of Singapore, 117543, Singapore, Singapore. (1)
Centre for Gene Regulation and Expression, Life Sciences Research Complex, University of Dundee, Dundee, UK (1)
Centre for Gene Regulation and Expression, Sir James Black Centre, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH. UK. (1)
Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN, USA (1)
Gene expression and Regulation, School of Life Sciences, University of Dundee, UK (1)
Institute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool, L69 3BX, United Kingdom (1)
Professor of Molecular Biology University of Dundee (1)
Professor of Molecular Biology, Centre for Gene Regulation and Expression, Life Sciences Research Complex, University of Dundee, Dundee, DD1 5EH (1)
Professor of Molecular Biology, University of Dundee (1)
Professor of Molecular Biology. University of Dundee. UK (1)
Proteomics program, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, 2200 Copenhagen, Denmark (1)
SULFAGING group, Leibniz-Institut für Analytische Wissenschaften – ISAS – e.V., DORTMUND, GERMANy (1)
Section for Evolutionary Genomics, GLOBE Institute, University of Copenhagen, Copenhagen, Denmark (1)
University of Colorado - Anschutz Medical Campus Department of Biochemistry and Molecular Genetics (1)

Tags

xref:EuropePMC:PMC10954177 (1)
xref:EuropePMC:PMC5541034 (1)
xref:EuropePMC:PMC4901035 (1)
xref:EuropePMC:PMC12874447 (1)

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Effect of forage conservation method and vitamin E on rumen function

An integrated multi-omics approach reveals the effects of supplementing grass or grass hay with vitamin E on the rumen microbiome and its function

PRJEB12948 | ENA

Colonization of grass vs hay by rumen microbes

A system biology approach reveals differences in the dynamics of grass vs hay colonization and utilization by rumen microbes with minor effects of vitamin E supplementation

PRJEB20255 | ENA

An Integrated Multi-Omics Approach Reveals the Effects of Supplementing Grass or Grass Hay with Vitamin E on the Rumen Microbiome and Its Function.

Not available

S-EPMC4901035 | biostudies-literature

A Systems Biology Approach Reveals Differences in the Dynamics of Colonization and Degradation of Grass vs. Hay by Rumen Microbes with Minor Effects of Vitamin E Supplementation.

Not available

S-EPMC5541034 | biostudies-literature

Effects of Hay, Baleage, and Soybean Hulls Waste Used as Supplemental Feeds on the Nutritional Profile of Grass-Finished Beef.

Not available

S-EPMC9741108 | biostudies-literature

Transcription profiling of human cell lines from Hay Wells Syndrome-Derived TAp63alphaQ540L mutant rveals impaired transcriptional and cell growth regulatory activity

p63 mutations have been associated with several human hereditary disorders characterized by ectodermal dysplasia such as EEC syndrome, ADULT syndrome and AEC syndrome . The location and functional effects of the mutations that underlie these syndromes reveal a striking genotype-phenotype correlati...

ORGANISM(S): Homo sapiens

2008-06-16 | E-GEOD-8646 | biostudies-arrayexpress

An epigenome-wide association study of total serum immunoglobulin E concentration.

Not available

S-EPMC4416961 | biostudies-literature

Pelleted-hay alfalfa feed increases sheep wether weight gain and rumen bacterial richness over loose-hay alfalfa feed.

Not available

S-EPMC6550389 | biostudies-literature

Changes to SUMO-modified proteome and total cellular proteome during EBV ractivation in AGS gastric carcinoma cells

To monitor changes to cellular and viral SUMO-modified proteins during EBV reactivation. SUMO1 and SUMO2 conjugates were studied using KGG mutant forms of SUMO and GG-K specific antibody enrichment of SUMO modified peptides. Time-points of 12h and 24h post-reactivation were monitored. Total cellular...

ORGANISM(S): Homo sapiens (Human)

2023-06-19 | PXD034631 | Pride

Sumo epstein-barr virus ebvhuman herpes virus 4 hhv4

Formulation of enzyme blends to maximize the hydrolysis of alkaline peroxide pretreated alfalfa hay and barley straw by rumen enzymes and commercial cellulases.

Not available

S-EPMC4022426 | biostudies-literature

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