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MetabolomicsPseudomonas sp. Strain 273 Incorporates Organofluorine into the Lipid Bilayer during Growth with Fluorinated Alkanes
Anthropogenic organofluorine compounds are recalcitrant, globally distributed, and a human health concern. Although rare, natural processes synthesize fluorinated compounds, and some bacteria have evolved mechanisms to metabolize organofluorine compounds. Pseudomonas sp. strain 273 grows with...
2022-06-06 | MTBLS3893 | MetaboLights
MetabolomicsIntestinal Bacillus sp. derived IBA activates PPARγ to promote PUFA synthesis in fish

Background: Marine fish are paradoxically rich in polyunsaturated fatty acids (PUFAs) despite their limited endogenous biosynthesis capacity, suggesting a critical role of exogenous acquisition or microbial contributions.

Results: Here, we characterized the gut microbiota of Seriola dumeri...

2026-02-09 | MTBLS13872 | MetaboLights
MetabolomicsAnalysis of the Mechanism of Pathogenicity Decline in Alternaria alternata f. sp. mali Mediated by the Mycovirus AaCV1
Apple leaf blotch disease caused by Alternaria alternata is a major fungal disease affecting apple production. To investigate the molecular mechanisms underlying virus-induced hypovirulence, metabolomic profiling was performed on A. alternata strains under different genetic and treatment conditions,...
2026-04-24 | MTBLS14366 | MetaboLights
TranscriptomicsMicroarray analysis of phosphate regulation in Synechococcus sp. WH8102
Primary productivity of open ocean environments, such as those inhabited by marine picocyanobacteria Synechococcus sp.WH8102, are often limited by low inorganic phosphate (P). To observe how this organism copes with P starvation, we constructed a full genome microarray and examined differences in ge...
ORGANISM(S): Synechococcus sp. WH 8102 
2010-05-18 | E-GEOD-13170 | biostudies-arrayexpress
ProteomicsSynechocystis sp. PCC 6803 trophic condition
Targeted proteome analysis of Synechocystis sp. PCC 6803 under photoautotrophic and mixotrophic conditions
ORGANISM(S): Synechocystis Sp. Pcc 6803 
2020-06-02 | PXD010010 | JPOST Repository
TranscriptomicsRNA-seq of Synechococcus sp. WH8102 zur knockout mutant
Identification of Zur-regulated genes in Synechococcus sp. WH8102
ORGANISM(S): Synechococcus sp. WH 8102 
2022-05-31 | E-MTAB-10194 | biostudies-arrayexpress
GenomicsHomo sp.
Homo sp. Raw sequence reads
PRJNA951087 | ENA
GenomicsHomo sp.
Homo sp. Genome sequencing and assembly
PRJNA973188 | ENA
TranscriptomicsGene expression patterns of sulfur starvation in Synechocystis sp. PCC 6803
The unicellular cyanobacterium Synechocystis sp. PCC 6803 is a model system for studying biochemistry, genetics and molecular biology of photobiological processes. Despite its importance in basic and applied research, the genome-wide picture of transcriptional regulation in this bacterium is limited...
ORGANISM(S): Synechocystis sp. PCC 6803 
2008-07-24 | E-GEOD-11970 | biostudies-arrayexpress
TranscriptomicsLHK2 SP
We used the commercially available amino-allyl RNA amplification Kit ver,2 (High Yield Type) (SIGMA-ALDRICH). Purified total RNA (3 ?g) was reverse-transcribed to generate double-stranded cDNA using an oligo dT T7 promoter primer and reverse transcriptase. Next, cRNA was synthesized using T7 RNA p...
ORGANISM(S): Homo sapiens 
2014-05-02 | E-MEXP-3913 | biostudies-arrayexpress
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