Hogg D D - OmicsDI

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Unknown (493)
Transcriptomics (18)
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Homo sapiens (26)
Mus musculus (9)
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Dugong dugon (3)
Myuchelys georgesi (1)
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biostudies-arrayexpress (17)
pride (16)
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geo (1)
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Disease

Renal cell carcinoma (2)
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Renal carcinoma (1)
Type 2 diabetes mellitus (1)

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Mass Spectrometry (16)
Shotgun proteomics (8)
Bottom-up proteomics (3)
Affinity purification coupled with mass spectrometry proteomics (2)
Top-down proteomics (2)
Mass spectrometry (1)
Data-independent acquisition (1)
SWATH MS (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2012 (9)
2022 (4)
2023 (4)
2013 (3)
2010 (3)
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2024 (2)
2011 (1)
2008 (1)
2007 (1)
2026 (1)
2021 (1)
2020 (1)
2019 (1)
2017 (1)

CHEBI ID

CHEBI:10110 (1)
CHEBI:1184 (1)
CHEBI:133028 (1)
CHEBI:133057 (1)
CHEBI:133657 (1)
CHEBI:133734 (1)
CHEBI:134073 (1)
CHEBI:134074 (1)
CHEBI:134254 (1)
CHEBI:137889 (1)
CHEBI:138529 (1)
CHEBI:1387 (1)
CHEBI:141 (1)
CHEBI:141419 (1)
CHEBI:141421 (1)
CHEBI:141422 (1)
CHEBI:141436 (1)
CHEBI:145970 (1)
CHEBI:149584 (1)
CHEBI:15544 (1)
CHEBI:15553 (1)
CHEBI:156055 (1)
CHEBI:15613 (1)
CHEBI:15655 (1)
CHEBI:15694 (1)
CHEBI:15756 (1)
CHEBI:15843 (1)
CHEBI:15887 (1)
CHEBI:15891 (1)
CHEBI:15905 (1)

Metabolite Name

()-Pelletierine (1)
(+)-Isomenthone (1)
(1S,4S)-Dihydrocarvone (1)
(1aalpha,2beta,3alpha,11calpha)-1a,2,3,11c-Tetrahydro-6,11-dimethylbenzo[6,7]phenanthro[3,4-b]oxirene-2,3-diol (1)
(3S)-3,6-Diaminohexanoate (1)
(3S,6E)-Nerolidol (1)
(3Z,6Z)-3,6-Nonadienal (1)
(E)-2-Penten-1-ol (1)
(E)-2-octenal (1)
(S)-2-Methylbutanal (1)
1,2-Dihydronaphthalene-1,2-diol (1)
1-Methyladenosine (1)
1-Methylguanosine (1)
1-Penten-3-ol (1)
11,12-DiHETrE (1)
11,14,17-Eicosatrienoic acid (1)
11Z-Eicosenoic acid (1)
12S-HHT (1)
13-L-Hydroperoxylinoleic acid (1)
15H-11,12-EETA (1)
16-Hydroxy hexadecanoic acid (1)
2,3-Diaminosalicylic acid (1)
2-Arachidonylglycerol (1)
2-Heptanone (1)
2-Hydroxyadenine (1)
2-Hydroxyadipic acid (1)
2-Maleylacetate (1)
2-Nonenal (1)
2-Octenal (1)
2-Phenyl-1,3-propanediol monocarbamate (1)

First Public Date

2023 (3)
2024 (1)
2014 (1)
2013 (1)

Study type

Transcription profiling by array (15)
Unknown experiment type (1)
RNA-seq of coding RNA (1)

Release Date

2023 (56)
2022 (55)
2021 (52)
2025 (32)
2016 (31)
2020 (30)
2024 (29)
2018 (27)
2015 (27)
2019 (25)
2014 (24)
2017 (23)
2013 (22)
2012 (17)
2011 (14)
2010 (11)
2007 (7)
2026 (7)
2008 (6)
2009 (6)
2005 (4)
2006 (3)
2004 (1)
2002 (1)

