Human htert-rpe1

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Genomics (35)
Proteomics (34)
Unknown (29)
Transcriptomics (17)
Metabolomics (3)

Organisms

Burkholderia cenocepacia J2315 (32)
Azoarcus sp. CIB (32)
Wheat dwarf virus - [Taiyuan] (32)
Acesta excavata (32)
Hypsibius exemplaris (32)
Methanobrevibacter smithii (32)
Azospirillum sp. Sp 7 (32)
Nitrosophilus labii (32)
Paramecium bursaria (32)
Listeria monocytogenes (32)
Marsilea mutica (32)
Dendrobium huoshanense (32)
Perna canaliculus (32)
Chlorella vulgaris (32)
Bactrocera dorsalis (32)
Equus asinus (32)
Bifidobacterium longum NCC2705 (32)
Limnospira platensis (32)
Sordaria macrospora (32)
Argyrosomus regius (32)
Acinetobacter baumannii ATCC 17978 (32)
Turnip crinkle virus (32)
Pinctada maxima (32)
Sinorhizobium meliloti 2011 (32)
Drosophila mojavensis sonorensis (32)
Thelohanellus kitauei (32)
Drosophila arizonae (32)
aquatic metagenome (32)
Homo sapiens (28)
Mus musculus (1)

Organisms

Homo sapiens (15)

Repository

pride (32)
ENA (25)
biostudies-arrayexpress (14)
geo (9)
EGA (3)
MetaboLights (3)
PeptideAtlas (2)
ExpressionAtlas (1)

Tissue

Epithelial cell (21)
Cell culture (13)
HTERT-RPE1 cell (7)
Retinal pigment epithelial cell (3)
Others (2)
Permanent cell line cell (2)
Retinal pigment epithelium (1)
Melanocyte (1)

Disease

Disease free (2)
Oculocutaneous albinism type VII (1)
Age related macular degeneration (1)
Esophageal cancer (1)
Cervix carcinoma (1)

Technology Type

Mass Spectrometry (32)
Affinity purification coupled with mass spectrometry proteomics (15)
Data-independent acquisition (5)
Data-dependent acquisition (5)
Shotgun proteomics (5)
Bottom-up proteomics (4)
Mass spectrometry (3)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - hilic (2)
LTQ Orbitrap (2)
NextSeq 2000 (1)
Illumina HiSeq 1500 (1)
Illumina HiSeq 3000 (1)
NextSeq 500 (1)
Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2025 (11)
2023 (11)
2024 (9)
2021 (4)
2016 (4)
2015 (4)
2012 (4)
2020 (4)
2026 (3)
2022 (3)
2014 (2)
2019 (1)
2018 (1)

UNIPROT ID/AC

Q9Y242 (2)
Q9ULD6 (2)
Q9NZL6 (2)
Q9NW07 (2)
Q9NUG4 (2)
Q9H1Z9 (2)
Q9H013 (2)
Q9GZP1 (2)
Q9C0D7 (2)
Q9BVV8 (2)
Q96S65 (2)
Q96LR2 (2)
Q92529 (2)
Q8IV32 (2)
Q86T90 (2)
Q7Z2X4 (2)
Q6MZQ0 (2)
Q6KF10 (2)
Q6IQ55 (2)
Q5FWE3 (2)
Q2NL68 (2)
Q15858 (2)
Q14526 (2)
Q10587 (2)
P58340 (2)
P41161 (2)
P17181 (2)
P0DMB2 (2)
P01583 (2)
O95136 (2)

ENSEMBL ID

ENSG00000170477 (2)
ENSG00000147251 (1)

CHEBI ID

CHEBI:17924 (2)
CHEBI:17750 (2)
CHEBI:16347 (2)
CHEBI:88573 (1)
CHEBI:41539 (1)
CHEBI:28493 (1)
CHEBI:191371 (1)
CHEBI:186280 (1)
CHEBI:88420 (1)
CHEBI:187801 (1)
CHEBI:53508 (1)
CHEBI:176772 (1)
CHEBI:176739 (1)
CHEBI:137128 (1)
CHEBI:77346 (1)
CHEBI:191370 (1)
CHEBI:191369 (1)
CHEBI:191368 (1)
CHEBI:191367 (1)
CHEBI:88388 (1)
CHEBI:89432 (1)
CHEBI:86221 (1)
CHEBI:191366 (1)
CHEBI:191365 (1)
CHEBI:191364 (1)
CHEBI:191363 (1)
CHEBI:137121 (1)
CHEBI:28874 (1)
CHEBI:191361 (1)
CHEBI:89583 (1)

