He Yuan Y - OmicsDI

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Unknown (2741)
Proteomics (92)
Transcriptomics (29)
Genomics (10)
Metabolomics (9)
Other (2)
Multiomics (1)

Organisms

Aerococcus urinae NBRC 15544 = CCUG 36881 (46)
Andropogon gerardi (46)
Bacteria (46)
Bartonella quintana JK 31 (46)
Canis lupus familiaris (46)
Cnidaria (46)
Ectopseudomonas oleovorans CECT 5344 (46)
Ensifer adhaerens (46)
Globicatella sanguinis (46)
Halictus scabiosae (46)
Human immunodeficiency virus 1 (46)
Mesocricetus auratus (46)
Methylohalobius crimeensis 10Ki (46)
Miscanthus x giganteus (46)
Mus musculus (46)
Panicum virgatum (46)
Homo sapiens (41)
Mus musculus (22)
Rattus norvegicus (7)
Macaca mulatta (2)
Hevea brasiliensis (2)
Arabidopsis thaliana (1)
502593 (1)
Capsella rubella (1)
Cucumis sativus (1)
Drosophila melanogaster (1)
Lamprigera yunnana (1)
Pseudomonas aeruginosa PAO1 (1)
Saccharomyces cerevisiae (1)
Severe acute respiratory syndrome coronavirus 2 (1)

Repository

pride (46)
iProX (31)
biostudies-arrayexpress (30)
PeptideAtlas (13)
EGA (9)
MetaboLights (9)
MassIVE (3)
GPMDB (1)

Tissue

Cell culture (18)
Plasma Non-glyco (11)
Epithelial cell (4)
Male Reproductive System (2)
Brain (2)
Macrophage (2)
Permanent cell line cell (2)
Bladder (1)
Blood (1)
Blood cell (1)
Blood plasma (1)
Blood serum (1)
Cell suspension culture (1)
Cerebrospinal fluid (1)
Cervix squamous epithelium (1)
Exoskeleton (1)
Fibroblast (1)
HEK-293T cell (1)
Lung (1)
Malignant cell (1)
Neoplastic cell (1)
Pancreas (1)
Pancreatic adenocarcinoma cell line (1)
Pancreatic stellate cell (1)
Sperm (1)
Stem cell (1)
Stomach (1)
T cell (1)
Whole body (1)

Disease

Cervix carcinoma (2)
Disease free (2)
Influenza (2)
Pancreatic ductal adenocarcinoma (2)
Not Available (1)
Alzheimer's disease (1)
Liver cancer (1)
Malaria (1)
Pancreatic carcinoma (1)
Severe acute respiratory syndrome (1)
Stomach cancer (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (46)
Shotgun proteomics (18)
Mass spectrometry (9)
Bottom-up proteomics (8)
Data-dependent acquisition (8)
Data-independent acquisition (7)
Affinity purification coupled with mass spectrometry proteomics (6)
Affinity proteomics (2)
Gel-based experiment (2)
Olink affinity proteomics (2)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000 (1)
DiaPASEF (1)

Instrument Platform

LTQ Orbitrap Velos (14)
Liquid Chromatography MS - positive - reverse phase (3)
Liquid Chromatography MS - negative - reverse phase (3)
Liquid Chromatography MS - negative (2)
Liquid Chromatography MS - alternating - reverse phase (2)
Liquid Chromatography MS - positive - hilic (2)
Instrument (1)
Bruker maXis ESI Quadrupole TOF (1)
LTQ Orbitrap (1)
Gas Chromatography MS - (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - negative - hilic (1)

Publication Date

2013 (20)
2015 (17)
2024 (16)
2025 (15)
2026 (12)
2023 (10)
2020 (9)
2019 (8)
2021 (6)
2018 (6)
2012 (4)
2022 (4)
2016 (2)
2017 (1)
2010 (1)
2014 (1)

UNIPROT ID/AC

A0A024RC46 (13)
A5A3E0 (13)
A6NNZ2 (13)
B3KML9 (13)
B4DHB3 (13)
B4DL86 (13)
B4DRV9 (13)
B4DY08 (13)
B4E3A4 (13)
C9JM50 (13)
E7EX29 (13)
G8JLB6 (13)
H0YM50 (13)
H7BZ94 (13)
I3L4N8 (13)
J3KPS3 (13)
J3QRK5 (13)
M0QZ52 (13)
O00299 (13)
O14556 (13)
O14818 (13)
O60812 (13)
O75369 (13)
O75369-8 (13)
O75694 (13)
O76013 (13)
O76015 (13)
O95678 (13)
P00338 (13)
P00338-3 (13)

ENSEMBL ID

ENSG00000170477 (13)
ENSG00000147251 (5)
ENSG00000214897 (2)
ENSG00000229353 (2)
ENSG00000247315 (2)
ENSG00000204131 (1)

