Hu Fan F - OmicsDI

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Unknown (1079)
Proteomics (40)
Metabolomics (8)
Transcriptomics (7)
Genomics (4)

Organisms

Homo sapiens (18)
Bombyx mori (16)
Onchocerca volvulus (16)
Klebsiella pneumoniae (16)
Musca domestica (16)
Brugia malayi (16)
Schizosaccharomyces pombe (16)
Cnidaria (16)
Streptomyces coelicolor A3(2) (16)
Sus scrofa (16)
Human immunodeficiency virus 1 (16)
Oryza sativa Indica Group (16)
Sinorhizobium meliloti BL225C (16)
Vitis (16)
Sus scrofa domesticus (16)
Ostreococcus tauri (16)
Saccharomyces cerevisiae (16)
Synechocystis sp. PCC 6803 (16)
Olavius algarvensis Gamma 1 endosymbiont (16)
Vitis vinifera (16)
Saccharopolyspora erythraea (16)
Staphylococcus aureus (16)
Rattus norvegicus (16)
Mus musculus (10)
Macaca mulatta (1)
Schizochytrium sp. TIO1101 (1)
Platymeris biguttatus (1)
Severe acute respiratory syndrome coronavirus 2 (1)
Apis mellifera (1)
Rattus norvegicus (1)

Repository

iProX (22)
pride (16)
biostudies-arrayexpress (10)
MetaboLights (8)
EGA (1)
jPOST (1)
MassIVE (1)

Tissue

Cell culture (3)
Keratinocyte (2)
Skin (2)
Blood plasma (2)
Liver (2)
T-cell acute lymphoblastic leukemia cell (1)
Uterine endometrial cancer cell (1)
Endocrine pancreas (1)
Type B pancreatic cell (1)
Plant cell (1)
Bone marrow (1)
Stem cell (1)
Whole body (1)
Leaf (1)
Hepatocyte (1)
Permanent cell line cell (1)
T cell (1)

Disease

Hepatocellular carcinoma (2)
Endometrial Endometrioid Adenocarcinoma (1)
Insulinoma (1)
Brain glioblastoma multiforme (1)
Chronic myeloid leukemia (1)
Acute leukemia (1)

Technology Type

Mass Spectrometry (16)
Mass spectrometry (8)
Shotgun proteomics (6)
Bottom-up proteomics (4)
Gel-based experiment (3)
Data-dependent acquisition (3)
Proteogenomics (1)
Mass spectrometry imaging (1)
Affinity purification coupled with mass spectrometry proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (6)
Liquid Chromatography MS - negative - reverse phase (5)
Liquid Chromatography MS - negative - hilic (2)
MA900, Sony (1)
10x Chromium Controller (1)
Illumina NovaSeq 6000 (1)
6550 iFunnel Q-TOF LC/MS (1)
Direct infusion MS - negative (1)
Direct infusion MS - positive (1)
Xevo G2 QTOF (Waters) (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2023 (7)
2025 (7)
2022 (7)
2024 (4)
2021 (4)
2014 (3)
2026 (3)
2020 (3)
2019 (3)
2016 (1)
2015 (1)
2012 (1)
2011 (1)
2010 (1)
2009 (1)
2017 (1)

CHEBI ID

CHEBI:15676 (4)
CHEBI:16335 (4)
CHEBI:16347 (4)
CHEBI:17596 (4)
CHEBI:21949 (3)
CHEBI:17768 (3)
CHEBI:46961 (3)
CHEBI:75145 (3)
CHEBI:25094 (3)
CHEBI:73718 (3)
CHEBI:15760 (3)
CHEBI:28867 (3)
CHEBI:16870 (3)
CHEBI:17748 (3)
CHEBI:15741 (3)
CHEBI:17154 (3)
CHEBI:16196 (3)
CHEBI:27248 (3)
CHEBI:15940 (3)
CHEBI:17509 (3)
CHEBI:17750 (3)
CHEBI:73024 (3)
CHEBI:16467 (3)
CHEBI:27480 (3)
CHEBI:16704 (3)
CHEBI:30915 (3)
CHEBI:16919 (3)
CHEBI:15354 (3)
CHEBI:16020 (3)
CHEBI:64563 (3)

Metabolite Name

Betaine (3)
Propionylcarnitine (3)
Niacinamide (3)
Phytosphingosine (3)
Choline (3)
Adenosine (3)
L-Carnitine (3)
Isovalerylglutamic acid (2)
PC(P-16:0/20:3(5Z,8Z,11Z)) (2)
LysoPC(15:0) (2)
Dehydrophytosphingosine (2)
Trans-Hexadec-2-enoyl carnitine (2)
Elaidic carnitine (2)
PC(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/18:3(6Z,9Z,12Z)) (2)
Polyoxyethylene dioleate (2)
LysoPE(20:4(8Z,11Z,14Z,17Z)/0:0) (2)
C17 Sphinganine (2)
C16 Sphinganine (2)
Terbutaline (2)
Montecristin (2)
(2R,3R,4R)-2-Amino-4-hydroxy-3-methylpentanoic acid (2)
Schleicherastatin 5 (2)
LysoPE(0:0/18:3(6Z,9Z,12Z)) (2)
LysoPE(0:0/20:3(11Z,14Z,17Z)) (2)
N-Methylcalystegine B2 (2)
Stearoylcarnitine (2)
Hexylamine (2)
PC(20:2(11Z,14Z)/15:0) (2)
Taurodeoxycholic acid (2)
Arabinosylhypoxanthine (2)

