High Anthony A - OmicsDI

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Unknown (381)
Transcriptomics (183)
Genomics (165)
Proteomics (81)
Metabolomics (14)
Genomic (6)
Other (2)
Models (1)

Organisms

Homo sapiens (124)
Caenorhabditis elegans (107)
Mus musculus (52)
Saccharomyces cerevisiae (11)
Rattus norvegicus (6)
Drosophila melanogaster (4)
Enterococcus faecalis OG1RF (3)
Aedes aegypti (3)
Bos taurus (3)
Botryllus schlosseri (3)
Acropora millepora (2)
Oncorhynchus nerka (2)
Schizosaccharomyces pombe (2)
Hordeum vulgare (2)
Plasmodium falciparum (2)
Saccharomyces mikatae (1)
Papio anubis (1)
Oenococcus oeni (1)
Myxococcus xanthus (1)
Pseudomonas synxantha (1)
Plasmodium yoelii (1)
Xenopus tropicalis (1)
Biomphalaria glabrata (1)
Plasmodium falciparum 3D7 (1)
Anopheles gambiae (1)
Salmo salar (1)
Triticum aestivum (1)
Escherichia coli (1)
Danio rerio (1)
Arabidopsis thaliana (1)

Organisms

Schizosaccharomyces pombe (2)
Homo sapiens (2)

Repository

biostudies-arrayexpress (301)
pride (47)
EGA (36)
MassIVE (22)
MetaboLights (14)
ENA (11)
PAXDB (7)
dbGaP (6)
PanoramaPublic (3)
GPMDB (2)
jPOST (2)
BioModels (1)

Tissue

Cell culture (14)
Blood (8)
Blood plasma (6)
Epithelial cell (4)
B cell (4)
Venom (2)
Cerebrospinal fluid (2)
Cell line cell (2)
Permanent cell line cell (2)
Colon (2)
Erythroleukemia cell line (1)
Brown adipocyte (1)
Malignant cell (1)
Breast (1)
HEK-293T cell (1)
Adipose tissue (1)
Extracellular vesicle (1)
Skin (1)
Brown adipose tissue (1)
Plant cell (1)
Bone marrow (1)
Leukocyte (1)
Blood serum (1)
Brain (1)
Dendritic cell (1)
Photosynthetic cell (1)
Fibroblast (1)
Lung (1)
Kidney (1)

Disease

Not Available (2)
Pancreatic ductal adenocarcinoma (2)
Pulmonary tuberculosis (2)
Pancreatic cancer (2)
Breast cancer (2)
Disease free (2)
HPV positive (1)
Colorectal cancer recurrence-free (1)
Coronary artery disease (1)
Cancer (1)
Ewing sarcoma of bone (1)
Myelodysplastic syndrome (1)
Fibrolamellar carcinoma (1)
Prostate adenocarcinoma (1)
Lung cancer (1)
Chronic myeloid leukemia (1)
Melanoma (1)
Influenza (1)
Malignant neoplasm of ovary (1)
COVID-19 (1)
Colon cancer (1)

Technology Type

Mass Spectrometry (47)
Shotgun proteomics (18)
Bottom-up proteomics (12)
Mass spectrometry (10)
Data-independent acquisition (8)
Affinity purification coupled with mass spectrometry proteomics (6)
Illumina HiSeq 2000 (5)
SWATH MS (5)
Mass spectrometry assay (3)
NMR spectroscopy (2)
Immunopeptidomics (2)
Data-dependent acquisition (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Illumina HiSeq 2500, Illumina HiSeq 4000, ILLUMINA, NextSeq 500 (1)
Illumina HiSeq 2000, ILLUMINA, Illumina HiSeq 2500 (1)
Illumina Genome Analyzer II (1)
SomaScan affinity proteomics (1)
Affinity proteomics (1)
DiaPASEF (1)

