Human bronchial epithelial cells

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Organisms

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Epithelial cell (25)
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Cell suspension culture (1)
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Disease

Cystic fibrosis (6)
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Pulmonary neuroendocrine tumor (2)
S enteritidis (1)
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Mass Spectrometry (48)
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Data-dependent acquisition (5)
Data-independent acquisition (5)
Affinity purification coupled with mass spectrometry proteomics (4)
Top-down proteomics (3)
Mass spectrometry (2)
NMR spectroscopy (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Gel-based experiment (1)
SWATH MS (1)

Instrument Platform

Affymetrix GeneChip Scanner 3000 7G (11)
Illumina NovaSeq 6000 (8)
Illumina HiSeq 2500 (5)
NextSeq 500 (4)
Q Exactive (4)
Illumina NovaSeq X (2)
N/A (2)
NextSeq 550 (2)
LTQ Orbitrap XL (2)
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Hamamatsu Nanozoomer S60 (1)
Chromium Next GEM Single Cell Multiome Reagent Bundle (1)
10X Genomics reagents (1)
10x chromium (1)
Chromium Next GEM Single Cell Multiome ATAC + Gene Expression Reagent Bundle, (1)
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Agilent (1)
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NanoDrop spectrophotometer (NanoDrop Technologies, Wilmington, DE) (1)
Dynamic light scattering and zeta potential. The experiments were performed on a Malvern Zetasizer NanoZS instrument using a He-Ne laser (Max, 5 mW) at 633 nm. (1)
Affymetrix GeneChip(R) HT Scanner (1)
Other (1)
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Illumina HiSeq 4000 (1)
- (1)
LTQ (1)
LTQ Orbitrap (1)

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2012 (56)
2013 (54)
2011 (47)
2015 (45)
2014 (45)
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2016 (38)
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2009 (31)
2010 (30)
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2024 (23)
2008 (22)
2019 (21)
2017 (19)
2007 (18)
2006 (11)
2005 (5)
2004 (1)

CHEBI ID

CHEBI:15428 (2)
CHEBI:28044 (2)
CHEBI:68440 (1)
CHEBI:155898 (1)
CHEBI:74795 (1)
CHEBI:28800 (1)
CHEBI:29987 (1)
CHEBI:29995 (1)
CHEBI:89930 (1)
CHEBI:17822 (1)
CHEBI:16709 (1)
CHEBI:26271 (1)
CHEBI:49033 (1)
CHEBI:25094 (1)
CHEBI:36313 (1)
CHEBI:27570 (1)
CHEBI:18186 (1)
CHEBI:26986 (1)
CHEBI:17234 (1)
CHEBI:28300 (1)
CHEBI:15760 (1)
CHEBI:27470 (1)
CHEBI:16283 (1)
CHEBI:16977 (1)
CHEBI:24898 (1)
CHEBI:25017 (1)
CHEBI:17154 (1)
CHEBI:17929 (1)
CHEBI:17780 (1)
CHEBI:17196 (1)

Metabolite Name

Prolylphenylalanine (1)
L-Cysteinylglycine disulfide (1)
5-oxo-proline (1)
2-Methylnicotinamide (1)
L-Cystine (1)
N-Acetylgalactosamine (1)
1-[(5-Amino-5-carboxypentyl)amino]-1-deoxyfructose (1)
Glycine (1)
Serine (1)
Proline (1)
Lysine (1)
Glutamate (1)
Aspartate (1)
Histidine (1)
Phenylalanine (1)
Tyrosine (1)
Threonine (1)
Glucose (1)
Glutamine (1)
Valine (1)
Isoleucine (1)
Leucine (1)
L-Alanine (1)
Glycine (1)
Betaine (1)
Pyroglutamic acid (1)
Niacinamide (1)
L-Lysine (1)
5-Hydroxy-L-tryptophan (1)
L-Proline (1)

First Public Date

2014 (93)
2024 (54)
2025 (49)
2023 (46)
2022 (40)
2020 (39)
2021 (38)
2026 (35)
2017 (23)
2018 (22)
2019 (21)
2016 (14)
2015 (13)
2013 (9)

Classification

viruses (4)
fungi (1)
bacteria (1)

Modification

2x(15)N labeled L-lysine (1)
4 (1)
4x(15)N labeled L-arginine (1)

Study type

Transcription profiling by array (243)
RNA-seq of coding RNA (27)
Methylation profiling by array (12)
ChIP-seq (7)
RNA-seq of coding RNA from single cells (7)
Unknown experiment type (4)
Comparative genomic hybridization by array (4)
Transcription profiling by RT-PCR (3)
RNA-seq of non coding RNA (3)
Other (2)
MicroRNA profiling by array (2)
Transcription profiling by SAGE (1)
ChIP-chip by tiling array (1)
Human - One-color microarray (1)
Cell line - High-throughput sequencing (1)
RIP-seq (1)
Single nucleus RNA sequencing (1)
RNA-seq of total RNA (1)

