Huang Dong D - OmicsDI

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Unknown (1545)
Proteomics (54)
Transcriptomics (29)
Metabolomics (25)
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Other (1)

Organisms

Homo sapiens (35)
Andropogon gerardi (18)
Bacteria (18)
Bartonella quintana JK 31 (18)
Canis lupus familiaris (18)
Cnidaria (18)
Ensifer adhaerens (18)
Halictus scabiosae (18)
Human alphaherpesvirus 1 strain 17 (18)
Human alphaherpesvirus 1 strain KOS (18)
Human betaherpesvirus 5 (18)
Human herpesvirus 2 strain 186 (18)
Mesocricetus auratus (18)
Miscanthus x giganteus (18)
Mus musculus (18)
Panicum virgatum (18)
Platyhelminthes (18)
Pseudomonas aeruginosa PA103 (18)
Mus musculus (17)
Ovis aries (3)
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Drosophila melanogaster (2)
Tardigrada (2)
Aureococcus anophagefferens (1)
Brassica oleracea (1)
Caenorhabditis elegans (1)
Arabidopsis thaliana (1)
Macaca mulatta (1)
Staphylococcus aureus (1)

Repository

iProX (34)
biostudies-arrayexpress (32)
MetaboLights (23)
pride (18)
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GNPS (2)

Tissue

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Disease

Colon cancer (1)
Liver cancer (1)

Technology Type

Mass spectrometry (21)
Mass Spectrometry (18)
Shotgun proteomics (8)
Affinity purification coupled with mass spectrometry proteomics (3)
Data-independent acquisition (3)
Data-dependent acquisition (2)
NMR spectroscopy (1)
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Instrument Platform

N/A (6)
Illumina NovaSeq 6000 (6)
Liquid Chromatography MS - negative - reverse phase (6)
Liquid Chromatography MS - positive - reverse phase (6)
Chromium Next GEM Single Cell Multiome ATAC + Gene Expression Reagent Bundle, (4)
Liquid Chromatography MS - positive - hilic (4)
10X Genomics reagent kit (3)
Q Exactive (3)
Liquid Chromatography MS - negative (3)
10X Chromium Nuclei Isolation Kit (2)
TOF Pegasus HT (LECO) (2)
Liquid Chromatography MS - positive (2)
Liquid Chromatography MS - negative - hilic (2)
Chromium Next GEM Single Cell Multiome Reagent Bundle (1)
10X Genomics reagents (1)
10X Chromium On-Chip Multiplex (1)
Illumina HiSeq 2500 (1)
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Q Exactive HF (1)
Xevo TQ MS (Waters) (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)
Direct infusion MS - negative (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Direct infusion MS - positive (1)
Xevo G2 QTOF (Waters) (1)
Bruker (1)
Liquid Chromatography MS - alternating - reverse phase (1)

Publication Date

2024 (14)
2025 (13)
2022 (12)
2014 (11)
2023 (10)
2021 (10)
2019 (8)
2017 (6)
2020 (6)
2026 (5)
2013 (4)
2016 (3)
2012 (3)
2015 (2)
2010 (2)
2018 (2)
2011 (1)

CHEBI ID

CHEBI:16708 (8)
CHEBI:15354 (8)
CHEBI:16704 (7)
CHEBI:17562 (7)
CHEBI:16347 (7)
CHEBI:17368 (7)
CHEBI:30769 (7)
CHEBI:22660 (6)
CHEBI:17748 (6)
CHEBI:17859 (6)
CHEBI:6650 (6)
CHEBI:32816 (6)
CHEBI:7916 (6)
CHEBI:16750 (6)
CHEBI:18012 (6)
CHEBI:17154 (6)
CHEBI:17895 (6)
CHEBI:15756 (6)
CHEBI:28918 (5)
CHEBI:17822 (5)
CHEBI:16811 (5)
CHEBI:24898 (5)
CHEBI:16610 (5)
CHEBI:28790 (5)
CHEBI:17780 (5)
CHEBI:116314 (5)
CHEBI:17597 (5)
CHEBI:30887 (5)
CHEBI:15891 (5)
CHEBI:18237 (5)