Instrument Platform

Q Exactive (7)
Illumina HiSeq 4000 (5)
Illumina HiSeq 2500 (4)
Illumina HiSeq 2000 (4)
LTQ (3)
Orbitrap Fusion Lumos (3)
NextSeq 500 (2)
Instrument (2)
LTQ Orbitrap Elite (2)
Orbitrap Fusion (2)
Q Exactive HF (2)
LTQ Orbitrap (2)
Q Exactive HF-X (2)
KAPA RNA HyperPrep Kit (1)
NEXTflex Small-RNA Seq kit v3 (Perkin Elmer) & NEXTflex Rapid XP DNA-seq kit v2 (Perkin Elmer) (1)
Direct-zol RNA microprep kit (Zymo Research), LabChip RNA pico sensitivity assay, Perkin Elmer & Nucleospin RNA kit (Macherey Nagel) (1)
PALM type 4 microscope (Zeiss) (1)
Illumina protocol (1)
10X Genomics Chromium (1)
GenePix Professional 4200A [Axon Instruments] (1)
DNA Microarray Scanner BA [Agilent Technologies] (1)
GenePix 4000B [Axon Instruments] (1)
Scanning hardware (1)
RNeasy Mini Kit (1)
N/a (1)
NextSeq 2000 (1)
MinION (1)
Ion Torrent S5 XL (1)
Illumina NovaSeq 6000 (1)
Agilent 7890A GC system, Agilent 5975C MS detector (1)

Publication Date

2011 (67)
2013 (55)
2012 (35)
2008 (25)
2014 (23)
2025 (22)
2010 (22)
2016 (20)
2021 (15)
2024 (15)
2015 (14)
2022 (13)
2007 (12)
2020 (11)
2026 (10)
2006 (9)
2023 (6)
2017 (5)
2019 (5)
2018 (5)
2009 (3)
2005 (3)
2002 (2)

UNIPROT ID/AC

MBD3_MOUSE (6)
10090.ENSMUSP00000113068 (6)
KXDL1_MOUSE (6)
GSTP2_MOUSE (6)
E9Q6E5_MOUSE (6)
NHP2_MOUSE (6)
RL18A_MOUSE (6)
CALM1_MOUSE (6)
UIF_MOUSE (6)
PAF1_MOUSE (6)
CATIN_MOUSE (6)
WDR33_MOUSE (6)
F6S4B9_MOUSE (6)
HMGA1_MOUSE (6)
Q9EQC8_MOUSE (6)
TRA2B_MOUSE (6)
PDIP3_MOUSE (6)
ZBED6_MOUSE (6)
SMCA2_MOUSE (6)
D3YWX2_MOUSE (6)
ARI1A_MOUSE (6)
SRS10_MOUSE (6)
CTCF_MOUSE (6)
10090.ENSMUSP00000136358 (6)
P5CR3_MOUSE (6)
10090.ENSMUSP00000048857 (6)
10090.ENSMUSP00000089346 (6)
SBP2_MOUSE (6)
10090.ENSMUSP00000089293 (6)
10090.ENSMUSP00000083973 (6)

CHEBI ID

CHEBI:16449 (7)
CHEBI:26271 (6)
CHEBI:27570 (6)
CHEBI:18186 (6)
CHEBI:26986 (6)
CHEBI:25017 (6)
CHEBI:28044 (6)
CHEBI:27266 (6)
CHEBI:7916 (6)
CHEBI:78320 (6)
CHEBI:27897 (6)
CHEBI:17368 (6)
CHEBI:70959 (5)
CHEBI:17822 (5)
CHEBI:25094 (5)
CHEBI:18237 (5)
CHEBI:22660 (5)
CHEBI:22653 (5)
CHEBI:16811 (5)
CHEBI:17234 (5)
CHEBI:28300 (5)
CHEBI:18257 (5)
CHEBI:16708 (5)
CHEBI:17752 (5)
CHEBI:24898 (5)
CHEBI:15428 (5)
CHEBI:15741 (5)
CHEBI:6650 (5)
CHEBI:28683 (5)
CHEBI:18211 (5)

Metabolite Name

N6-acetyllysine (4)
Malate (4)
Succinate (4)
Lactate (4)
Sulfate* (3)
Glycocholate (3)
2-hydroxypalmitate (3)
2-hydroxydecanoate (3)
Xanthurenate (3)
Tauroursodeoxycholate (3)
Pyridoxate (3)
Phenol sulfate (3)
P-cresol sulfate (3)
N-formylphenylalanine (3)
N-formylmethionine (3)
N-delta-acetylornithine (3)
N-acetylthreonine (3)
N-acetyltaurine (3)
N-acetylphenylalanine (3)
N-acetylleucine (3)
N-acetylisoleucine (3)
N-acetylalanine (3)
Kynurenate (3)
Indolelactate (3)
Hippurate (3)
Cholate (3)
4-methyl-2-oxopentanoate (3)
3-methylhistidine (3)
3-methyl-2-oxovalerate (3)
2'-deoxyuridine (3)