Release Date

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2015 (105)
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2011 (80)
2010 (55)
2009 (45)
2008 (41)
2007 (27)
2026 (22)
2006 (12)
2005 (8)
2000 (5)
2002 (4)
1998 (2)
2004 (1)
2003 (1)

Lab affiliation

Department of Biochemistry UT Southwestern Medical Center (2)
Institute for Research in Immunology and Cancer, Department of Biochemistry, Department of Chemistry, Université de Montréal, Québec, Canada H3T 1J4 (2)
Univ. Bordeaux, INSERM, CRCTB, U 1045, F-33000 Bordeaux, France (2)
Analytical Chemistry Lab, Istituto Italiano di Tecnologia, Via Morego 30, 16163, Genova, Italy (1)
Cambridge Centre for Proteomics, Department of Biochemistry, University of Cambridge, Tennis Court Road, Cambridge, UK (1)
Competence Center Functional Genomics, Junior Research Group Pathoproteomics, University of Greifswald, 17489 Greifswald, Germany (1)
Core Unit Proteomics, Berlin Institute of Health at Charite- Universitaetsmedizin Berlin and Max Delbrueck Center for Molecular Medicine (MDC), 13125 Berlin, Germany (1)
Department of Biochemistry and Molecular Biology, Oklahoma Center for Respiratory and Infectious Diseases, Oklahoma State University, Stillwater, Oklahoma, USA (1)
Department of Chemistry, University of Toronto, Toronto, ON, Canada, M5S 3H6 (1)
Department of Chemistry, Vanderbilt University, Nashville, TN, United States (1)
Department of Experimental Medical Science, Respiratory Immunopharmacology group, Biomedical Centre (BMC), Lund University (1)
Department of Food Chemistry and Toxicology, Institute of Applied Biosciences, Karlsruhe Institute of Technolog (KIT), Karlsruhe, Germany (1)
Department of Medical Biochemistry and Cell Biology, Institute of Biomedicine, Sahlgrenska Academy, Gothenburg University, Sweden. (1)
Department of Microgravity and Translational Regenerative Medicine, Otto-von-Guericke University Magdeburg, Universitätsplatz 2, 39106 Magdeburg, Germany (1)
Department of Oncology and Diagnostic Sciences, University of Maryland School of Dentistry, Baltimore MD (1)
Department of Oncology and Diagnostics Sciences University of Maryland School of Dentistry Baltimore, MD (1)
Dufour Lab, University of Calgary, department of Physiology and Pharmacology, Biochemistry and Molecular Biology (1)
Functional Genomics, University Medicine Greifswald, Germany (1)
Glycoproteomics Lab, Parasitology department, Institute of Biomedical Sciences of University of São Paulo, Brazil. (1)
Head of the Curie Institute Mass Spectrometry Platform (1)
Immunopathology of Virus Infections Institute of Virology Technical University of Munich Schneckenburgerstr. 8 D-81675 Munich, Germany tel: +49 (0) 89 4140 9270 (1)
Inserm UMR S 938, CRSA, Bât. Kourilsky, 34 Rue Crozatier, 75012 Paris, France. (1)
Institute of Biochemistry II, Faculty of Medicine, Goethe University, Frankfurt am Main, Germany Frankfurt Cancer Institute, Frankfurt am Main, Germany Cardio-Pulmonary Institute, Frankfurt am Main, Germany (1)
Institute of Lung Health and Immunity and Comprehensive Pneumology Center with the CPC-M BioArchive, Helmholtz Zentrum München, Member of the German Center of Lung Research (DZL) - München (Germany) (1)
Institute of Lung Health and Immunity, and Comprehensive Pneumology Center with the CPC-M bioArchive, Ludwig-Maximilians-Universität München and Helmholtz Zentrum München, Munich, Germany, Member of the German Center for Lung Research (DZL). (1)
Institute of Medical Virology, University of Zurich, Zurich, Switerland (1)
Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, College of Life Science and 9 Technology, Jinan University, Guangzhou 510632, China (1)
Lung Repair & Regeneration Department, Boehringer Ingelheim Pharma GmbH & Co. KG (1)
Maastricht University Medical Center Department of Medical Microbiology PO box 5800 6202 AZ Maastricht The Netherlands T +31 43 38 74663 f.stassen@maastrichtuniversity.nl ( lab head ) (1)
Mass Spectrometry Technology Access Center (MTAC), McDonnell Genome Institute, Washington University, St. Louis (1)

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Comparative metabolomics analysis of bronchial epithelium during barrier establishment after allergen exposure

BACKGROUND: Several studies have shown a correlation between an altered metabolome and respiratory allergies. The epithelial barrier hypothesis proposes that an epithelial barrier dysfunction can result in allergic diseases development. Der p 1 allergen from house dust mite is a...

