Huang Xu X - OmicsDI

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Unknown (11335)
Proteomics (254)
Transcriptomics (42)
Genomics (34)
Metabolomics (32)
Other (1)

Organisms

Homo sapiens (96)
Mus musculus (34)
Citrus sinensis (3)
Rattus rattus (3)
Ovis aries (2)
Rattus norvegicus (2)
Arabidopsis thaliana (2)
Drosophila melanogaster (2)
Gallus gallus (2)
Pseudomonas aeruginosa M18 (1)
Nannochloropsis oceanica (1)
Hevea brasiliensis (1)
Epinephelus tauvina (1)
Brassica oleracea (1)
Siniperca chuatsi (1)
Clonorchis sinensis (1)
Drosophila simulans (1)
Toxoplasma gondii (1)
Macaca fascicularis (1)
Setaria italica (1)
Amphioctopus fangsiao (1)
Campylobacter jejuni (1)
Eimeria maxima (1)
Eupatorium cannabinum (1)
Iranian hemp witches'-broom phytoplasma (1)
Morchella sextelata (1)
Oryctolagus cuniculus (1)
Riemerella anatipestifer RA-YM (1)
Saccharomyces cerevisiae (1)
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (1)

Repository

pride (158)
iProX (89)
biostudies-arrayexpress (54)
MetaboLights (32)
EGA (22)
MassIVE (5)
GPMDB (1)
jPOST (1)
PAXDB (1)

Tissue

Cell culture (42)
Brain (13)
Epithelial cell (10)
Liver (7)
Whole body (7)
Blood cell (6)
Hepatocyte (6)
Leaf (5)
Permanent cell line cell (5)
B cell (4)
Bone marrow (4)
Testis (4)
Blood plasma (3)
Blood serum (3)
Embryo (3)
HeLa cell (3)
Kidney (3)
Lung (3)
Photosynthetic cell (3)
Blood (2)
Byssus (2)
CNS neuron (sensu Vertebrata) (2)
Early embryonic cell (2)
Embryonic stem cell (2)
Mantle (2)
Plant cell (2)
Skeletal muscle (2)
Spleen (2)
Stem cell (2)
Stomach (2)

Disease

Disease free (5)
Breast cancer (4)
Hepatocellular carcinoma (3)
Stomach cancer (3)
Autism spectrum disorder (2)
COVID-19 (2)
Colon cancer (2)
Non-alcoholic steatohepatitis (2)
Stomach carcinoma (2)
Type 2 diabetes mellitus (2)
Not Available (1)
Acute leukemia (1)
Alopecia (1)
Aortic dissection (1)
Bacterial infectious disease (1)
Brain glioma (1)
Cervix carcinoma (1)
Cholangiocarcinoma (1)
Chronic myeloid leukemia (1)
Diffuse large B-cell lymphoma (1)
Ewing sarcoma of bone (1)
Liver cancer (1)
Melanoma (1)
Parkinson's disease (1)
Polycystic Kidney (1)
Prostate adenocarcinoma (1)
Prostate cancer (1)
Severe acute respiratory syndrome (1)
Wiskott-Aldrich syndrome (1)