Metabolite Name

Pyruvic acid (5)
Palmitic acid (5)
Xanthosine (4)
L-Proline (4)
Gluconic acid (4)
Citric acid (4)
L-Glutamine (4)
Glutaric acid (4)
D-Mannose (4)
Adenine (4)
Cytidine (4)
Thymidine (4)
Uridine (4)
L-Valine (4)
Hypoxanthine (4)
D-Galactose (3)
Agmatine (3)
N-Acetyl-D-glucosamine (3)
Proline (3)
Valine (3)
Uracil (3)
Myristoleic acid (3)
Indoxyl sulfate (3)
Citrulline (3)
5-Hydroxy-L-tryptophan (3)
4-Pyridoxic acid (3)
Nicotinic acid (3)
L-Malic acid (3)
Benzoic acid (3)
L-Asparagine (3)

Study type

RNA-seq of coding RNA (13)
Transcription profiling by array (8)
Single nucleus RNA sequencing (4)
Methylation profiling by high throughput sequencing (3)
Other (2)
ScATAC-seq (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2025 (254)
2022 (214)
2023 (199)
2021 (171)
2024 (170)
2020 (133)
2019 (88)
2017 (57)
2015 (55)
2016 (50)
2018 (49)
2026 (40)
2014 (33)
2013 (21)
2012 (15)
2011 (11)
2010 (8)
2009 (3)
2006 (2)
2008 (1)
2007 (1)
2005 (1)
2004 (1)

Lab affiliation

Tsinghua University, China (4)
Beijing Key Laboratory of Gene Resource and Molecular Development, College of Life Sciences, Beijing Normal University, Beijing China (1)
Brain Tumor Center, Division of Experimental Hematology and Cancer Biology, Cincinnati Children’s Hospital Medical Center, Cincinnati, OH 45229, USA (1)
Department of Bioinformatics, School of Basic Medical Sciences, Southern Medical University, Guangzhou, China (1)
Department of Liver Surgery and Transplantation, Liver Cancer Institute, Zhongshan Hospital, Fudan University; Key Laboratory of Carcinogenesis and Cancer Invasion of Ministry of Education, Key Laboratory of Medical Epigenetics and Metabolism, Institutes of Biomedical Sciences, Fudan University, Shanghai 200032, China (1)
Department of Medicine, Columbia University Irving Medical Center (1)
EDyP (1)
GIBH (1)
Institute of Molecular Systems Biology, ETH Zürich, Switzerland (1)
National Yang-Ming University Proteomics Research Center,Taiwan (1)
School of Pharmacy, Uninvesity of Wisconsin-Madison (1)
State Key Laboratory of Molecular Developmental Biology, Institute of Genetics an Developmental Biology, Chinese Academy of Sciences (1)
Sugarcane Research Institute, Guangxi Academy of Agricultural Sciences (1)
Translational Medical Center for Stem Cell Therapy and Institute for Regenerative Medicine, Medical Innovation Center and State Key Laboratory of Cardiology, Shanghai East Hospital, Clinical and Translational Research Center of Shanghai First Maternity & Infant Hospital, Frontier Science Center for Stem Cell Research, School of Life Sciences and Technology, Sports and Health Research Center, Tongji University Department of Physical Education, Tongji University, Shanghai 200092, China (1)
Tsinghua University (1)

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Comprehensive analyses of genetic diversities and population structure of the Guizhou Dong group based on 44 Y-markers.

Not available

S-EPMC10538297 | biostudies-literature

Germplasm Resources and Genetic Breeding of Huang-Qi (Astragali Radix): A Systematic Review.

Not available

S-EPMC11351161 | biostudies-literature

Identification of specific proteins and metabolic networks associated with sucrose accumulation in sugarcane

The rate of improvement of sugar content in sugarcane remains low for decades worldwide. Our previous transcriptome studies provided an atlas of sucrose accumulation-related gene expression but little is known about proteins involved. Here this knowledge gap is addressed by a proteomic analysis of e...

ORGANISM(S): Saccharum spp. complex hybrid

2022-08-12 | PXD024569 | Pride