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TranscriptomicsSingle-cell multiome analysis of human in vitro activated CD4 T cells
This study looks at the ATAC+RNA profiles of human CD4 T cells under bioreactor-like conditions as ACT. Cells were stimulated toward Th1,Th2,Treg and Th17 under anti-CD3/28 activation, and profiled on day 5.
ORGANISM(S): Homo sapiens 
2024-01-31 | E-MTAB-13711 | biostudies-arrayexpress
TranscriptomicsOverexpression of spliced XBP1 in in vitro Th2 cells, and comparison to 4u8c treatment
This experiment shows that the in vitro effect of 4u8c on Th2 cells can be rescued using XBP1s overexpression
ORGANISM(S): Mus musculus 
2018-10-06 | E-MTAB-7104 | biostudies-arrayexpress
TranscriptomicsImmune activated B cells are dominant in Prostate cancer - BCR sequencing
B cell receptor (BCR)-sequencing from 3 donors with prostate cancer. The sources are Peripheral blood B cells (P), tumour draining lymph nodes (S) and non-draining lymph nodes (N).
ORGANISM(S): Homo sapiens 
2023-01-01 | E-MTAB-11862 | biostudies-arrayexpress
TranscriptomicsSingle-cell multiome analysis of human tonsil B cells
B cells from tonsils of human donors were extracted for combined RNAseq+ATACseq from the same cell. One sample was prepared separately ("old") and is of lower quality, but still included. It primarily holds ATACseq information.
ORGANISM(S): Homo sapiens 
2023-04-13 | E-MTAB-12632 | biostudies-arrayexpress
TranscriptomicsSingle-cell RNA+ATAC sequencing of human CRL-1459 colonic fibroblasts
The 10x multiome (RNA+ATAC) kit was applied to CRL-1459 cells in culture at passage 10 and 15
ORGANISM(S): Homo sapiens 
2024-07-13 | E-MTAB-14220 | biostudies-arrayexpress
TranscriptomicsReconstructing the human first trimester fetal-maternal interface using single cell transcriptomics - 10x data
To explore the interactions between the range of maternal and fetal placental cell types present, we profiled the transcriptomes of more than 50,000 single cells from matched first trimester samples of maternal blood and decidua, as well as fetal cells from the placenta itself. RNA-seq was done usin...
ORGANISM(S): Homo sapiens 
2018-10-02 | E-MTAB-6701 | biostudies-arrayexpress
TranscriptomicsReconstructing the human first trimester fetal-maternal interface using single cell transcriptomics - Smartseq 2 data
To explore the interactions between the range of maternal and fetal placental cell types present, we profiled the transcriptomes of more than 50,000 single cells from matched first trimester samples of maternal blood and decidua, as well as fetal cells from the placenta itself. This part contains RN...
ORGANISM(S): Homo sapiens 
2019-08-21 | E-MTAB-6678 | biostudies-arrayexpress
TranscriptomicsThe cross-talk between prostate cancer cells and myeloid cells to prime cancer metastasis
RNA-seq of co-cultured and monocultured PC-3 and U937 cell lines. Cells were separated by FACS. The PC-3 uptake of U937 material was measured by staining the U937 with DiD and CFSE. Samples described as 4samp_* were a first sequencing trial of the same samples.
ORGANISM(S): Homo sapiens 
2022-11-30 | E-MTAB-11378 | biostudies-arrayexpress
TranscriptomicsReconstructing the human first trimester fetal-maternal interface using single cell transcriptomics - whole genome sequencing
To explore the interactions between the range of maternal and fetal placental cell types present, we profiled the transcriptomes of more than 50,000 single cells from matched first trimester samples of maternal blood and decidua, as well as fetal cells from the placenta itself. Demuxlet was used to ...
ORGANISM(S): Homo sapiens 
2018-10-17 | E-MTAB-7304 | biostudies-arrayexpress
UnknownAssociations of Fat Mass and Fat-Free Mass with Physical Fitness in 4-Year-Old Children: Results from the MINISTOP Trial.
Not available
S-EPMC4997386 | biostudies-literature
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