Human proteome project

Show results for

Proteomics (2409)
Unknown (313)
Other (88)
Multiomics (87)
Transcriptomics (20)
Genomics (12)
Metabolomics (8)
Clinical (1)

Organisms

Schizosaccharomyces pombe (1576)
Oryza sativa Indica Group (1576)
Sinorhizobium meliloti BL225C (1576)
Sus scrofa domesticus (1576)
Saccharomyces cerevisiae (1576)
Staphylococcus aureus (1576)
Rattus norvegicus (1576)
Escherichia coli (1576)
Entamoeba histolytica (1576)
Physcomitrium patens (1576)
Methylohalobius crimeensis 10Ki (1576)
Homo sapiens (1576)
Shigella flexneri (1576)
Homo sapiens (653)
Mus musculus (36)
Fusarium sinicum (31)
Mus musculus (24)
Halobacterium salinarum NRC-1 (11)
Caenorhabditis elegans (2)
Saccharomyces cerevisiae (2)
BTO:0000214 (2)
Carassius auratus (1)
Strongyloides ratti (1)
Anopheles stephensi (1)
Streptomyces lividans (1)
Salmo salar (1)
108887 (1)
Drosophila melanogaster (1)
Cryptococcus neoformans (1)
Chironex fleckeri (1)

Organisms

Homo sapiens (3)
Mus musculus (2)

Repository

pride (1576)
jPOST (524)
PeptideAtlas (162)
MassIVE (95)
GPMDB (83)
PAXDB (31)
biostudies-arrayexpress (21)
iProX (20)
ENA (10)
MetaboLights (8)
geo (2)
LINCS (2)
PanoramaPublic (2)
EGA (1)

Tissue

Cell culture (408)
Epithelial cell (111)
Blood (104)
Blood plasma (90)
Brain (89)
Permanent cell line cell (82)
Liver (61)
Others (57)
Lung (48)
B cell (47)
Fibroblast (42)
Hepatocyte (40)
Heart (39)
Blood cell (39)
Plasma Non-glyco (24)
Digestive System (11)
Female Reproductive System (10)
Heart (6)
Large Intestine (6)
Brain (6)
Male Reproductive System (6)
Liver (6)
Lung (3)
Adrenal Gland (3)
Eye (3)
Kidney (3)
Urinary Bladder (2)
Pancreas (2)
Ovary (2)
Breast (1)

Disease

Disease free (111)
Not Available (83)
Breast cancer (55)
Colon cancer (46)
Acute leukemia (24)
Cardiovascular system disease (22)
Alzheimer's disease (21)
Cervix carcinoma (18)
Prostate adenocarcinoma (14)
Lung cancer (14)
Malignant neoplasm of ovary (12)
Brain cancer (11)
Brain glioblastoma multiforme (10)
Lymphoma (10)
Influenza (10)
Hepatocellular carcinoma (9)
Non-small cell lung carcinoma (9)
Melanoma (9)
Type 2 diabetes mellitus (9)
Liver cancer (8)
Multiple myeloma (7)
Chronic myeloid leukemia (7)
Rheumatoid arthritis (7)
Wounds and Injuries (7)
Lung adenocarcinoma (6)
Pancreatic ductal adenocarcinoma (6)
Parkinson's disease (6)
Colorectal Carcinoma (5)
Serous Cystadenocarcinoma (2)
Malignant neoplasm of colon (1)

Technology Type

Mass Spectrometry (1576)
Shotgun proteomics (769)
Bottom-up proteomics (287)
Affinity purification coupled with mass spectrometry proteomics (156)
Data-dependent acquisition (142)
Top-down proteomics (139)
Gel-based experiment (116)
Data-independent acquisition (101)
SWATH MS (76)
SRM/MRM (39)
Chemical cross-linking coupled with mass spectrometry proteomics (16)
All-ion fragmentation (15)
MSE (12)
Immunopeptidomics (10)
Mass spectrometry imaging (7)
Mass spectrometry (6)
Affinity proteomics (6)
HDMSE (6)
DiaPASEF (5)
Metaproteomics (3)
Proteogenomics (3)
Mass spectrometry (2)
RNA mass spectrometry (2)
NMR spectroscopy (1)
Mass spectrometry assay (1)
PAcIFIC (1)

Instrument Platform

LTQ Orbitrap Velos (95)
Instrument (83)
LTQ Orbitrap Elite (52)
TripleTOF 5600 (23)
Q Exactive (19)
LTQ Orbitrap (16)
Orbitrap Fusion Lumos (13)
Q Exactive HF (8)
LTQ Orbitrap XL (8)
Orbitrap Fusion (6)
MS:1000031 (4)
MS:1000419 (3)
MS:1000044 (3)
Impact (3)
TimsTOF Pro (3)
Q Exactive Plus (3)
Q Exactive HF-X (3)
LTQ FT (3)
MaXis 4G (2)
Orbitrap Fusion ETD (2)
Synapt G2-S HDMS (2)
TripleTOF 6600 (2)
Orbitrap Exploris 480 (2)
Illumina HiSeq 2500 (1)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 2000 (1)
Illumina HiSeq 4000 (1)
Q Exactive HF-X (Thermo Scientific instrument model) (1)
6550 iFunnel Q-TOF LC/MS (Agilent instrument model) (1)
QSTAR Elite (1)