Technology Type

Mass Spectrometry (158)
Shotgun proteomics (76)
Bottom-up proteomics (31)
Mass spectrometry (30)
Data-dependent acquisition (17)
Gel-based experiment (14)
Affinity purification coupled with mass spectrometry proteomics (13)
Data-independent acquisition (8)
SWATH MS (6)
All-ion fragmentation (4)
Top-down proteomics (4)
Mass spectrometry assay (2)
Affinity proteomics (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
MSE (2)
Olink affinity proteomics (2)
SRM/MRM (2)
CAPILLARY, AB 3730xL Genetic Analyzer (1)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
DiaPASEF (1)
Mass spectrometry imaging (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (16)
Liquid Chromatography MS - negative - reverse phase (13)
Liquid Chromatography MS - negative - hilic (4)
Illumina NovaSeq 6000 (3)
Liquid Chromatography MS - positive - hilic (3)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (2)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (2)
Liquid Chromatography MS - alternating - reverse phase (2)
Hamamatsu Nanozoomer S60 (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 2000 (1)
Instrument (1)
Agilent 6495B QQQ mass spectrometer (1)
LTQ Orbitrap Velos (1)
Orbitrap Fusion Lumos (1)
Q Exactive (1)
Q Exactive HF (1)
Liquid Chromatography MS - Negative (LC-MS (NEG)) (1)
Liquid Chromatography MS - Positive (LC-MS (POS)) (1)
MaXis (Bruker) (1)
Liquid Chromatography MS - alternating – hilic (1)
Agilent 7890A+LECO Chroma TOF PEGASUS HT (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - alternating - hilic (1)
Xevo G2 QTOF (Waters) (1)
Liquid Chromatography MS - negative - HILIC (1)

Publication Date

2022 (47)
2025 (38)
2026 (33)
2021 (32)
2023 (26)
2024 (20)
2014 (17)
2018 (14)
2020 (14)
2019 (13)
2013 (9)
2016 (8)
2015 (7)
2017 (7)
2011 (5)
2010 (3)
2012 (2)
2009 (1)

UNIPROT ID/AC

89462.XP_006039585.1 (1)
89462.XP_006039600.1 (1)
89462.XP_006039626.1 (1)
89462.XP_006039630.1 (1)
89462.XP_006039638.1 (1)
89462.XP_006039640.1 (1)
89462.XP_006039668.1 (1)
89462.XP_006039674.1 (1)
89462.XP_006039692.1 (1)
89462.XP_006039695.1 (1)
89462.XP_006039696.1 (1)
89462.XP_006039697.1 (1)
89462.XP_006039706.1 (1)
89462.XP_006039712.1 (1)
89462.XP_006039721.1 (1)
89462.XP_006039726.1 (1)
89462.XP_006039730.1 (1)
89462.XP_006039752.1 (1)
89462.XP_006039756.1 (1)
89462.XP_006039757.1 (1)
89462.XP_006039762.1 (1)
89462.XP_006039763.1 (1)
89462.XP_006039783.1 (1)
89462.XP_006039794.1 (1)
89462.XP_006039815.1 (1)
89462.XP_006039816.1 (1)
89462.XP_006039820.1 (1)
89462.XP_006039846.1 (1)
89462.XP_006039847.1 (1)
89462.XP_006039864.1 (1)

CHEBI ID

CHEBI:28875 (12)
CHEBI:15354 (11)
CHEBI:17895 (11)
CHEBI:15756 (11)
CHEBI:16828 (11)
CHEBI:17368 (11)
CHEBI:16708 (10)
CHEBI:17568 (10)
CHEBI:16704 (10)
CHEBI:17295 (10)
CHEBI:28716 (10)
CHEBI:17351 (10)
CHEBI:17154 (9)
CHEBI:16467 (9)
CHEBI:24813 (9)
CHEBI:16919 (9)
CHEBI:16347 (9)
CHEBI:17596 (9)
CHEBI:30769 (9)
CHEBI:16040 (8)
CHEBI:17405 (8)
CHEBI:15891 (8)
CHEBI:17748 (8)
CHEBI:16335 (8)
CHEBI:17750 (8)
CHEBI:17964 (8)
CHEBI:32816 (8)
CHEBI:30805 (8)
CHEBI:16750 (8)
CHEBI:55328 (8)

