Hsiao A A - OmicsDI

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Unknown (2628)
Transcriptomics (80)
Proteomics (41)
Genomics (19)
Metabolomics (4)
Models (3)

Organisms

Aerococcus urinae NBRC 15544 = CCUG 36881 (39)
Andropogon gerardi (39)
Bacteria (39)
Bartonella quintana JK 31 (39)
Canis lupus familiaris (39)
Cnidaria (39)
Ectopseudomonas oleovorans CECT 5344 (39)
Ensifer adhaerens (39)
Halictus scabiosae (39)
Human immunodeficiency virus 1 (39)
Mesocricetus auratus (39)
Miscanthus x giganteus (39)
Morchella importuna (39)
Homo sapiens (37)
Mus musculus (28)
Arabidopsis thaliana (3)
Saccharomyces cerevisiae (2)
Rattus norvegicus (2)
Drosophila melanogaster (2)
Danio rerio (2)
Plasmodium falciparum (1)
Escherichia coli (1)
Phalaenopsis aphrodite subsp. formosana (1)
Bacteria (1)
Streptomyces rimosus (1)
Pan troglodytes (1)
Mus musculus domesticus (1)
Brachypodium distachyon (1)
Caenorhabditis elegans (1)
Sus scrofa (1)

Organisms

Homo sapiens (3)
Mus musculus (2)
gut metagenome (1)
root metagenome (1)
rhizosphere metagenome (1)

Repository

biostudies-arrayexpress (85)
pride (39)
ENA (14)
MetaboLights (4)
BioModels (3)
jPOST (1)
MassIVE (1)

Tissue

Cell culture (10)
Brain (3)
Permanent cell line cell (3)
Epithelial cell (2)
Leaf (2)
Skeletal muscle (2)
Aorta (1)
Artery (1)
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Blood serum (1)
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Pancreas (1)
Parathyroid gland (1)
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Prostate epithelium cell line (1)
Renal cortex (1)
Renal medulla (1)
Root (1)
Seed (1)
Venom (1)
Whole body (1)
Whole plant (1)

Disease

Breast cancer (2)
Normal (1)
Cervix carcinoma (1)
Lung adenocarcinoma (1)
Lung cancer (1)
Overweight (1)

Technology Type

Mass Spectrometry (39)
Shotgun proteomics (16)
Affinity purification coupled with mass spectrometry proteomics (9)
Data-dependent acquisition (8)
Bottom-up proteomics (6)
Gel-based experiment (4)
Mass spectrometry (3)
Data-independent acquisition (3)
NMR spectroscopy (1)
SRM/MRM (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - hilic (3)
Liquid Chromatography MS - positive - hilic (3)
Q Exactive (1)
Bruker (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - alternating - reverse phase (1)

Publication Date

2015 (17)
2012 (14)
2011 (13)
2016 (11)
2013 (10)
2010 (9)
2014 (7)
2025 (7)
2026 (7)
2021 (7)
2022 (6)
2024 (4)
2023 (4)
2017 (3)
2020 (3)
2005 (2)
2009 (2)
2008 (2)
2018 (2)
2007 (1)
2004 (1)

CHEBI ID

CHEBI:17154 (2)
CHEBI:6650 (2)
CHEBI:16335 (2)
CHEBI:18012 (2)
CHEBI:30915 (2)
CHEBI:30769 (2)
CHEBI:194378 (1)
CHEBI:91009 (1)
CHEBI:86334 (1)
CHEBI:86512 (1)
CHEBI:91026 (1)
CHEBI:91024 (1)
CHEBI:59522 (1)
CHEBI:1148|CHEBI:20067|CHEBI:30830 (1)
CHEBI:35366 (1)
CHEBI:47987 (1)
CHEBI:156335 (1)
CHEBI:156338 (1)
CHEBI:156331 (1)
CHEBI:156336 (1)
CHEBI:156339 (1)
CHEBI:156337 (1)
CHEBI:156340 (1)
CHEBI:24346 (1)
CHEBI:17793 (1)
CHEBI:28087 (1)
CHEBI:28681 (1)
CHEBI:27838 (1)
CHEBI:41139 (1)
CHEBI:27410 (1)

