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TranscriptomicsHierarchical clustering of PDAC cell lines
Hierarchical clustering of pancreatic cancer cell lines based on differentially regulated genes between mesenchymal and epithelial PDAC cells derived from primary tumours and metastases from KrasG12D-driven mouse models of pancreatic cancer.
ORGANISM(S): Mus musculus 
2022-11-19 | E-MTAB-8173 | biostudies-arrayexpress
TranscriptomicsGenome-wide characterization of light-inducible responses reveals a hierarchical light-sensing cascade in N. crassa
To better understand the roles of WC-1, WC-2 and other putative photoreceptors in mediation of light signals and to identify new components in light sensing cascades, we used microarrays with genome-wide coverage to characterize light-inducible transcriptional changes in Neurospora crassa. After uns...
ORGANISM(S): Neurospora crassa 
2009-03-08 | E-GEOD-8932 | biostudies-arrayexpress
UnknownStatistical significance for hierarchical clustering.
Not available
S-EPMC5708128 | biostudies-literature
UnknownDivisive hierarchical maximum likelihood clustering.
Not available
S-EPMC5751574 | biostudies-literature
TranscriptomicsUnsupervised hierarchical clustering of iNPCs induced by 6 or 5 TFs
To clarify the gene expression profile of iNPC, microarray analysis was performed using iNPCs induced by 6 TFs (Pax6, Hmga2, Etv6, Gatad2b, Nfxl1, and Esx1) and 5 TFs (Esx1 was omitted from 6 TFs). Unsupervised hierarchical clustering indicated that iNPC is expressing a global transcriptional profil...
ORGANISM(S): Mus musculus 
2011-06-07 | GSE29724 | GEO
TranscriptomicsUnsupervised hierarchical clustering of iHPCs induced by 9 or 10 TFs
To clarify the gene expression profile of iHep, microarray analysis was performed using iHeps induced by 10 TFs (Foxg1, Lcor, Hnf3b, Hnf4a, Foxo6, Cdx2, Tcf1, Foxa3 ,Tcf2, Onecut1) and 9 TFs (Onecut1 was omitted from 10 TFs). Unsupervised hierarchical clustering indicated that iHep is expressing a g...
ORGANISM(S): Mus musculus 
2011-06-07 | GSE29730 | GEO
UnknownClustering on hierarchical heterogeneous data with prior pairwise relationships.
Not available
S-EPMC10807103 | biostudies-literature
UnknownExploring protein energy landscapes with hierarchical clustering.
Not available
S-EPMC1366497 | biostudies-literature
TranscriptomicsMicroarray analyses of microRNA expressions of long-term-cultured breast cancer stem cells in comparison with TV-circRGPD6-treated group and si-circRGPD6 group
RNA extraction and microarray analysis total RNA from long-term-cultured breast cancer stem cells of TV-circRGPD6-treated group and si-circRGPD6 group.The miRNA profiling was performed using Agilent miRNA array. Microarray experiments were conducted according to the manufacturer's instructions. To ...
ORGANISM(S): Homo sapiens 
2022-02-13 | E-MTAB-7556 | biostudies-arrayexpress
UnknownFast tree aggregation for consensus hierarchical clustering.
Not available
S-EPMC7085155 | biostudies-literature
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