2023-08-22 | MTBLS1755 | MetaboLights

Transcription profiling of human bronchial airway epithelial cells infected with P. aeruginosa, S.aureus or respiratory syncytial virus vs uninfected controls to investigate the role of epithelial cells upon infection of airway pathogens

Bronchial epithelial cells represent the first line of defense against invading airborne pathogens. They are important contributors to innate mucosal immunity and provide a variety of anti-microbial effectors. To investigate the role of epithelial cells upon infection of airway pathogens, we stimula...

ORGANISM(S): Homo sapiens

2007-11-11 | E-GEOD-6802 | biostudies-arrayexpress

Gene expression from bronchial and nasal epithelial cell samples of healthy current and never smokers.

mRNA expression was assayed from bronchial epithelial cells collected via bronchoscopy and nasal epithelial cells collected by brushing the inferior turbinate from healthy current and never smoker volunteers in order to determine the relationship between smoking-related gene expression changes in b...

ORGANISM(S): Homo sapiens

2011-03-14 | E-GEOD-16008 | biostudies-arrayexpress

Transcription profiling of human bronchial epithelial cells treated with vehicle (control), VOSO4 (V, 50 uM) or ZnSO4 (Zn, 50 uM) for 4 hours.

Human bronchial epithelial cells were treated with vehicle (control), VOSO4 (V, 50 uM) or ZnSO4 (Zn, 50 uM) for 4 hours.

ORGANISM(S): Homo sapiens

2007-08-25 | E-GEOD-2111 | biostudies-arrayexpress

Transcription profiling by array of human bronchial epithelial cells stimulated with IL-13

Human bronchial epithelial cells were stimulated without or with 100 ng/mL IL-13 for 24 hours.

ORGANISM(S): Homo sapiens

2012-07-05 | E-MEXP-3353 | biostudies-arrayexpress

Cytosolic proteome of Staphylococcus aureus HG001 post internalization in bronchial epithelial cells - human dataset

The data set consists of 32 cytosolic samples of human bronchial epithelial cells that were collected during infection with S. aureus. The data include 8 (0h, 1h, 2.5 h, 6.5 h, 24 h, 48 h, 72 h, and 96 h post infection) time points that were collected out of four biological replicates. DIA data and ...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

MSV000082923 | MassIVE

The global Proteome and Ubiquitinome of bacterial and viral co-infected Bronchial Epithelial Cells

Viral infections facilitate bacterial trafficking to the lower respiratory tract resulting in bacterial viral co infections. Bacterial dissemination to the lower respiratory tract is enhanced by influenza A virus induced epithelial cell damage and dysregulation of immune responses. Epithelial cells ...

ORGANISM(S): Homo Sapiens Staphylococcus Aureus Influenza A Virus (a/germany-by/74/2009(h1n1)) Streptococcus Pyogenes

2022-06-13 | PXD026625 | panorama

Transcription profiling of human bronchial epithelial cells from normal and asthmatic individuals to investigate rhinovirus-induced modulation of gene expression

Human Rhinovirus (HRV) infection can trigger exacerbations of asthma. Understanding of the mechanisms provoking airway inflammation and remodeling in asthma, as well as the pathogenic mechanisms of HRV infection and its association with asthma exacerbations, may offer significant opportunities for i...

ORGANISM(S): Homo sapiens

2008-11-13 | E-GEOD-13396 | biostudies-arrayexpress

Microvesicles Derived from Human Bronchial Epithelial Cells Regulate Macrophage Activation During Mycobacterium abscessus Infection

Intercellular communication is important for host immunity in response to bacterial infections. Nontuberculous mycobacterium (NTM), such as Mycobacterium abscessus (M.ab), is a group of environmental bacteria that can cause severe lung infections in individuals with pre-existing lung conditions, inc...

ORGANISM(S): Homo sapiens (Human) Mycobacterium abscessus (strain ATCC 19977 / DSM 44196 / CIP 104536 / JCM 13569 / NCTC 13031 / TMC 1543)

2026-03-30 | PXD056025 | Pride

Transcription profiling of human bronchial epithelial cells treated with interferon gamma and/or dexamethasone

RNA from cultured human bronchial epithelial cells treated for 8 hours or for 24 hours with medium alone, interferon gamma, dexamethasone or both interferon gamma and dexamethasone.

ORGANISM(S): Homo sapiens

2007-08-25 | E-GEOD-1815 | biostudies-arrayexpress

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BACKGROUND: Several studies have shown a correlation between an altered metabolome and respiratory allergies. The epithelial barrier hypothesis proposes that an epithelial barrier dysfunction can result in allergic diseases development. Der p 1 allergen from house dust mite is a...

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