IsPrivate

False (1)

First Public Date

2026 (2)
2018 (2)
2014 (2)
2021 (1)
2020 (1)
2019 (1)
2013 (1)
2010 (1)

Modelling Approach

Ordinary differential equation model (1)

Modification

Not available (1)

Study type

ChIP-seq (118)
Transcription profiling by array (111)
RNA-seq of coding RNA (27)
Unknown experiment type (11)
ChIP-chip by tiling array (8)
Other (7)
RNA-seq of total RNA (5)
Comparative genomic hybridization by array (4)
Translation profiling (2)
RNA-seq of coding RNA from single cells (2)
RNA-seq of non coding RNA (2)
Animal - One-color microarray (1)
Animal - High-throughput sequencing (1)
RIP-seq (1)
Methylation profiling by array (1)

Release Date

2011 (71)
2013 (64)
2022 (54)
2025 (47)
2012 (47)
2023 (42)
2014 (38)
2016 (35)
2021 (34)
2020 (34)
2015 (31)
2024 (29)
2008 (28)
2018 (27)
2010 (25)
2019 (21)
2017 (16)
2007 (14)
2026 (7)
2009 (7)
2006 (5)
2005 (3)
2002 (2)
2001 (1)

Lab affiliation

Center for Proteomics & Metabolomics, St. Jude Children's Research Hospital, Memphis, TN 38105, USA (4)
Department of Biomolecular Sciences, Weizmann institute of Science, Israel (3)
Biomedicine Discovery Institute and Department of Biochemistry and Molecular Biology, Monash University, Clayton, VIC 3800, Australia (2)
Department of Biochemistry and Molecular Biology and the Biomedicine Discovery Institute; Monash University; Clayton 3800; Victoria; Australia (2)
Deputy Head (Research), Department of Biochemistry and Molecular Biology Head Immunoproteomics Laboratory Infection and Immunity Program Room 214, level 2, 15 Innovation Walk Monash Biomedicine Discovery Institute Monash University, Clayton Campus Clayton 3800 Victoria Australia (2)
Global Health Institute, EPFL, Lausanne, Switzerland (2)
Monash University (2)
University of Colorado Anschutz Medical Campus (2)
Howard Hughes Medical Institute Beth Israel Deaconess Medical Center Harvard Medical School (2)
Department of Biochemistry and Molecular Biology and the Infection and Immunity Program, Biomedicine Discovery Institute, Monash University, Clayton, VIC 3800, Australia (1)
Deputy Head (Research), Department of Biochemistry and Molecular Biology, Head Immunoproteomics Laboratory, Infection and Immunity Program, Monash Biomedicine Discovery Institute, Monash University, Victoria, Australia (1)
Department of Biochemistry, Monash University, Clayton,3168, Australia (1)
Deputy Head (Research), Department of Biochemistry and Molecular Biology Head Immunoproteomics Laboratory Infection and Immunity Program Room 214, level 2, 15 Innovation Walk Monash Biomedicine Discovery Institute Monash University, Clayton Campus Clayton 3800 Victoria Australia (1)
Infection and Immunity Program, Biomedicine Discovery Institute & Department of Biochemistry and Molecular Biology, Monash University, Clayton, Victoria 3800, Australia (1)
NCI Stadtman Investigator at the Center for Structural Biology in Frederick (1)
Department of Plant and Microbial Biology, University of California, Berkeley, USA (1)
Department of Medical Oncology, Dana-Farber Cancer Institute, 450 Brookline Avenue, Boston, MA 02215, USA; Harvard Medical School, Boston, MA 02215, USA. (1)
Deputy Head (Research), Department of Biochemistry and Molecular Biology Head Immunoproteomics Laboratory Infection and Immunity Program Monash Biomedicine Discovery Institute Monash University, Clayton Campus Clayton 3800 Victoria Australia (1)
Vice Dean, Faculty of Medical and Human Sciences Section Lead, Infrastructure and Technology, Manchester Academic Health Science Centre University of Manchester Wolfson Molecular Imaging Centre Manchester M20 3LJ (1)
Stoller Biomarker Discovery Center, University of Manchester, Manchester, England (1)
Department of Proteomics, The Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, DK-2200 Copenhagen, Denmark (1)
Cellular & Molecular Metabolism Laboratory, Drug Discovery Biology, Monash Institute of Pharmaceutical Sciences, Monash University. (1)
Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA (1)
Institute of Cancer Sciences 1st floor, Wolfson Molecuar Imaging Centre 27 Palatine Road Withington Manchester M20 3LJ (1)
Earth and Enviornmental Sciences; Rutgers University-Newark; Newark, NJ, USA (1)
Monash University, Clayton, Australia (1)
Department of Biochemistry and Molecular Biology, The University of Chicago, Chicago, IL 60637 Institute for Biophysical Dynamics, The University of Chicago, Chicago, IL 60637. (1)
Associate Professor, Immunobiology Associate Research Scientist, A2DRC The University of Arizona, USA (1)
NCI Stadtman Investigator for the Center for Structural Biology (1)
Center of Excellence in Systems Biology, Faculty of Medicine, Chulalongkorn University, Pathum Wan, Bangkok, Thailand 10330 (1)

