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ProteomicspChem_benchmarking_dataset_QTRP_diff_ratios
Data sets are used for benchmarking, pChem, a modification-centric, blind-search tool to provide a streamlined pipeline for unbiased assessing of the performance of chemoproteomic probes. Data were produced from the IPM-based QTRP (quantitative thiol reactivity profiling) experiments where light and...
ORGANISM(S): Homo sapiens (Human) 
2022-12-16 | PXD027762 | Pride
Ipm diff_ratios pchem 
ProteomicspChem_benchmarking_dataset_QTRP_diff_instruments
Data sets are used for benchmarking, pChem, a modification-centric, blind-search tool to provide a streamlined pipeline for unbiased assessing of the performance of chemoproteomic probes. The IPM-based QTRP (quantitative thiol reactivity profiling) data sets were recorded on different LC-MS/MS instr...
ORGANISM(S): Homo sapiens (Human) 
2022-12-16 | PXD027758 | Pride
Instruments pchem 
ProteomicspChem_benchmarking_dataset_lysinome_profiling
Data sets are used for benchmarking, pChem, a modification-centric, blind-search tool to provide a streamlined pipeline for unbiased assessing of the performance of chemoproteomic probes. Data were produced from the IPM-based QTRP (quantitative thiol reactivity profiling) applications in various spe...
ORGANISM(S): Homo sapiens (Human) 
2022-12-16 | PXD027789 | Pride
Stp nhs lysinome pchem 
ProteomicspChem_benchmarking_dataset_initial_test_negative_data
we will acquire three types of data sets as negative controls from 1) probe-free samples (i.e., regular proteomics sample), 2) probe-labeled samples without isotope-coding, and 3) probe-free samples treated with isotope reagents (i.e., without probe labeling, peptides cannot be isotopically labeled)...
ORGANISM(S): Homo sapiens (Human) 
2022-12-16 | PXD032376 | Pride
Negative controls 
ProteomicspChem_benchmarking_dataset_initial_test_negative_data_20220318
we will acquire three types of data sets as negative controls from 1) probe-free samples (i.e., regular proteomics sample), 2) probe-labeled samples without isotope-coding, and 3) probe-free samples treated with isotope reagents (i.e., without probe labeling, peptides cannot be isotopically labeled)...
ORGANISM(S): Homo sapiens (Human) 
2022-12-16 | PXD032392 | Pride
Negative controls 
ProteomicspChem_benchmarking_dataset_QTRP_diff_species
Data sets are used for benchmarking, pChem, a modification-centric, blind-search tool to provide a streamlined pipeline for unbiased assessing of the performance of chemoproteomic probes. Data were produced from the IPM-based QTRP (quantitative thiol reactivity profiling) applications in various spe...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) Mus musculus (Mouse) Homo sapiens (Human) Escherichia coli Drosophila melanogaster (Fruit fly) Caenorhabditis elegans Rattus norvegicus (Rat) 
2022-12-16 | PXD030064 | Pride
Pchem diff_species qtrp 
UnknownBacillus licheniformis-based intensive fermentation of Tibetan tea improved its bioactive compounds and reinforced the intestinal barrier in mice.
Not available
S-EPMC11199413 | biostudies-literature
ProteomicsThe proteome of mantle exosomes of purple and white mussel in Hyriopsis cumingii
The proteome was based on the sequencing analysis of the mantle exosomes of purple and white Hyriopsis cumingii, and a total of 4861 proteins were obtained. After comparative analysis, 758 differential proteins were obtained (396 up-regulated proteins and 362 down-regulated proteins)
ORGANISM(S): Hyriopsis Cumingii 
2020-01-10 | PXD017064 |
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