Hsu E E - OmicsDI

Show results for

Unknown (2137)
Transcriptomics (122)
Proteomics (38)
Metabolomics (20)
Genomics (15)
Models (1)
Genomic (1)
Multiomics (1)

Organisms

Homo sapiens (90)
Mus musculus (43)
Arabidopsis thaliana (11)
Glycine max (9)
Saccharomyces cerevisiae (3)
Gallus gallus (3)
Trichoderma reesei (2)
Oryza sativa (2)
Caenorhabditis elegans (2)
Solanum pimpinellifolium (1)
Populus tremula x Populus alba (1)
Danio rerio (1)
Escherichia coli (1)
Rattus norvegicus (1)
Severe acute respiratory syndrome coronavirus 2 (1)

Organisms

Mus musculus (1)

Repository

biostudies-arrayexpress (133)
pride (25)
MetaboLights (19)
MassIVE (7)
PanoramaPublic (4)
jPOST (2)
ENA (2)
BioModels (1)
dbGaP (1)
EGA (1)
geo (1)
GNPS (1)

Tissue

Blood (3)
Brain (3)
Cell culture (3)
Blood cell (2)
Seedling (2)
Blood platelet (1)
Diploid cell (1)
Electrically active cell (1)
Epithelial cell (1)
Macrophage (1)
Olfactory bulb (1)
Olfactory cortex (1)
Primary cell (1)
Prostate cancer cell line (1)
Root (1)
T cell (1)
Whole plant (1)

Disease

Bacterial infectious disease (1)
Acute leukemia (1)
Brain glioblastoma multiforme (1)
COVID-19 (1)
Multiple myeloma (1)
Parkinson's disease (1)
Salmonella infectious disease (1)

Technology Type

Mass Spectrometry (25)
Mass spectrometry (17)
Shotgun proteomics (11)
Affinity purification coupled with mass spectrometry proteomics (6)
Bottom-up proteomics (5)
Mass spectrometry assay (2)
Data-dependent acquisition (2)
Data-independent acquisition (2)
Gel-based experiment (2)
Affinity proteomics (1)
SRM/MRM (1)
SWATH MS (1)

Instrument Platform

Illumina HiSeq 2000 (10)
Liquid Chromatography MS - positive - reverse phase (10)
Illumina NovaSeq 6000 (5)
Q Exactive Plus (4)
Liquid Chromatography MS - negative - reverse phase (4)
Orbitrap Fusion Lumos (2)
Q Exactive (2)
Liquid Chromatography MS - negative - hilic (2)
Chromium Next GEM Single Cell Multiome Reagent Bundle (1)
10X Genomics reagents (1)
454 GS 20 (1)
Illumina Genome Analyzer IIx (1)
Illumina NovaSeq X (1)
N/A (1)
LTQ FT (1)
MaXis (1)
LTQ Orbitrap Velos (1)
Q Exactive HF (1)
Direct infusion MS - negative (1)
Direct infusion MS - positive (1)
LMJ-SSP/ESI MS (Imaging MS) (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - positive - hilic (1)
MALDI MS (Imaging MS) (1)
LTQ-Orbitrap (1)

Publication Date

2013 (24)
2015 (21)
2014 (17)
2012 (16)
2023 (15)
2010 (15)
2016 (13)
2011 (12)
2021 (11)
2020 (10)
2024 (8)
2025 (6)
2008 (6)
2026 (4)
2022 (3)
2019 (2)
2009 (2)
2018 (2)
2017 (1)
2007 (1)
2006 (1)

UNIPROT ID/AC

O00187 (1)
P01024 (1)
P02741 (1)
P04003 (1)
P06681 (1)
P0C0L4 (1)
P0C0L5 (1)
Q15485 (1)

CHEBI ID

CHEBI:15891 (4)
CHEBI:16359 (4)
CHEBI:15318 (3)
CHEBI:15978 (3)
CHEBI:16196 (3)
CHEBI:16235 (3)
CHEBI:16335 (3)
CHEBI:16610 (3)
CHEBI:16708 (3)
CHEBI:16811 (3)
CHEBI:17368 (3)
CHEBI:18257 (3)
CHEBI:26078 (3)
CHEBI:26806 (3)
CHEBI:28865 (3)
CHEBI:28997 (3)
CHEBI:30769 (3)
CHEBI:35038 (3)
CHEBI:64032 (3)
CHEBI:64563 (3)
CHEBI:116314 (2)
CHEBI:137271 (2)
CHEBI:139138 (2)
CHEBI:143745 (2)
CHEBI:143757 (2)
CHEBI:15741 (2)
CHEBI:15746 (2)
CHEBI:15756 (2)
CHEBI:18132 (1)
CHEBI:506227 (1)