Publication Date

2024 (631)
2022 (238)
2023 (227)
2025 (226)
2026 (183)
2021 (164)
2019 (156)
2020 (140)
2014 (122)
2018 (74)
2016 (71)
2015 (63)
2017 (56)
2013 (39)
2006 (15)
2011 (11)
2010 (3)
2009 (2)
2007 (2)
2005 (2)
2008 (1)

UNIPROT ID/AC

TBA1B_HUMAN (31)
A0A096LPE2_HUMAN (31)
S10A8_HUMAN (31)
ALBU_HUMAN (31)
ANGT_HUMAN (31)
AACT_HUMAN (31)
VASN_HUMAN (31)
HBD_HUMAN (31)
HEP2_HUMAN (31)
PIGR_HUMAN (31)
DOPO_HUMAN (31)
CERU_HUMAN (31)
CBPN_HUMAN (31)
ITIH3_HUMAN (31)
VTNC_HUMAN (31)
CO8A_HUMAN (31)
HGFA_HUMAN (31)
LYSC_HUMAN (31)
PLMN_HUMAN (31)
FKB15_HUMAN (31)
C1QC_HUMAN (31)
FINC_HUMAN (31)
HPTR_HUMAN (31)
COMP_HUMAN (31)
CYTC_HUMAN (31)
AT1A1_HUMAN (31)
TPIS_HUMAN (31)
G3P_HUMAN (31)
IC1_HUMAN (31)
K1C10_HUMAN (31)

ENSEMBL ID

ENSG00000170477 (144)
ENSG00000229353 (63)
ENSG00000147251 (55)
ENSG00000247315 (44)
ENSG00000204131 (16)
ENSG00000214897 (3)
ENSG00000176092 (2)

CHEBI ID

CHEBI:64446 (3)
CHEBI:64520 (3)
CHEBI:64516 (3)
CHEBI:65303 (3)
CHEBI:74473 (2)
CHEBI:166932 (2)
CHEBI:137655 (2)
CHEBI:85737 (2)
CHEBI:134428 (2)
CHEBI:134451 (2)
CHEBI:66855 (2)
CHEBI:65302 (2)
CHEBI:134270 (2)
CHEBI:71712 (2)
CHEBI:85739 (2)
CHEBI:71722 (2)
CHEBI:141588 (2)
CHEBI:67058 (2)
CHEBI:67064 (2)
CHEBI:64424 (2)
CHEBI:85742 (2)
CHEBI:84659 (2)
CHEBI:85743 (2)
CHEBI:85736 (2)
CHEBI:84662 (2)
CHEBI:84665 (2)
CHEBI:85741 (2)
CHEBI:85738 (2)
CHEBI:85732 (2)
CHEBI:85727 (2)

Metabolite Name

Leucine (3)
Pyruvic acid (2)
2-Hydroxy-3-methylbutyric acid (2)
Glycolic acid (2)
Valine (2)
Deoxyuridine (2)
Kynurenic acid (2)
Succinic acid (2)
Pantothenic acid (2)
Prostaglandin E1 (2)
Xanthosine (2)
Cholic acid (2)
Citric acid (2)
2-Hydroxycaproic acid (2)
3-Hydroxybutyric acid (2)
Traumatic acid (2)
Glyceric acid (2)
Malic acid (2)
Tyrosine (2)
Alanine (2)
Phenylalanine (2)
Glutamine (2)
Uric acid (2)
Cytidine (2)
Xanthine (2)
Thymidine (2)
Uridine (2)
Creatinine (2)
Creatine (2)
Tryptophan (2)

First Public Date

2025 (3)
2026 (1)
2022 (1)
2021 (1)
2019 (1)
2018 (1)
2017 (1)
2014 (1)

Modification

Not available (9)
4-tetrahydrothiazine-3-carboxylic acid (6)
4x(15)N labeled L-arginine (5)
15.994915 (3)
2x(15)N labeled L-lysine (3)
4x(2)H labeled dimethylated residue (2)
N6-dimethyl-L-lysine (2)
57.021464 (2)
32.056407 (1)
45.029395 (1)
0.984016 (1)
4'-dihydroxyphenylalanine (1)
-17.026549 (1)
42.010565 (1)
4x(2)H labeled dimethylated L-lysine (1)
+3amu) (1)

Study status

Recruiting (1)

Study type

Transcription profiling by array (11)
RNA-seq of coding RNA (4)
Human - One-color microarray (1)
Proteomic profiling by mass spectrometer (1)
Antigen profiling (1)
Other (1)
DNA-seq (1)
RNA-seq of coding RNA from single cells (1)
Observational (1)