Metabolite Name

D-Sorbitol (2)
PI(18:0/22:4(10Z,13Z,16Z,19Z)) (1)
C24:1 Sulfatide (1)
Decanoyl-CoA (1)
24:0-18:3-PS (1)
PE(22:4(7Z,10Z,13Z,16Z)/22:4(7Z,10Z,13Z,16Z)) (1)
All trans Decaprenyl diphosphate (1)
C22 Sulfatide (1)
Thyroxine sulfate (1)
PE(20:2(11Z,14Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (1)
PC(22:4(7Z,10Z,13Z,16Z)/22:5(4Z,7Z,10Z,13Z,16Z)) (1)
18:0-18:1-PI (1)
6'-Hydroxysiphonaxanthin ester (1)
18:0-18:2-PI (1)
18:0-18:3-PI (1)
18:2-18:2-PI (1)
C20 Sulfatide (1)
24:0-18:2-PS (1)
PI(16:0/20:0) (1)
22:1-18:3-PS (1)
18:1-18:3-PI (1)
1,2-Diacyl-Sn-Glycero-3-Phosphoinositol (1)
16:0-18:2-PI (1)
22:0-18:1-PS (1)
22:0-18:2-PS (1)
22:0-18:3-PS (1)
3-Decaprenyl-4-hydroxybenzoic acid (1)
20:0-18:1-PS (1)
22:1-18:3-PC (1)
22:2-18:3-PC (1)

First Public Date

2024 (6)
2021 (6)
2023 (3)
2026 (2)
2025 (2)
2020 (2)
2014 (2)
2016 (1)
2015 (1)

Modification

4x(15)N labeled L-arginine (1)

Study type

Transcription profiling by array (6)
RNA-seq of coding RNA (3)
Other (1)
ChIP-seq (1)
DNA-seq (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of non coding RNA (1)

Release Date

2021 (9)
2025 (6)
2016 (6)
2015 (4)
2022 (4)
2014 (2)
2012 (2)
2024 (2)
2023 (1)
2020 (1)
2019 (1)
2018 (1)
2017 (1)
2013 (1)
2009 (1)
2007 (1)

Lab affiliation

University of Bristol (8)
Laboratory of Protein Metabolism, Tokyo Metropolitan Institute of Medical Science, Tokyo, Japan (3)
Cambridge Institute for Medical Research, University of Cambridge, UK (2)
Institut de recherches cliniques de Montréal, Center for Genetic and Neurological Diseases,Montréal, QC, Canada Département de biochimie et médecine moléculaire, Université de Montréal, Montréal, QC, Canada Division of Experimental Medicine, McGill University, Montreal, QC, Canada (1)
Department de biochimie et medecine moleculaire, Universite de Montreal (1)
Team Lead in Proteomics Head of the Proteomics Research Translational Technology Platform UCL Cancer Institute, Paul O’Gorman Building 72 Huntley Street, London, WC1E 6DD, UK (1)
SAMRC Gynaecology Cancer Research Centre, University of Cape Town, South Africa (1)
School of Biochemistry, University of Bristol, UK. (1)
Molecular Biology of Retinal Degenerations Institute for Ophthalmic Research Eberhard-Karls University of Tuebingen (1)
Institute for Ophthalmic Research University of Tübingen (1)
Institute for Ophthalmic Research Eberhard-Karls University of Tuebingen Elfriede-Aulhorn-Str. 7 D-72076 Tuebingen. Germany. (1)
Department of Molecular, Cellular & Developmental Biology Yale University (1)
Hubrecht Institute-KNAW & University Medical Center Utrecht, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands. (1)
Molecular Genetics, RPTU Kaiserslautern (1)
Department of Physiology and Cell Biology, University of Arkansas for Medocal Sciences, AR, USA (1)
University of Arkansas for Medical Scineces (1)
School of Biochemistry, Faculty of Life Sciences, University of Bristol (1)
Charité Universitätsmedizin, Department of Biochemistry, 10117 Berlin, Germany The Wellcome Centre for Human Genetics, Nuffield Department of Medicine, University of Oxford, Oxford OX3 7BN, UK Max Planck Institute for Molecular Genetics, Berlin, Germany (1)
Université de Montréal (1)
Department of Cell Biology, Harvard Medical School (1)
Baxter Laboratory for Stem Cell Biology Department of Microbiology & Immunology Stanford University School of Medicine (1)
Head of Proteomics (1)

