He Ping P - OmicsDI

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Unknown (99)
Proteomics (72)
Transcriptomics (27)
Genomics (8)
Multiomics (6)
Metabolomics (6)
Other (1)

Organisms

Homo sapiens (42)
Chlamydomonas reinhardtii (28)
Pseudomonas canadensis (28)
Marchantia polymorpha subsp. ruderalis (28)
Methylocystis sp. (28)
Exiguobacterium sp. SH31 (28)
Porites pukoensis (28)
Bothrops insularis (28)
Bothrops jararaca (28)
Bothrops jararacussu (28)
Bothrops cotiara (28)
Dinosauria (28)
Streptomyces coelicolor (28)
Pseudomonas taiwanensis (28)
Burkholderia ubonensis MSMB22 (28)
Pseudomonas aeruginosa PA103 (28)
Artibeus jamaicensis (28)
Morchella importuna (28)
Mus musculus (13)
Arabidopsis thaliana (2)
Rattus norvegicus (2)
Dehalococcoides sp. ANAS2 (1)
Dehalococcoides (1)
environmental samples (1)
Bombyx mori (1)
mixed sample (1)
Pseudomonas aeruginosa PAO1 (1)
Sus scrofa (1)
Papilio xuthus (1)
Saccharomyces cerevisiae (1)

Repository

biostudies-arrayexpress (28)
pride (28)
iProX (16)
PeptideAtlas (16)
MassIVE (11)
EGA (7)
MetaboLights (6)
GPMDB (1)
jPOST (1)

Tissue

Plasma Non-glyco (11)
Cell culture (11)
Testis (6)
Others (3)
Male Reproductive System (2)
Blood serum (2)
Permanent cell line cell (2)
Colon (2)
Leg muscle (1)
Haploid cell (1)
Sperm (1)
Seed (1)
Diploid cell (1)
Cell suspension culture (1)
Blood plasma (1)
Stem cell (1)
Fibroblast (1)
Epithelial cell (1)
Kidney (1)
Liver (1)

Disease

Breast cancer (3)
Colon cancer (2)
Not Available (1)
Brain glioblastoma multiforme (1)
Disease free (1)

Technology Type

Mass Spectrometry (28)
Shotgun proteomics (18)
Mass spectrometry (5)
Data-dependent acquisition (4)
Affinity purification coupled with mass spectrometry proteomics (4)
Bottom-up proteomics (3)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
NMR spectroscopy (1)
Gel-based experiment (1)

Instrument Platform

LTQ Orbitrap Velos (15)
MS:1000031 (3)
Liquid Chromatography MS - negative - reverse phase (3)
Liquid Chromatography MS - positive - reverse phase (3)
LTQ Orbitrap (2)
Q Exactive HF (2)
LTQ Orbitrap Elite (2)
Illumina HiSeq 2000 (1)
Instrument (1)
Q Exactive HF-X (1)
Q Exactive (1)
Liquid Chromatography MS - negative (1)
Bruker (1)
Liquid Chromatography MS - negative - HILIC (1)
Liquid Chromatography MS - positive - HILIC (1)
Liquid Chromatography MS - positive - hilic (1)
QExactive (1)
UNKNOWN UNKNOWN (1)
Applied biosystems / mds sciex qstar (1)
Waters q-tof (1)
Applied biosystems / mds sciex q trap (1)
Applied biosystems / mds sciex 4700 proteomics analyzer (1)
Thermo lcq deca (1)
Thermo lcq deca xp (1)
Thermo ltq (1)

Publication Date

2015 (18)
2019 (10)
2014 (8)
2016 (7)
2013 (7)
2012 (7)
2021 (6)
2025 (6)
2023 (5)
2022 (5)
2018 (4)
2011 (3)
2020 (3)
2017 (2)
2010 (1)
2009 (1)
2024 (1)
2007 (1)

