Hsu L L - OmicsDI

Show results for

Unknown (2307)
Transcriptomics (210)
Proteomics (58)
Metabolomics (22)
Genomics (19)
Multiomics (2)
Models (1)
Genomic (1)

Organisms

Homo sapiens (135)
Mus musculus (74)
Arabidopsis thaliana (18)
Glycine max (10)
Saccharomyces cerevisiae (5)
Escherichia coli (4)
Populus deltoides (3)
Trichoderma reesei (3)
Caenorhabditis elegans (3)
Oryza sativa (2)
Populus tremula x Populus alba (2)
Rattus norvegicus (2)
Danio rerio (2)
Solanum pimpinellifolium (2)
Gallus gallus (2)
Zymoseptoria tritici (1)
Saccharomyces cerevisiae x Saccharomyces mikatae (1)
Populus tremula x Populus tremuloides (1)
Bos taurus (1)
Anas platyrhynchos (1)
Candida albicans (1)
Sus scrofa (1)
Drosophila melanogaster (1)
Solanum lycopersicum (1)
Bacteroides thetaiotaomicron (1)
SARS coronavirus WHU (1)
Thermochaetoides thermophila (1)

Organisms

Homo sapiens (1)
Mus musculus (1)

Repository

biostudies-arrayexpress (229)
pride (30)
MetaboLights (20)
MassIVE (13)
jPOST (6)
PanoramaPublic (5)
GNPS (2)
ENA (2)
BioModels (1)
dbGaP (1)
EGA (1)
geo (1)

Tissue

Cell culture (9)
Seedling (3)
Whole plant (3)
Epithelial cell (2)
Plant cell (2)
Blood (1)
Blood plasma (1)
Fibroblast (1)
HeLa cell (1)
Hypocotyl (1)
Leaf (1)
Lung (1)
Monocyte (1)
Neutrophil (1)
Permanent cell line cell (1)
Prostate cancer cell line (1)
Respiratory mucus (1)
T cell (1)

Disease

Bacterial infectious disease (1)
Breast cancer (1)
COVID-19 (1)
Disease free (1)

Technology Type

Mass Spectrometry (30)
Shotgun proteomics (19)
Mass spectrometry (18)
Affinity purification coupled with mass spectrometry proteomics (4)
Bottom-up proteomics (3)
Data-dependent acquisition (3)
Mass spectrometry assay (2)
Gel-based experiment (2)
Affinity proteomics (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
MSE (1)
SRM/MRM (1)
Top-down proteomics (1)

Instrument Platform

Illumina NovaSeq 6000 (11)
Illumina HiSeq 2000 (10)
Liquid Chromatography MS - positive - reverse phase (10)
N/A (6)
Q Exactive Plus (5)
Chromium Next GEM Single Cell Multiome ATAC + Gene Expression Reagent Bundle, (4)
Illumina HiSeq 2500 (4)
Liquid Chromatography MS - negative - reverse phase (4)
10X Genomics reagent kit (3)
Orbitrap Fusion Lumos (3)
10X Chromium Nuclei Isolation Kit (2)
LTQ FT (2)
Orbitrap Eclipse (2)
Q Exactive (2)
Liquid Chromatography MS - negative - hilic (2)
10X Chromium On-Chip Multiplex (1)
Chromium Next GEM Single Cell Multiome Reagent Bundle (1)
10X Genomics reagents (1)
GeneChip Scanner 3000 (1)
454 GS 20 (1)
Illumina Genome Analyzer IIx (1)
Illumina NovaSeq X (1)
Illumina MiSeq (1)
MaXis (1)
LTQ Orbitrap Elite (1)
LTQ Orbitrap Velos (1)
Q Exactive HF (1)
Q Exactive HF-X (1)
TripleTOF 5600+ (1)
UltiMate 3000 RSLCnano system (Thermofisher) coupled with Orbitrap Fusion Lumos Mass Spectrometer (Thermofisher) (1)

Publication Date

2013 (39)
2015 (34)
2023 (27)
2011 (26)
2012 (25)
2010 (25)
2014 (24)
2016 (21)
2021 (13)
2025 (10)
2020 (8)
2024 (7)
2008 (7)
2026 (6)
2019 (6)
2018 (6)
2017 (6)
2022 (5)
2009 (5)
2007 (2)
2006 (2)

UNIPROT ID/AC

O00187 (1)
P01024 (1)
P02741 (1)
P04003 (1)
P06681 (1)
P0C0L4 (1)
P0C0L5 (1)
Q15485 (1)

CHEBI ID

CHEBI:15891 (5)
CHEBI:16359 (4)
CHEBI:16610 (4)
CHEBI:26078 (4)
CHEBI:137271 (3)
CHEBI:15318 (3)
CHEBI:15978 (3)
CHEBI:16196 (3)
CHEBI:16235 (3)
CHEBI:16335 (3)
CHEBI:16708 (3)
CHEBI:16811 (3)
CHEBI:17368 (3)
CHEBI:17561 (3)
CHEBI:18257 (3)
CHEBI:2376 (3)
CHEBI:26806 (3)
CHEBI:27732 (3)
CHEBI:28619 (3)
CHEBI:28865 (3)
CHEBI:28997 (3)
CHEBI:30769 (3)
CHEBI:30797 (3)
CHEBI:30882 (3)
CHEBI:34900 (3)
CHEBI:35038 (3)
CHEBI:45969 (3)
CHEBI:49033 (3)
CHEBI:18132 (1)
CHEBI:506227 (1)