Study type

Transcription profiling by array (3)
Methylation profiling by high throughput sequencing (2)
RNA-seq of coding RNA (2)
ChIP-seq (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (174)
2022 (147)
2024 (142)
2023 (138)
2021 (124)
2020 (89)
2018 (61)
2019 (46)
2017 (35)
2016 (29)
2015 (25)
2026 (23)
2014 (21)
2012 (8)
2013 (8)
2011 (7)
2008 (6)
2010 (3)
2009 (2)
2007 (1)

Lab affiliation

Department of Gynecological Oncology, Tongji Hospital, Tongji Medical College,Huazhong University of Science and Technology (1)
Department of Hematology, The Affiliated Cancer Hospital of Zhengzhou University & Henan Cancer Hospital, Zhengzhou, China (1)
Department of Clinical Laboratory, National Center for Respiratory Medicine, National Clinical Research Center for Respiratory Disease, State Key Laboratory of Respiratory Disease, Guangzhou Institute of Respiratory Health, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou, Guangdong 510120, China. (1)
Institute of Systems Biomedicine, School of Basic Medical Sciences, Peking University Health Science Center, Beijing, China (1)
TongJi Hospital, Huazhong University of Science and Technology (1)
Precision Research Center for Refractory Diseases, Shanghai General Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China. (1)
Precision Research Center for Refractory Diseases, Shanghai General Hospital,Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China. (1)
Lushan Botanical Garden, Jiangxi Province and Chinese Academy of Sciences (1)
Professor of Human Molecular Metabolism, dr.med. (MD, Doctor of Medical Science), Chief Research Physician, Specialist in Endocrinology, Herlev-Gentofte University Hospital, Department of Clinical Medicine, and Novo Nordisk Foundation Center for Basic Metabolic Research, Faculty of Health and Medical Science, University of Copenhagen, Copenhagen, Denmark (1)
State Key Laboratory of Proteomics, National Center for Protein Sciences Beijing, 38 Life Science Park Road, Beijing 102206, P.R. China (1)
Gannan Normal University (1)
Nanjing Medical University (1)
Institute of Pediatric Research, Children's Hospital of Soochow University, Suzhou, China. (1)
State Key Laboratory of Proteomics, National Center for Protein Sciences Beijing, 38 Life Science Park Road, Beijing 102206, P.R. China. (1)
Shanghai Institute of Materia Medica, Chinese Academy of Sciences (1)
Department of Medicine, Section of Endocrinology Tulane University (1)

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Multi-omics association analysis reveals interactions between the oropharyngeal microbiome and the metabolome in pediatric patients with influenza A virus pneumonia.

Children are at high risk for influenza A virus (IAV) infections, which can develop into severe illnesses. However, little is known about interactions between the microbiome and respiratory tract metabolites and their impact on the development of IAV pneumonia in children. Using a combination of liq...

2024-09-25 | MTBLS4816 | MetaboLights

CREB1 Is Involved in miR-134-5p-Mediated Endometrial Stromal Cell Proliferation, Apoptosis, and Autophagy.

Not available

S-EPMC10649013 | biostudies-literature

Genome-Wide Analysis Reveals Extensive Changes in LncRNAs during Skeletal Muscle Development in Hu Sheep.

Not available

S-EPMC5575655 | biostudies-literature

A compact VEGF signature associated with distant metastases and poor outcomes

Results When compared with each other, primary tumors and regional metastases showed statistically indistinguishable gene expression patterns. Supervised analyses comparing patients with distant metastases versus primary tumors or regional metastases showed that the distant metastases were distinct...

ORGANISM(S): Homo sapiens

2009-03-31 | E-GEOD-3521 | biostudies-arrayexpress

An evaluation of the stability of image-quality parameters of Varian on-board imaging (OBI) and EPID imaging systems.

Not available

S-EPMC5690094 | biostudies-literature

The complete chloroplast genome of weedy rice Oryza sativa f. spontanea.

Not available

S-EPMC8462929 | biostudies-literature

Isolation, Identification and Hyperparasitism of a Novel Cladosporium cladosporioides Isolate Hyperparasitic to Puccinia striiformis f. sp. tritici, the Wheat Stripe Rust Pathogen.

Not available

S-EPMC9219750 | biostudies-literature

Evaluating the Implementation of fan-beam CT-guided online adaptive re-planning in definitive cervical cancer radiotherapy.