UNIPROT ID/AC

Q14974 (16)
P52209 (16)
P35222 (16)
P30613 (16)
Q9P1U1 (16)
Q9H0C2 (16)
P40227 (16)
O14556 (16)
O14818 (16)
B4DL86 (16)
Q15149-9 (16)
Q15149-8 (16)
Q15149-6 (16)
Q15149-4 (16)
Q15149-3 (16)
Q15149 (16)
Q14315-2 (16)
Q14315 (16)
Q12931 (16)
P55072 (16)
Q5HY54 (16)
Q58FF7 (16)
Q58FF6 (16)
P78371 (16)
P48643 (16)
Q9NSB2 (16)
Q9C075 (16)
Q9BYX7 (16)
Q9BTM1 (16)
Q99879 (16)

ENSEMBL ID

ENSG00000170477 (16)
ENSG00000147251 (8)
ENSG00000247315 (5)
ENSG00000214897 (2)
ENSG00000229353 (2)
ENSG00000204131 (1)

CHEBI ID

CHEBI:17895 (5)
CHEBI:15354 (4)
CHEBI:17368 (4)
CHEBI:17191 (3)
CHEBI:16828 (3)
CHEBI:17295 (3)
CHEBI:17053 (3)
CHEBI:17597 (3)
CHEBI:17203 (3)
CHEBI:15971 (3)
CHEBI:17780 (3)
CHEBI:17361 (3)
CHEBI:16027 (3)
CHEBI:49168 (2)
CHEBI:125610 (2)
CHEBI:125678 (2)
CHEBI:73830 (2)
CHEBI:68566 (2)
CHEBI:18176 (2)
CHEBI:143235 (2)
CHEBI:48981 (2)
CHEBI:27226 (2)
CHEBI:28997 (2)
CHEBI:73067 (2)
CHEBI:18086 (2)
CHEBI:35697 (2)
CHEBI:27823 (2)
CHEBI:17712 (2)
CHEBI:16610 (2)
CHEBI:16857 (2)

Metabolite Name

Hypoxanthine (3)
Choline (3)
L-histidine (2)
L-isoleucine (2)
L-tryptophan (2)
Indole-3-acetaldehyde (2)
L-tyrosine (2)
L-proline (2)
L-glutamic acid (2)
L-phenylalanine (2)
5-Hydroxy-L-tryptophan (2)
Dihydrobiopterin (2)
DL-Dopa (2)
L-lysine (2)
Phosphocholine (2)
L-Tyrosine (2)
Palmitoylcarnitine (2)
Indole (2)
4-Hydroxybenzaldehyde (2)
Spermidine (2)
L-methionine (2)
Cytosine (2)
Guanine (2)
Creatine (2)
Bicyclo-PGE2 (1)
(R)-3-hydroxybutyric acid (1)
Aldehydo-N-acetyl-D-glucosamine (1)
(R)-3-hydroxybutyrate (1)
Glycine betaine (1)
Pro Pro Gly (1)

Modification

Not available (1)

Study type

Transcription profiling by array (18)
Comparative genomic hybridization by array (4)
RNA-seq of coding RNA (4)
ChIP-seq (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (14)
2021 (14)
2020 (12)
2013 (11)
2022 (11)
2024 (10)
2015 (9)
2018 (8)
2012 (7)
2014 (6)
2023 (5)
2017 (5)
2019 (4)
2016 (3)
2011 (3)
2009 (2)
2026 (2)
2010 (1)