Metabolite Name

Uracil (8)
Hypoxanthine (8)
L-Arginine (7)
Choline (7)
Adenosine (7)
Creatine (7)
L-Proline (6)
Guanine (6)
Cytosine (6)
Adenine (6)
Thymidine (6)
L-Citrulline (5)
Acetylcholine (5)
Nicotinamide (5)
Indole (5)
Spermidine (5)
Palmitic acid (5)
L-Tryptophan (5)
Azelaic acid (5)
Cytidine (5)
Guanosine (5)
Uridine (5)
Creatinine (5)
L-Tyrosine (5)
L-Pipecolic acid (4)
L-Alanine (4)
Betaine (4)
Benzaldehyde (4)
Syringic acid (4)
Piperidine (4)

Modification

Not available (1)

Study type

RNA-seq of coding RNA (23)
Transcription profiling by array (10)
Methylation profiling by high throughput sequencing (7)
ChIP-seq (5)
RNA-seq of non coding RNA (5)
RNA-seq of coding RNA from single cells (3)
Genotyping by high throughput sequencing (1)

Release Date

2025 (1974)
2022 (1605)
2023 (1467)
2024 (1458)
2021 (1270)
2020 (832)
2019 (567)
2018 (426)
2017 (408)
2016 (291)
2015 (277)
2026 (260)
2014 (220)
2013 (115)
2012 (90)
2011 (59)
2010 (28)
2009 (19)
2008 (7)
2007 (7)
2005 (3)
2002 (3)
2006 (2)
2001 (1)

Lab affiliation

Key Lab of Integrated Crop Pest Management of Shandong, College of Plant Health and Medicine, Qingdao Agricultural University, Qingdao, China (4)
Affiliation of Qiutao Xu: State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Agriculture, Guangxi University, Nanning 530004, China (3)
Shanghai Institute of Hematology, State Key Laboratory of Medical Genomics, Collaborative Innovation Center of Hematology, National Research Center for Translational Medicine at Shanghai, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai 200000, China (3)
State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, No.1 West Beichen Rd., Beijing 100101, China. (3)
Zhejiang University (3)
Department of Biomedical Engineering, College of Life Science and Technology, Huazhong University of Science and Technology, N0. 1037 Luoyudong Road, Hongshan District, Wuhan 430074 (2)
Department of Cardiology, Renmin Hospital of Wuhan University, Wuhan 430060, China (2)
Institute of Genetics & Developmental Biology, Chinese Academy of Sciences (2)
Key Laboratory of Modern Toxicology of Shenzhen, Shenzhen Center for Disease Control and Prevention, No. 8, Longyuan Road, Nanshan District, Shenzhen, China 518055. (2)
National Center for Advancing Translational Sciences, National Institutes of Health (2)
Ruijin Hospital, Shanghai Jiao Tong University School of Medicine (2)
Shenzhen Center for Disease Control and Prevention (2)
State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, No.1 West Beichen Rd., Beijing 100101, China (2)
The First Affiliated Hospital of Fujian Medical University (2)
Wenzhou Medical University (2)
Zhejiang Academy of Agricultural Sciences (2)
1Department of Pathology, Dana-Farber/Harvard Cancer Center, PhD Program in Immunology, Harvard Medical School; Department of Laboratory Medicine, Boston Children's Hospital, Enders Research Building, Room 811, Boston, MA, 02115, USA (1)
Aarhus University, Denmark (1)
Affiliation* Key Laboratory of Genetics and Breeding, Zhejiang Institute of Freshwater Fisheries, Huzhou, China (1)
Anhui Agricultural University (1)
Anhui Province Key Laboratory of Medical Physics and Technology, Institute of Health and Medical Technology, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, Anhui 230031, P. R. China University of Science and Technology of China, Hefei, Anhui 230026, P. R. China Hefei Cancer Hospital, Chinese Academy of Sciences, Hefei, Anhui 230031, P. R. China Precision Medicine Research Laboratory of Anhui Province, Hefei, Anhui 230088, P. R. China (1)
Assistant Professor, Biochemistry And Molecular Biology, School of Medicine, Tulane University (1)
Beijing Key Laboratory of DNA Damage Response and College of Life Science, Capital Normal University, Beijing 100048, China (1)
Bioscience Program, Biological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Kingdom of Saudi Arabia (1)
Brain Tumor Center, Division of Experimental Hematology and Cancer Biology, Cincinnati Children’s Hospital Medical Center, Cincinnati, OH 45229, USA (1)
Cancer Science Institute of Singapore, National University of Singapore (1)
Center for Regeneration and Aging,BGI-haangzhou (1)
Children's Hospital of Nanjing Medical University (1)
City of Hope medical centre, Diabetes Institute (1)
College of Agronomy, Henan Agricultural University/ National Engineering Research Center for Wheat/ Co-construction State Key Laboratory of Wheat and Maize Crop Science/ Collaborative Innovation Center of Henan Grain Crops (1)