CHEBI ID

CHEBI:16040 (4)
CHEBI:16196 (4)
CHEBI:17597 (4)
CHEBI:15354 (4)
CHEBI:30769 (4)
CHEBI:20067 (4)
CHEBI:168026 (3)
CHEBI:68566 (3)
CHEBI:10043 (3)
CHEBI:60647 (3)
CHEBI:49168 (3)
CHEBI:28931 (3)
CHEBI:28813 (3)
CHEBI:21563 (3)
CHEBI:16708 (3)
CHEBI:15956 (3)
CHEBI:28875 (3)
CHEBI:17154 (3)
CHEBI:17780 (3)
CHEBI:116314 (3)
CHEBI:73067 (3)
CHEBI:18086 (3)
CHEBI:17620 (3)
CHEBI:73830 (3)
CHEBI:35581 (3)
CHEBI:16335 (3)
CHEBI:18176 (3)
CHEBI:17568 (3)
CHEBI:16962 (3)
CHEBI:7916 (3)

Metabolite Name

Kynurenic acid (4)
Cortisone (3)
Uric acid (3)
15-Octadecene-9,11,13-triynoic acid (2)
(R)-3,4-Dihydro-2-(4,8,12-trimethyl-3,7,11-tridecatrienyl)-2H-1-benzopyran-6-ol (2)
LysoPC(18:4(6Z,9Z,12Z,15Z)/0:0) (2)
Glutamylmethionine (2)
Methyl helianthenoate A glucoside (2)
Noradrenaline (2)
Genistein 4'-O-glucuronide (2)
Ethyl glucuronide (2)
Wogonin (2)
12-Oxo-2,3-dinor-10,15-phytodienoic acid (2)
Dihydrojasmonic acid (2)
Carnosic acid (2)
Pyrrole-2-carboxylic acid (2)
Cafestol (2)
Leucine (2)
Ketoleucine (2)
FAD (2)
Cantharidin (2)
Indole-3-acetaldehyde (2)
Uracil (2)
Pyroglutamic acid (2)
Geranic acid (2)
4-Pyridoxic acid (2)
Cannabidiolic acid (2)
Dihydrobiopterin (2)
Xanthurenic acid (2)
DL-Dopa (2)

Modification

N6 (1)
Not available (1)

Study type

Transcription profiling by array (23)
RNA-seq of coding RNA (2)
RNA-seq of non coding RNA (2)
Comparative genomic hybridization by array (1)
Methylation profiling by array (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2025 (483)
2023 (365)
2022 (360)
2024 (347)
2021 (287)
2020 (221)
2019 (137)
2018 (136)
2017 (84)
2026 (78)
2016 (71)
2015 (58)
2013 (47)
2014 (45)
2012 (22)
2011 (11)
2009 (5)
2010 (4)
2008 (2)
2007 (2)
2006 (2)
2005 (1)
2004 (1)
2003 (1)
2002 (1)

Lab affiliation

Institute of Life and Health Engineering, College of Life Science and Technology, Jinan University (4)
Sun Yat-sen University (2)
The First Affiliated Hospital of Fujian Medical University (2)
1 Department of Hepatobiliary & Pancreatic Surgery, Zhongnan Hospital of Wuhan University, Wuhan, 430071, PR China. 2 Clinical Medicine Research Center for Minimally Invasive Procedure of Hepatobiliary & Pancreatic Diseases of Hubei Province, Hubei, PR China. 3 Taikang Center for Life and Medical Sciences of Wuhan University (1)
1.Department of Pharmaceutics, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China 2.State Key Laboratory of Natural and Biomimetic Drugs, Beijing 100191, China 3.Beijing Key Laboratory of Molecular Pharmaceutics and New Drug Delivery Systems, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China (1)
1.Department of Pharmaceutics, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China 2.State Key Laboratory of Natural and Biomimetic Drugs, Beijing 100191, China Beijing Key Laboratory of Molecular Pharmaceutics and New Drug Delivery Systems, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China (1)
1Department of Hepatobiliary & Pancreatic Surgery, Zhongnan Hospital of Wuhan University, Wuhan, 430071, PR China. 2Clinical Medicine Research Center for Minimally Invasive Procedure of Hepatobiliary & Pancreatic Diseases of Hubei Province, Hubei, PR China. 3Taikang Center for Life and Medical Sciences of Wuhan University (1)
Anonymity for double-blind review (1)
Biological mass spectrometry and proteomics group, Department of Chemistry High-resolution mass spectrometry platform, Core research facilities Guangdong provincial key laboratory for cell microenvironment and disease research Southern University of Science and Technology (SUSTech) 403, 1st research building, 1088 Xueyuan Rd., Nanshan, Shenzhen (1)
Center for Cell Lineage and Development, CAS Key Laboratory of Regenerative Biology, Guangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, GIBH-HKU Guangdong-Hong Kong Stem Cell and Regenerative Medicine Research Centre, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou, China. (1)
Center for Cultivation of Subtropical Forest Resources (CCSFR), Zhejiang A & F University, Linan, Hangzhou, 311300, People's Republic of China. (1)
Centre for Membrane Interactions and Dynamics, Department of Biomedical Science, University of Sheffield, Sheffield (1)
China-Japan Friendship Hospital, Beijing, China (1)
China-Japan Friendship Hospital, China (1)
College of Biological and Pharmaceutical Sciences, China Three Gorges University (1)
College of Veterinary Medicine, Henan Agricultural University, Zhengzhou, China (1)
College of Veterinary Medicine, Huazhong Agricultural University, Wuhan 430070, China (1)
Department of Archaeology, Max Planck Institute for the Science of Human History, Jena, Germany. (1)
Department of Bioloigcal Science, National University of Singapore (1)
Department of Chemistry, Southern University of Science and Technology, Shenzhen, China (1)
Department of Chemistry, University of California Riverside, Riverside, CA 92521-0403. (1)
Department of Pathology, Guangzhou Women and Children's Medical Center, Guangzhou Medical University, Guangzhou, Guangdong, China Key Laboratory of Carcinogenesis and Cancer Invasion, Ministry of Education, Key Laboratory of Carcinogenesis, Ministry of Health, Cancer Research Institute, Xiangya Hospital, Central South University, Changsha, 410078, Hunan China (1)
Department of Pharmacodynamics, College of Pharmacy, University of Florida, Gainesville, FL, USA (1)
Department of Pharmacodynamics, University of Florida (1)
Department of Urology,Sun Yat-sen University Cancer Center,Guangzhou 510060,China (1)
Doctor at Tongji Hospital, Huazhong University of Science and Technology, Wuhan, China (1)
Epigenetics Program, Department of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania (1)
LanZhou University (1)
Lanzhou University (1)
Lanzhou University, Lanzhou, Gansu Province, China (1)