Lab affiliation

Amsterdam UMC, Vrije Universiteit Amsterdam, Medical Oncology, Cancer Center Amsterdam, OncoProteomics Laboratory, Amsterdam, Netherlands (3)
Charles Perkins Centre, University of Sydney (1)
Department of Chemistry, Imperial College London, UK (1)
Functional Proteomics, ICR (1)
Head, ACRF Centenary Cancer Research Centre, The Charles Perkins Centre, The University of Sydney, NSW, Australia (1)
Leonard P Ullmann Chair in Metabolic Systems Biology, The Charles Perkins Centre School of Life and Environmental Sciences and Sydney Medical School D17 - Charles Perkins Centre | The University of Sydney | NSW | 2006 (1)
Molecular Pharmacology Program, Sloan Kettering Institute, Memorial Sloan Kettering Cancer Center, New York, NY, USA. (1)
Prof Jochen H. M. Prehn Department of Physiology and Medical Physics Royal College of Surgeons in Ireland 123 St Stephen’s Green Dublin 2, Ireland (1)
Professor, Gilula Chair in Chemical Biology, The Department of Chemistry, Skaggs Institute for Chemical Biology, The Scripps Research Institute 10550 North Torrey Pines Rd, La Jolla, CA 92037 (1)
School of Life Sciences, University of Technology Sydney and Centenary Institute, University of Sydney, Sydney NSW, Australia (1)
School of Life Sciences, University of Technology Sydney, Faculty of Science, Sydney, New South Wales, Australia Centenary Institute, University of Sydney, Sydney, New South Wales, Australia (1)
Telethon Institute of Genetics and Medicine (TIGEM) Department of Translational Medicine, University of Naples "Federico II", Italy (1)
The Centenary Institute, University of Sydney, Camperdown NSW 2050, Australia Charles Perkins Centre, The University of Sydney, Camperdown NSW 2050, Australia. (1)
University of Edinburgh (1)

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The Folliculin-Fnip1 pathway deleted in human Birt-Hogg-Dube syndrome is required for B cell development.

Birt-Hogg-Dube (BHD) syndrome is an autosomal dominant disorder characterized by hamartomas of skin follicles, cystic lung disease, and renal neoplasia. Affected individuals carry heterozygous mutations in Folliculin (FLCN), a tumor suppressor gene that becomes biallelically inactivated in kidney t...

ORGANISM(S): Mus musculus

2012-06-16 | E-GEOD-38741 | biostudies-arrayexpress

Whole-genome gene expression profiles of non-tumorous human lung tissues: UBC set

We profiled genome-wide gene expression in non-tumorous human lung tissues. The overall goal of this project is to improve our molecular understanding of various lung diseases including lung cancer and chronic obstructive pulmonary disease (COPD). The samples from the University of British Columbia ...

ORGANISM(S): Homo sapiens

2012-06-10 | E-GEOD-23529 | biostudies-arrayexpress

Gene expression data from FLCN-restored UOK257-2 renal cancer cells

UOK257 cell line was derived from a BHD patient. It harbors a germline mutation in FLCN (c.1285dupC) and LOH. UOK257-2 cells were generated from UOK257 cells by introducing wildtype FLCN using retrovirus. FLCN inactivation induces TFE3 transcriptional activity by increasing its nuclear localization....

ORGANISM(S): Homo sapiens

2010-10-11 | E-GEOD-23614 | biostudies-arrayexpress

Gene expression profiling of BHDS-associated renal tumors

Renal tumors that arise in individuals with BHD Syndrome represent a molecularly distinct form of renal cancer. In addition, BHD syndrome is due to a mutation the folliculin gene (FLCN). While the folliculin gene is an important tumor suppressor gene, the molecular function of this gene is not well...

ORGANISM(S): Homo sapiens

2010-12-21 | E-GEOD-21816 | biostudies-arrayexpress

The Folliculin-Fnip1 pathway deleted in human Birt-Hogg-Dube syndrome is required for B cell development.

ORGANISM(S): Mus musculus

2012-06-16 | GSE38741 | GEO

Asthma and genes encoding components of the vitamin D pathway.

Not available

S-EPMC2779188 | biostudies-literature

D-dimer and exhaled CO2/O2 to detect segmental pulmonary embolism in moderate-risk patients.

Not available

S-EPMC2937237 | biostudies-literature

D-dimer threshold increase with pretest probability unlikely for pulmonary embolism to decrease unnecessary computerized tomographic pulmonary angiography.