Metabolite Name

Succinate (4)
Caffeine (3)
Cholic acid (3)
Tris(2-butoxyethyl) phosphate (3)
(2S,3S,4S,5R,6R)-6-[[(3S,4S,6aR,6bS,8aR,9R,12aS,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid (2)
1,1,1-Trichloroethane (2)
1,3,5-Trithiane (2)
1,3-Diphenylpropane (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
10Z-Nonadecenoic acid (2)
2,2',4,4',5,6'-Hexabromodiphenyl ether (2)
2,6-Di-tert-butyl-4-hydroxymethylphenol (2)
2-Hexaprenyl-6-methoxyphenol (2)
2-Hydroxyestradiol-3-methyl ether (2)
3-(4-Hydroxy-3,5-diiodophenyl)lactic acid (2)
3-Iodothyronamine (2)
3-Oxotetradecanoyl-CoA (2)
3-Phosphoadenylylselenate (2)
3H-1,2-Dithiole-3-thione (2)
5-Chloroorsellinic acid (2)
5-Diphosphoinositol pentakisphosphate (2)
5-Methylthioribose (2)
6-phosphogluconate (2)
9(10)-EpOME (2)
AMP (2)
Acarbose (2)
Acetoacetyl-CoA (2)
Acetyl-CoA (2)
Acrylyl-CoA (2)

First Public Date

2014 (2)

Modelling Approach

Ordinary differential equation model (1)

Lab affiliation

Genomics Research Center, Academia Sinica, Taipei, 11529 Taiwan (3)
Carnegie Mass Spectrometry Facility (2)
1Department of Pathology, Dana-Farber/Harvard Cancer Center, PhD Program in Immunology, Harvard Medical School; Department of Laboratory Medicine, Boston Children's Hospital, Enders Research Building, Room 811, Boston, MA, 02115, USA (1)
Associate Professor Stephen F. and Fay Evans Martin Endowed Professorship in Chemistry CPRIT Scholar Department of Chemistry University of Texas at Austin (1)
Carnegie Institution for Science (1)
Case Western Reserve University (1)
Chan Zuckerberg Biohub (1)
Department of Biochemistry, Purdue University (1)
Department of Biochemistry, Purdue University, West Lafayette, IN USA (1)
Department of Cancer Biology, Wake Forest Baptist Hospital (1)
Department of Molecular Genetics, Erasmus University Medical Center, Rotterdam, The Netherlands. Erasmus MC Cancer Institute, The Netherlands. Oncode Institute, Utrecht, The Netherlands. (1)
Department of Molecular Microbiology, Washington University School of Medicine, St Louis, Missouri, United States of America (1)
Department of Pathology, Dana-Farber/Harvard Cancer Center, Harvard Medical School; Department of Laboratory Medicine, Boston Children's Hospital, Enders Research Building, Room 811, Boston, MA, 02115, USA. (1)
Department of Radiology Canary Center at Stanford for Cancer Early Detection Stanford School of Medicine Stanford University (1)
Fujian Agriculture and Forestry University (1)
Human Immunological Diseases Section, Laboratory of Clinical Immunology and Microbiology, Division of Intramural Research, NIAID, NIH, Department of Health and Human Services, Unites States Government (1)
Institute of Biochemical Sciences, National Taiwan University and Institute of Biological Chemistry, Academia Sinica (1)
Institute of Molecular and Cellular Biology, National Taiwan University, Taipei, Taiwan (1)
Institute of Plant and Microbial Biology, Academia Sinica (1)
Leibniz Institute on Aging – Fritz Lipmann Institute (FLI), Beutenbergstrasse 11, 07745 Jena, Germany (1)
Mass Spectrometry Research and Support Group Epigenetics and Stem Cell Biology Laboratory National Institute of Environmental Health Sciences 111 TW Alexander Drive MD F0-04 Research Triangle Park, North Carolina 27709 (1)
Max-Planck-Institut für Molekulare Pflanzenphysiologie (1)
Shanghai Center for Plant Stress Biology (1)
Sonja Hess, Dr. rer. nat. Director, Dynamic Omics AstraZeneca R&D Antibody Discovery and Protein Engineering One Medimmune Way, Gaithersburg, MD 20878 (1)
State Key Laboratory of Coordination Chemistry, School of Chemistry and Chemical Engineering, Chemistry and Biomedicine Innovation Center (ChemBIC), Nanjing University, Nanjing, China (1)
University of Cologne, Center for Biochemistry, Cologne, germany (1)
Washington University in St. Louis - School of Medicine Division of Endocrinology, Metabolism & Lipid Research (1)