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Chevrette et al 2019 Insect-associated Streptomyces

Paper title: The antimicrobial potential of Streptomyces from insect microbiomes. Author list: Chevrette MG, Carlson CM, Ortega HE, Thomas C, Ananiev GE, Barns KJ, Book AJ, Cagnazzo J, Carlos C, Flanigan W, Grubbs KJ, Horn HA, Hoffmann FM, Klassen JL, Knack JJ, Lewin GR, McDonald BR, Muller L, Melo ...

ORGANISM(S): Pseudonocardia Kitasatospora Streptomyces Gordonia <actinomycete>

2019-12-18 | MSV000084723 | MassIVE

Physiological and transcriptome analysis of He-Ne laser pretreated wheat seedlings in response to drought stress.

Not available

S-EPMC5522386 | biostudies-literature

Therapeutic effects of traditional Chinese medicine Hua-Feng-Dan in a rat model of ischemic stroke involve renormalization of gut microbiota.

Not available

S-EPMC11808003 | biostudies-literature

New breast cancer prognostic factors identified by computer-aided image analysis of HE stained histopathology images.

Not available

S-EPMC4448264 | biostudies-literature

Combined metabolomics with transcriptomics reveals important serum biomarkers correlated with lung cancer proliferation through calcium signaling pathway

Lung cancer (LC) is still one of the most deadly cancers in the world, but there is a lack of non-invasive biomarkers to assist diagnosis and guide treatment. Herein, untargeted serum metabolomics of 57 LC patients and 59 HC people was performed based on gas chromatography-mass spectrography (GC-...

2025-04-29 | MTBLS1517 | MetaboLights

Depression and Osteoporosis: A Mendelian Randomization Study.

Not available

S-EPMC8531056 | biostudies-literature

Developmental validation of a high-resolution panel genotyping 639 Y-chromosome SNP and InDel markers and its evolutionary features in Chinese populations.

Not available

S-EPMC10568895 | biostudies-literature

Neuropeptide Y-mediated sex- and afferent-specific neurotransmissions contribute to sexual dimorphism of baroreflex afferent function.

Not available

S-EPMC5323221 | biostudies-literature

Comparative metabolomic analysis of exudates of microcystin-producing and microcystin-free Microcystis aeruginosa strains

Cyanobacterial harmful algal blooms (cHABs) dominated by Microcystis aeruginosa threaten the ecological integrity and beneficial uses of lakes globally. In addition to producing hepatotoxic microcystins (MC), M. aeruginosa exudates (MaE) contain various compounds with demonstrat...

2023-01-16 | MTBLS6603 | MetaboLights

Genetic interaction between pku300 and fbn2b controls endocardial cell proliferation and valve development in zebrafish.

Not available

S-EPMC3644139 | biostudies-literature

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2883 Results

Show results for

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

UNIPROT ID/AC

ENSEMBL ID

CHEBI ID

Metabolite Name

Modification

Study type

Release Date

Lab affiliation

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