Metabolite Name

Succinate (4)
Cholic acid (3)
Tris(2-butoxyethyl) phosphate (3)
(2S,3S,4S,5R,6R)-6-[[(3S,4S,6aR,6bS,8aR,9R,12aS,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
2,6-Di-tert-butyl-4-hydroxymethylphenol (2)
6-phosphogluconate (2)
9(10)-EpOME (2)
AMP (2)
Alpha-linolenic acid|linolenic acid|(9Z,12Z,15Z)-octadeca-9,12,15-trienoic acid (2)
Caffeine (2)
Cystine (2)
Dibutyl phthalate (DBP) (2)
Elaidic acid (2)
Fumarate (2)
Guanine (2)
Lyso-PC(16:0) (2)
Methionine (2)
Monoolein (2)
NCGC00385123-01_C22H30O6_7b,9-Dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1,1a,1b,4,4a,5,7a,7b,8,9-decahydro-9aH-cyclopropa[3,4]benzo[1,2-e]azulen-9a-yl acetate (2)
Pyruvate (2)
Spermidine (2)
Taurocholic acid (2)
Urobilin (2)
Xanthine (2)
(1'S,2R,2'R,10'S,11'S,15'S)-17'-hydroxy-2',15'-dimethylspiro[oxolane-2,14'-tetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecane]-6',8'-diene-5,5'-dione (1)
(1-{1-[(4-hydroxy-3-methoxyphenyl)methyl]-7,8-dimethoxy-2,2-dimethyl-1,2,3,4-tetrahydro-2λ⁵-isoquinolin-2-yl}ethylidene)-λ⁴-oxidanyliumyl (1)
(10,14a-dihydroxy-2,2,4a,6a,6b,9,9,12a-octamethyl-docosahydropicen-13-yl)oxidanesulfonic acid (1)
(10S,14S)-10,14,20-trimethyl-16-methylidene-22-azahexacyclo[12.10.0.0²,¹¹.0⁵,¹⁰.0¹⁵,²³.0¹⁷,²²]tetracosan-5-ylium-7-olate (1)

First Public Date

2021 (1)
2014 (1)

Modelling Approach

Ordinary differential equation model (1)

Lab affiliation

National Taiwan Ocean University (2)
Basic Sciences, Fred Hutchinson Cancer Research Center, Seattle, WA USA (1)
Carnegie Institution for Science (1)
Case Western Reserve University (1)
Children's Medical Research Institute, Westmead, NSW (1)
Children's Medical Research Institute, Westmead, NSW, Australia (1)
Department of Biochemistry Biophysics and Structural Biology, Department of Biochemistry and Molecular Biophysics, Washington University in St. Louis, St. Louis, Missouri, United States (1)
Department of Biochemistry and Molecular Medicine and the Norris Comprehensive Cancer Center, Keck School of Medicine, University of Southern California, Los Angeles, CA, 90089, USA (1)
Department of Pharmacology & Toxicology (1)
Department of Radiology Canary Center at Stanford for Cancer Early Detection Stanford School of Medicine Stanford University (1)
Georg-August-University Goettingen, Albrecht-von-Haller-Institute of Plant Sciences, Department of Plant Molecular Biology and Physiology (1)
Human Immunological Diseases Section, Laboratory of Clinical Immunology and Microbiology, Division of Intramural Research, NIAID, NIH, Department of Health and Human Services, Unites States Government (1)
Institution of Plant and Microbial Biology, Academia Sinica, Taipei (1)
Keck MS & Proteomics Resource Yale University School of Medicine (1)
Massachusetts General Hospital, USA (1)
Max-Planck-Institut für Molekulare Pflanzenphysiologie (1)
Molecular and Cellular Biology Baylor College of Medicine Houston, Texas (1)
Professor Department of Laboratory Medicine and Pathology Mayo Clinic 200 First Street SW, Rochester, MN 55905 (1)
Proteomics and Cancer Cell Signaling, DKFZ Heidelberg (1)
School of Biosciences University of Sheffield United Kingdom (1)
Telomere Length Regulation Unit, Children's Medical Research Institute, Westmeand, Australia (1)
University of Florida (1)
University of Wisconsin - Madison (1)
aInstitute for Environmental Assessment and Water Research (IDAEA-CSIC). Jordi Girona, 18. 08034 Barcelona, Spain (1)