Tags

xref:PubMed:19633696 (2)
xref:PubMed:29769286 (1)
xref:PubMed:30087143 (1)
xref:PubMed:26484112 (1)
xref:PubMed:23865462 (1)

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High-fat diet fuels prostate cancer progression by rewiring the metabolome and amplifying the MYC program

Systemic metabolic alterations associated with increased consumption of saturated fat and obesity are linked with increased risk of prostate cancer progression and mortality, but the molecular underpinnings of this association are poorly understood. Here, we demonstrate in a murine prostate cancer m...

2019-08-22 | MTBLS135 | MetaboLights

Anthony Nolan Submissions to IPD-IMGT/HLA Database from September 2017 to September 2018

PRJEB22644 | ENA

Anthony Nolan Submissions to IPD-IMGT/HLA Database from March 2019 to March 2020

PRJEB31939 | ENA

The Effect of Dietary BIoactives on Gut Microbiome DivErsity (DIME) - A pilot study (Untargeted metabolomics)

The gut microbiome refers to the complex community of microorganisms (bacteria, fungi, archaea and viruses) present within our gut. The composition and complexity of gut microbiota communities are crucial for maintaining human health. Humans depend on the gut microbiota to undertake essential met...

2025-10-10 | MTBLS8100 | MetaboLights

Metabolic phenotyping of urine from a dementia research cohort

To better understand the molecular mechanisms underpinning physiological variation in human populations, metabolic phenotyping approaches are increasingly being applied to studies involving hundreds and thousands of biofluid samples. Hyphenated ultra-performance liquid chromatography-mass spectromet...

2022-03-01 | MTBLS719 | MetaboLights

The Effect of Dietary Bioactives on Gut Microbiome DivErsity (DIME) - A pilot study (Targeted metabolomics)

2025-10-10 | MTBLS7290 | MetaboLights

The Case of a Missing HLA-B Gene.

Not available

S-EPMC11932453 | biostudies-literature

Design and computational fluid dynamics investigation of a personal, high flow inhalable sampler.

Not available

S-EPMC4780251 | biostudies-literature

Mine-site derived particulate matter exposure exacerbates neurological and pulmonary inflammatory outcomes in an autoimmune mouse model.

Not available

S-EPMC8052313 | biostudies-literature

Proteomics profiling of human CD34+ cells from MDS bone marrow and healthy control cells

Myelodysplastic syndromes (MDS) are a heterogeneous group of hematopoietic disorders characterized by ineffective blood cell production and a high risk of progression to acute myeloid leukemia (AML). CD34+ hematopoietic stem and progenitor cells (HSPCs) play a critical role in the pathophysiology of...

ORGANISM(S): Homo sapiens (Human)

2025-11-14 | PXD059857 | Pride

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833 Results

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