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TranscriptomicsDengue VN Microarray MD and DF study
DNA microarrays and specific RT-PCR assays were used to reveal transcriptional patterns in the blood of children presenting with dengue shock syndrome (DSS) and well-matched patients with uncomplicated dengue. The transcriptome of patients with acute uncomplicated dengue was characterized by a metab...
ORGANISM(S): Homo sapiens 
2008-12-18 | E-GEOD-13052 | biostudies-arrayexpress
GenomicsHomo sapiens
Gene expression response to 5 microbial stimuli in Detroit562 cells [RNA-seq]
PRJNA356689 | ENA
GenomicsHomo sapiens
Genome-wide RELA binding sites in response to 5 microbial stimuli in Detroit562 cells [ChIP-seq]
PRJNA356690 | ENA
GenomicsGenome wide association study of leprosy in Chinese population

Leprosy is a chronic infectious disease caused by Mycobacterium leprae (M. leprae). Due to M. leprae's narrow host range and an inability to be cultured in vitro, the biological investigation of this disease has been difficult. Host genetic factors have been ...

phs000217.v1.p1 | EGA
GenomicsSensitive mapping of chromatin-altering polymorphisms reveals molecular drivers of autoimmune disease
Although most disease associations detected by GWAS are nongenic, very few have been mapped to causal regulatory variants. Here, we present a method for detecting regulatory QTLs that does not require genotyping or whole-genome sequencing. The method combines deep, long-read ChIP-seq with a new stat...
ORGANISM(S): Homo sapiens 
2015-03-01 | E-GEOD-58852 | biostudies-arrayexpress
TranscriptomicsMycobacterium tuberculosis microarray to screen anti-tuberculosis compounds
Feature reduction of microarray data from mycobacteria treated with a variety of various clinical and investigational drugs We are using feature reduction to demonstrate that subsets of biomarker genes representative of the whole genome are sufficient for MOA classification and deconvolution in a me...
ORGANISM(S): Mycobacterium tuberculosis H37Rv 
2013-04-24 | E-GEOD-46212 | biostudies-arrayexpress
TranscriptomicsWhole blood gene expression in Vietnamese dengue patients
Dengue is a pan-tropic public health problem. In children, dengue shock syndrome (DSS) is the most common life-threatening complication. Predicting patients who may develop DSS may improve triage and treatment. To this end, we conducted a nested case-control comparison of the early host-transcriptio...
ORGANISM(S): Homo sapiens 
2010-10-29 | E-GEOD-25001 | biostudies-arrayexpress
UnknownAssembling a global database of child pneumonia studies to inform WHO pneumonia management algorithm: Methodology and applications.
Not available
S-EPMC9798037 | biostudies-literature
UnknownNatural resistance to Meningococcal Disease related to CFH loci: Meta-analysis of genome-wide association studies.
Not available
S-EPMC5090968 | biostudies-literature
UnknownFebrile illness in high-risk children: a prospective, international observational study.
Not available
S-EPMC9899189 | biostudies-literature
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