Lab affiliation

State Key Laboratory of Proteomics, National Center for Protein Sciences Beijing, Beijing Proteome Research Center, Beijing Institute of Radiation Medicine, Beijing 102206, China (3)
lanzhou university (2)
Ping Xu, Ph.D. Secretary General of CNHUPO Professor, Director Department of Genomics and Proteomics, State Key Laboratory of Proteomics, Beijing Proteome Research Center, National Center for Protein Sciences (Beijing) Beijing Institute of Lifeomics， 38 Life Science Park Road, Beijing 102206, P.R. China. Tel: 0086-10-61777113, Fax: 0086-10-61777060 (2)
Department of Biochemistry and Molecular Biology, Capital Medical University, Beijing, 100069, China (2)
The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China (2)
Peking Union Medical College (2)
State Key Laboratory of Proteomics, Beijing Proteome Research Center, National Engineering Research Center for Protein Drugs, National Center for Protein Sciences, Beijing Institute of Radiation Medicine, Beijing 102206, China (2)
State Key Laboratory of Proteomics; Beijing Proteome Research Center; National Center for Protein Sciences (Beijing) Beijing Institute of Lifeomics; China (1)
1.Department of Colorectal Surgery, The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China. 2.Guangdong Provincial Key Laboratory of Colorectal and Pelvic Floor Diseases, The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China. (1)
Sequence database group (1)
Beijing proteome research center, Beijing, China (1)
Department of Pre-Clinical Medicine, Lake Erie College of Osteopathic Medicine (1)
Secretary General of CNHUPO Professor, Director Department of Genomics and Proteomics, State Key Laboratory of Proteomics, Beijing Proteome Research Center, National Center for Protein Sciences Beijing Beijing Institute of Radiation Medicine， 38 Life Science Park Road, Beijing 102206, P.R. China. (1)
National Center For Protein Sciences · Beijing (1)
Capital Medical University (1)
Institute of Hydrobiology, Chinese Academy of Sciences (1)
University of Science and Technology of China (1)
BGI-shenzhen (1)
Secretary General of CNHUPO Professor, Director Department of Genomics and Proteomics, State Key Laboratory of Proteomics, Beijing Proteome Research Center, Beijing Institute of Radiation Medicine， 33 Life Science Park Road, Beijing 102206, P.R. China. Tel 0086-10-80727777 EXT 1314 (1)
Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, the Chinese Academy of Sciences (1)

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Selective anti-tumor activity of glutathione-responsive abasic site trapping agent in anaplastic thyroid carcinoma

Not available

S-EPMC11229194 | biostudies-literature

Efficacy and Safety of Xiao Ai Ping Injection Combined with Chemotherapy in Advanced Gastric Cancer: A Systematic Review and Meta-Analysis.

Not available

S-EPMC6545757 | biostudies-literature

Identifying potential therapeutic targets of Tang-Yi-Ping for the treatment of impaired glucose tolerance: a tandem mass tag-labeled quantitative proteomic analysis.

Not available

S-EPMC8576661 | biostudies-literature

Current evidence on the cytotoxic T-lymphocyte antigen 4 + 49G > A polymorphism and digestive system cancer risks: a meta-analysis involving 11,923 subjects.

Not available

S-EPMC4634354 | biostudies-literature

The flavonoid-sensing regulator AefR is involved in modulating quorum sensing through repressing the MexEF-OprN efflux pump in Pseudomonas fluorescens

Pseudomonas fluorescens is an important plant growth-promoting rhizobacteria (PGPR) for its biocontrol properties, which are mostly influenced by the quorum sensing (QS) system. Plants produce multiple metabolites like flavonoids to regulate physiology of PGPR. However, it remains under-explored how...

ORGANISM(S): Wickerhamia fluorescens

2025-02-15 | PXD052702 | Pride

Pseudomonas fluorescens

The flavonoid-sensing regulator AefR is involved in modulating quorum sensing through repressing the MexEF-OprN efflux pump in Pseudomonas fluorescens

ORGANISM(S): Pseudomonas fluorescens

2025-02-15 | PXD052703 | Pride

Pseudomonas fluorescens

Identification of the tumor metastasis-related tumor subgroups overexpressed NENF in triple-negative breast cancer by single-cell transcriptomics.

Not available

S-EPMC11409682 | biostudies-literature

circRNA_141539 can serve as an oncogenic factor in esophageal squamous cell carcinoma by sponging miR-4469 and activating CDK3 gene.

Not available

S-EPMC8109109 | biostudies-literature

Clinical and Mycobacterium tuberculosis strain characteristics of tuberculosis patients with diabetes mellitus in Changping District, Beijing, China.

Not available

S-EPMC11753084 | biostudies-literature

MIWI and piRNA-mediated cleavage of messenger RNAs in mouse testes

The piRNA machinery is known for its role in mediating epigenetic silencing of transposons. Recent studies suggest that this function also involves piRNA-guided cleavage of transposon-derived transcripts. As many piRNAs also appear to have the capacity to target diverse mRNAs, this raises the intrig...

ORGANISM(S): Mus musculus

2015-04-09 | E-GEOD-67683 | biostudies-arrayexpress

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213 Results

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Organisms

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Tissue

Disease

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Instrument Platform

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UNIPROT ID/AC

ENSEMBL ID

CHEBI ID

Metabolite Name

Modification

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Lab affiliation

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