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human hTERT-RPE1 cell spheroid : Control siRNA transfected vs. YAP1 siRNA transfected

Transcriptional profiling of human hTERT-RPE1 cell spheroids comparing Control siRNA transfected hTERT-RPE1 cell spheroids with those transfected with YAP1 siRNA. Two-condition experiment, Control siRNA vs.YAP1 siRNA hTERT-RPE1 cell spheroids. Biological replicates: 1 Control siRNA, 1YAP1 siRNA tran...

ORGANISM(S): Homo sapiens

2015-02-01 | E-GEOD-54146 | biostudies-arrayexpress

RNA-seq in human RPE1-hTERT cells

PRJNA609332 | ENA

RNA-seq of human hTERT-RPE1 and RPE1-MYCN-ER cells with treatment of EtOH (0h) or tamoxifen for 24h, 48h and 72h to activate MYCN

RNA-seq upon MYCN activation in the hTERT-immortalized MYCN retinal pigmented epithelial cell line (RPE1–MYCN-ER). The parental hTERT-immortalized retinal pigment epithelium (hTERT-RPE1) was used as a control as this cell line does not carry the MYCN:ER expression construct. Both cell lines were tre...

ORGANISM(S): Homo sapiens

2021-06-03 | E-MTAB-9667 | biostudies-arrayexpress

McGill EMC Community projects Release 7 for cell line "hTERT RPE1" - samples

Complete reference epigenome (as defined by IHEC) of normal hTERT RPE1 cell line as well as hTERT RPE1 cell lines engineered to express EPC1-PHF1 and JAZF1-SUZ12 fusion proteins, found in Endometrial Stromal Sarcoma.

EGAD00001007680 | EGA

Single-cell replication timing analysis of hTERT-RPE1 cells depleted for SAF-A protein

The impact of depleting SAF-A (HNRNPU) on the genome-wide replication timing program in human hTERT-RPE1 cells was assessed by a single-cell replication timing analysis.

ORGANISM(S): Homo sapiens

2021-12-15 | E-MTAB-10234 | biostudies-arrayexpress

p53-dependent transcription in hTERT-RPE1 cells

PRJNA953085 | ENA

human hTERT-RPE1 cell spheroid : Control siRNA transfected vs. YAP1 siRNA transfected

Transcriptional profiling of human hTERT-RPE1 cell spheroids comparing Control siRNA transfected hTERT-RPE1 cell spheroids with those transfected with YAP1 siRNA.

ORGANISM(S): Homo sapiens

2015-02-01 | GSE54146 | GEO

RNA-seq in human RPE1-hTERT cells

Gene expression was profiled in unperturbed RPE1-hTERT cells by RNA-seq.

ORGANISM(S): Homo sapiens

2020-02-29 | GSE146121 | GEO

ChIP-seq of old and new H3.3 in RPE1-hTERT cells

PRJNA609333 | ENA

Gene expression in hTERT-RPE1 cells with overexpression of MFRP

Gene expression was compared between hTERT-RPE1 cells and hTERT-RPE1 cells stably overexpressing mouse MFRP with an N-terminal GFP fusion. RNA was prepared from hTERT-RPE1 cells overexpressing GFP-MFRP and control cells. Both conditions were done in triplicate. Affymetrix GeneChip Human Genome U13...

ORGANISM(S): Homo sapiens

2014-03-01 | E-GEOD-44540 | biostudies-arrayexpress

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118 Results

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