Metabolite Name

D-ribulose-15-bisphosphate (1)
Phosphoglyceric acid (1)
S-adenosyl-L-homocysteine (SAH) (1)
Nicotinic acid mononucleotide (NAMN) (1)
Nicotinamide riboside (NR) (1)
Nicotinic acid riboside (NAR) (1)
N-methyl-6-pyridone-3-carboxamide (Me-2-PY) (1)
1-methylnicotinamide (Me-Nam) (1)
9,10-dimethoxypterocarpan-3-O-beta-D-glucoside (1)
1,2-dihydroxy-3,4-dimethoxyisoflavan-7-O-beta-D-glucoside (1)
Calycosin-7-O-beta-D-glucoside (1)
Astragaloside I (1)
Astragaloside II (1)
Acetyl coenzyme A (1)
Ddh-GTP (1)
Ddh-GMP (1)
Ddh-Cytidine (1)
Ddh-CTP (1)
Ddh-CMP (1)
Alpha-ketoglutaric acid (1)
N-acetyl-D-glucosamine 6-phosphate (1)
D-glucosamine 6-phosphate (1)
Fructose 6-phosphate (1)
Phosphoenolpyruvate (1)
Glucose 6-phosphate (1)
NADP+ (1)
NAD+ (1)
Citric acid (1)
Malic acid (1)
GTP (1)

First Public Date

2021 (6)
2025 (2)
2022 (2)
2014 (2)
2024 (1)
2017 (1)

Modelling Approach

Ordinary differential equation model (2)
Deep learning (1)

Lab affiliation

Genomics Research Center, Academia Sinica, Taipei, Taiwan (3)
Department of Cell and Molecular Biology, College of Medicine, Chang Gung University, Taoyuan, Taiwan (2)
Molecular Physiology & Biophysics, Wright Lab, University of Iowa, USA (2)
1) Chemical Biology Program, Memorial Sloan Kettering Cancer Center, New York, New York, 10065, USA. 2) Pharmacology Program of the Weill Cornell Graduate School of Medical Sciences, Memorial Sloan Kettering Cancer Center, New York, New York 10065, USA. 3) Tri-Institutional PhD Program in Chemical Biology, Memorial Sloan Kettering Cancer Center, New York, New York 10065, USA. (1)
Assistant Professor, Clinical Cancer Prevention, University of Texas MD Anderson Cancer Center (1)
Biochemistry and Cell Signalling in Nitric Oxide Group Area of Biochemistry and Molecular Biology. Department of Experimental Biology. University of Jaén /University Institute for Research in Olive Oil and Olive Oils (Spain) (1)
Cambridge Centre for Proteomics University of Cambridge (1)
Cancer and Immunology Research Center, National Yang Ming Chiao Tung University (1)
Carnegie Institution for Science (1)
Centro Andaluz de Biologia del Desarrollo Pablo de Olavide University Carretera de Utrera, Km 1 41013 Seville, Spain (1)
Chemical Biology Program, Memorial Sloan Kettering Cancer Center, New York, New York 10065, USA (1)
Department of Applied Biology and Chemical Technology, Hong Kong Polytechnic University, Hung Hom, Hong Kong S.A.R., China (1)
Department of Clinical Cancer Prevention, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA. (1)
Department of Clinical Microbiology,Umeå University, Umeå, Sweden (1)
Department of Human Genetics, University of Chicago, Chicago, Illinois, USA; Department of Medicine, University of Chicago, Chicago, Illinois, USA (1)
Department of Microbiology Perelman School of Medicine University of Pennsylvania (1)
Department of Plant Pathology, University of Georgia, Athens, Georgia, USA (1)
Georg-August-University Goettingen, Albrecht-von-Haller-Institute of Plant Sciences, Department of Plant Molecular Biology and Physiology (1)
Institut de Pharmacologie Moléculaire et Cellulaire, Université Côte d'Azur, Centre National de la Recherche Scientifique, France (1)
Institute of Biomedical Science, Academia Sinica, Taiwan (1)
Institute of Biotechnology, Vietnam Academy of Science and Technology, 18 Hoang Quoc Viet, Cau Giay, Hanoi, 100000, Vietnam (1)
Institute of Chemistry, Academia Sinica, Taiwan (1)
Institute of Molecular Biology, Academia Sinica, Taiwan (1)
Ludwig-Maximilians-Universität München Protein Analysis Unit Molecular Biology Department Großhadernerstr. 9 82152 Planegg-Martinsried (1)
MCAM UMR 7245CNRS-MNHN 'Molécules de Communication et Adaptation des Microorganismes' (1)
Max-Planck Institute for Biophysical Chemistry, 37077 Goettingen, Germany University Clinical Center Goettingen, 37075 Goettingen, Germany (1)
Molecular Physiology & Biophysics Department , Wright Lab, University of Iowa, USA (1)
Molecular Physiology & Biophysics Department, University of Iowa, Iowa City, IA , USA (1)
Molecular Physiology & Biophysics Department, Wright Lab, University of Iowa, USA (1)
R602, Institute of Biological Chemistry, Academia Sinica (1)