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Differential effects of Huang-Lian-Jie-Du Decoction on Alzheimer’s disease and normal rats

Introduction: Huang-Lian-Jie-Du Decoction (HLJDD), a botanical drug used in traditional medicine, has been used in the management of Alzheimer’s disease (AD). However, the mechanisms underlying its preventive effects remain inadequately understood, particularly due to the absence of metabolomic s...

2025-11-04 | MTBLS13256 | MetaboLights

Classification of Strawberry Maturity Stages and Varieties Using Neural Networks Based on Volatile Organic Compounds.

Not available

S-EPMC11765290 | biostudies-literature

Expression data from testes and abdomen in fertile and sterile introgression males

Postmating reproductive isolation is often manifested as hybrid male sterility, for which X-linked genes are over-represented. In contrast, X-linked gene are significantly under-represented among testis-expressing gene.This seeming contradiction may be germane to the X:autosome imbalance hypothesis ...

ORGANISM(S): Drosophila simulans

2010-05-19 | E-GEOD-21734 | biostudies-arrayexpress

The Simultaneous Determination of Chlorpyrifos-Ethyl and -Methyl with a New Format of Fluorescence-Based Immunochromatographic Assay.

Not available

S-EPMC9688337 | biostudies-literature

Plasma metabolome alteration in dairy cows with left displaced abomasum before and after surgical correction

Left displaced abomasum (LDA) leads to substantial changes in the metabolism of dairy cows. Surgical correction of LDA can rapidly improve the health of cows; however, changes in metabolism following surgery are rarely described. To investigate the changes of plasma metabolome in cows with LDA befor...

2022-08-17 | MTBLS4126 | MetaboLights

HHLA2 and PD-L1 co-expression predicts poor prognosis in patients with clear cell renal cell carcinoma.

Not available

S-EPMC7057441 | biostudies-literature

Network pharmacological systems study of Huang-Lian-Tang in the treatment of glioblastoma multiforme.

Not available

S-EPMC7681198 | biostudies-literature

Functional analysis of a de novo mutation c.1692 del A of the PHEX gene in a Chinese family with X-linked hypophosphataemic rickets.

Not available

S-EPMC6719531 | biostudies-literature

Proteomics analysis of the membrane vesicles in Pseudomonas aeruginosa under X-ray irradiation

Pseudomonas aeruginosa, X-ray irradiation, inner membrane blebbing, membrane vesicles Almost all bacteria produce membrane vesicles (MVs) that have been found to be generally composed of lipopolysaccharides (LPSs), phospholipids (PLs), outer membrane proteins, periplasmic proteins and peptidoglycan ...

ORGANISM(S): Pseudomonas aeruginosa PAO1

2025-08-25 | PXD037062 | Pride

Metabolomics Analysis Reveals Tissue-Specific Metabolite Compositions in Leaf Blade and Traps of Carnivorous Nepenthes Plants

Nepenthes is a genus of carnivorous plants that evolved a pitfall trap, the pitcher, to catch and digest insect prey to obtain additional nutrients. Each pitcher is part of the whole leaf, together with a leaf blade. These two completely different parts of the same organ were studied separately in a...

2020-07-10 | MTBLS1783 | MetaboLights

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