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TranscriptomicsTranscription profiling of Arabidopsis wild type, FIE- and MIA- loss-of-function mutants
Plants with genotypes wild type, FIE loss-of-function and MIA loss-of-function were compared. Plants were grown in growth chambers at 70% humidity and daily cycles of 16 h light and 8 h darkness at 21 C. Plant material used for the experiments was pooled from 10 plants. Siliques without withering fl...
ORGANISM(S): Arabidopsis thaliana 
2007-01-18 | E-ATMX-10 | biostudies-arrayexpress
TranscriptomicsTranscription profiling by array of Arabidopsis wild type and topoIV mutant plants at the end of a dark period and after re-illumination
A topoisomeras IV mutant in a flu background was identified in a mutant screen for ectopic activation of a reporter for singlet oxygen release. Gene expression was profiled on AGRONOMCS1 microarrays for wild type and the topoIV mutant at the end of an 8h dark period and after 30min of re-illuminatio...
ORGANISM(S): Arabidopsis thaliana 
2011-01-01 | E-TABM-1076 | biostudies-arrayexpress
TranscriptomicsChIP-chip by array of Arabidopsis endosperm nuclei expressing a PHE1::PHE1-GFP reporter using H3K27me3 and IgG antibodies
ChIP was performed using chromatin from sorted endosperm nuclei expressing a PHE1::PHE1-GFP reporter. The following antibodies were used: anti H3K27me3 (Millipore, cat. 07-449) and IgG (Sigma I50006).
ORGANISM(S): Arabidopsis thaliana 
2010-12-14 | E-TABM-1008 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of wild type and transgenic msi1-tap1 plants at two time points at the age of 8 days
Wild type and transgenic msi1-tap1 plants were grown and gene expression was compared at two time points at the age of 8 days.
ORGANISM(S): Arabidopsis thaliana 
2006-12-10 | E-MEXP-513 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis etiolated seedlings, light-treated seedlings, leaves and flowers hybridized to ATH1 and AGRONOMICS1 arrays
RNA from etiolated seedlings, light-treated seedlings, leaves and flowers was hybridized to ATH1 and AGRONOMICS1 arrays.
ORGANISM(S): Arabidopsis thaliana 
2010-01-01 | E-MEXP-2472 | biostudies-arrayexpress
TranscriptomicsChromatin immunoprecipitation of Arabidopsis 4 day-old light-treated seedlings using anti H3, CT, pan, anti H3K9me2 and IgG antibodies
ChIP was performed using 100 mg of 4 day-old light-treated seedlings. The following antibodies were used: anti H3, CT, pan (Millipore 07-690), anti H3K9me2 (Diagenode pAb-060-050) and IgG (Sigma I50006).
ORGANISM(S): Arabidopsis thaliana 
2009-12-08 | E-MEXP-2480 | biostudies-arrayexpress
TranscriptomicsTranscription profiling by array of Arabidopsis wild type and rbr1-cs plants
Wild-type and rbr1-cs plants were grown on MS plates for 3 days. RNA was extracted from both genotypes and hybridized to ATH1 arrays.
ORGANISM(S): Arabidopsis thaliana 
2010-12-31 | E-TABM-1009 | biostudies-arrayexpress
TranscriptomicsTranscription profiling by array of Arabidopsis thaliana wild type and ppi2 mutant leaves.
RNA was labeled and hybridized to AGRONOMICS1 arrays.
ORGANISM(S): Arabidopsis thaliana 
2011-01-01 | E-TABM-951 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis pickle mutants
Wild type, pkl, pkr2 and pkl pkr2 plants were grown, and gene expression in roots was compared at the age of 5 days.
ORGANISM(S): Arabidopsis thaliana 
2009-08-19 | E-MEXP-2140 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis closed buds, open pollinated flowers and siliques
Plants were grown in growth chambers at 70% humidity and daily cycles of 16 h light and 8 h darkness at 21 C. Plant material used for the experiments was pooled from 12 plants. Stage I and stage II samples contained complete flower buds (stage I) or flowers (stage II). For stage III samples only sil...
ORGANISM(S): Arabidopsis thaliana 
2006-05-31 | E-MEXP-695 | biostudies-arrayexpress
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