IsPrivate

False (3)

Model Flag

Non Kinetic (2)

Submitter Keywords

Ersilia (1)
FAIR-AIML (1)
Machine Learning Model (1)

Study type

Transcription profiling by array (57)
RNA-seq of coding RNA (6)
ChIP-seq (5)
Comparative genomic hybridization by array (4)
RNA-seq of non coding RNA (4)
Other (3)
Unknown experiment type (2)
ChIP-chip by tiling array (2)
Animal - One-color microarray (1)
Methylation profiling by array (1)

Release Date

2022 (318)
2021 (293)
2025 (247)
2023 (240)
2024 (225)
2020 (224)
2019 (184)
2016 (170)
2017 (138)
2018 (132)
2015 (131)
2014 (86)
2013 (68)
2012 (64)
2011 (49)
2026 (32)
2010 (30)
2008 (21)
2009 (19)
2006 (11)
2007 (10)
2005 (7)
2004 (6)
2001 (3)
2002 (2)
1999 (2)
2000 (1)

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Chitin utilization by marine picocyanobacteria and the evolution of a planktonic lifestyle.

Marine picocyanobacteria Prochlorococcus and Synechococcus, the most abundant photosynthetic cells in the oceans, are generally thought to have a primarily single-celled and free-living lifestyle. However, while studying the ability of picocyanobacteria to supplement photosynthetic car...

2024-02-21 | MTBLS5229 | MetaboLights

The genome of Streptomyces rimosus shows a novel structure compared to other Streptomyces

This study compared the genome of Streptomyces rimosus rimosus against that of Streptomyces coelicolor. It also compared 4 strains with changes in oxytetracycline production and derived from G7, the type strain, against G7. Duplicate samples, each replicate may be found in the corresponding suppleme...

ORGANISM(S): Streptomyces rimosus

2010-05-26 | E-GEOD-10126 | biostudies-arrayexpress

NR-SAFE: a randomized, double-blind safety trial of high dose nicotinamide riboside in Parkinson's disease

Nicotinamide adenine dinucleotide (NAD) replenishment therapy using nicotinamide riboside (NR) shows promise for Parkinson’s disease (PD) and other neurodegenerative disorders. However, the optimal dose of NR remains unknown, and doses exceeding 2000 mg daily have not been tested in humans. To ev...

2025-04-09 | MTBLS8812 | MetaboLights

Switchable Charge Storage Mechanism via in Situ Activation of MXene Enables High Capacitance and Stability in Aqueous Electrolytes.

Not available

S-EPMC10919077 | biostudies-literature

Lower urinary tract symptoms-Benign prostatic hyperplasia may increase the risk of subsequent inguinal hernia in a Taiwanese population: A nationwide population-Based cohort study.

Not available

S-EPMC7279606 | biostudies-literature

Complete mitochondrial genome of Neuroctenus yunnanensis Hsiao, 1964 (Hemiptera: Aradidae: Mezirinae).

Not available

S-EPMC10732186 | biostudies-literature

Integrated metabolomics and transcriptomics study of traditional herb Astragalus membranaceus Bge. var. mongolicus (Bge.) Hsiao reveals global metabolic profile and novel phytochemical ingredients.

Not available

S-EPMC7677826 | biostudies-literature

A New Species in Notobitiella Hsiao in China Confirmed by Morphological and Molecular Data (Hemiptera: Heteroptera: Coreidae).

Not available

S-EPMC9148092 | biostudies-literature

Discovery Proteomics Identifies a Molecular Link between the Coatomer Protein Complex I and Androgen Receptor-dependent Transcription

Aberrant activation of androgen receptor (AR)-dependent transcriptional programs is a hallmark of human prostate cancers. At the molecular level, ligand-mediated AR activation is coordinated through spatial and temporal protein-protein interactions (PPIs) involving AR-interacting proteins, which we ...

ORGANISM(S): Homo sapiens (Human)

2016-07-20 | PXD002861 | Pride

Anticancer efficiency of cycloartane triterpenoid derivatives isolated from Cimicifuga yunnanensis Hsiao on triple-negative breast cancer cells.

Not available

S-EPMC6289211 | biostudies-literature

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2775 Results

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