Release Date

2024 (41)
2023 (37)
2025 (34)
2020 (31)
2022 (29)
2021 (28)
2016 (19)
2019 (18)
2017 (16)
2014 (15)
2018 (13)
2015 (13)
2013 (12)
2011 (6)
2010 (5)
2026 (4)
2012 (3)
2008 (2)
2003 (2)
2009 (1)
2007 (1)
2006 (1)
2005 (1)
2004 (1)

Lab affiliation

Departments of Chemical and Biological Engineering, Chemistry, and Molecular Biosciences, the Chemistry of Life Processes Institute, and the Proteomics Center of Excellence, Northwestern University, Evanston, Illinois 60208, United States (60)
University of Oxford (12)
Bioplatforms Australia (8)
HUPO Plasma Proteome Project (5)
Kyungpook national university (5)
Proteomics - Bioinformatics (5)
Department of Biology, University of Fribourg Chemin du Musée 10, 1700 Fribourg, Switzerland T +41 26 300 8631 (5)
Pacific Northwest National Laboratory (5)
European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK (4)
Medizinisches Proteom-Center, Ruhr-Universität Bochum, Bochum, Germany (4)
BBE, Caltech (4)
Department of Convergence Medicine, Convergence Medicine Research Center/Biomedical Research Center, Asan Medical Center, Asan Institute for Life Sciences, University of Ulsan College of Medicine, 88 Olympic-ro 43-gil, Songpa-gu, Seoul 05505, Republic of Korea. (4)
Professor and Director Center of Proteomic Analysis BGI-Shenzhen (4)
University of Oxford University of Dundee (4)
Utrecht University (4)
State Key Laboratory of Proteomics, Beijing Proteome Research Center, National Center for Protein Sciences (Beijing), Beijing Institute of Lifeomics, Beijing, China (4)
Analytics Core Facility Essen (ACE), Chemische Biologie, Universität Duisburg-Essen, ZMB, Germany (4)
Center for Integrative Genomics, University of Lausanne, Lausanne, Switzerland (3)
Federal University of Uberlandia (3)
Functional proteomics group; Molecular Biomedicine department; CIB-CSIC (3)
HKU (3)
The University of Chicago (3)
Sequence database group (3)
BBE, Tsui-Fen Chou's lab, Caltech, USA (3)
University of Arizona, Department of Entomology (3)
Department of Structural Biology and Developmental Neurobiology, Center for Proteomics and Metabolomics, St. Jude Children's Research Hospital, Memphis, TN 38105, USA (3)
Beijing proteome research center (3)
Novo Nordisk Foundation, Center for Protein Research Faculty of Health and Medical Sciences University of Copenhagen Blegdamsvej 3B, DK-2200 Copenhagen N Denmark (3)
Donnelly Centre for Cellular and Biomolecular Research, Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada (3)
Baker Heart & Diabetes Inst. (3)

Location

Germany (1)

Tags

xref:ArrayExpress:E-ERAD-151 (1)
xref:PubMed:30983154 (1)
xref:PubMed:41667485 (1)
xref:PubMed:34771433 (1)
xref:PubMed:39820339 (1)

Previous page
1 / 286
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 286
Next page

Sort by:

Relevance

Page size

Multi-omic profiles of human nonalcoholic fatty liver disease tissue highlight heterogenic phenotypes

Non-alcoholic fatty liver disease (NAFLD) is a consequence of sedentary life style and high fat diets with an estimated prevalence of about 30% in western countries. It is associated with insulin resistance, obesity, glucose intolerance and drug toxicity. Additionally, polymorphisms in, e.g. APOC3, ...

2015-12-07 | MTBLS174 | MetaboLights

Proteomics of human naive pluripotent and trophoblastic stem cells

This project aims at identifying missing proteins in naive pluripotent and trophoblastic stem cells in the framework of the human proteome project (HPP). To date, as much as 1343 missing proteins remain to be credibly identified essentially, but not entirely, by mass spectrometry. The present result...

ORGANISM(S): Homo sapiens (Human)

2023-03-11 | PXD035768 | Pride

Reanalysis of Pandey lab's draft of the human proteome

The availability of human genome sequence has transformed biomedical research over the past decade. However, an equivalent map for the human proteome with direct measurements of proteins and peptides was lacking. To this end, Akhilesh Pandey's lab reported a draft map of the human proteome based on...

ORGANISM(S): Homo sapiens

2015-03-10 | E-PROT-1 | biostudies-arrayexpress

Progress Identifying and Analyzing the Human Proteome: 2021 Metrics from the HUPO Human Proteome Project.

Not available

S-EPMC9340669 | biostudies-literature

Human Proteome Project Mass Spectrometry Data Interpretation Guidelines 2.1.

Not available

S-EPMC5096969 | biostudies-literature

The 2024 Report on the Human Proteome from the HUPO Human Proteome Project.

Not available

S-EPMC11781352 | biostudies-literature

The 2022 Report on the Human Proteome from the HUPO Human Proteome Project.