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TranscriptomicsNSun2-mediated cytosine-5 methylation in Vault non-coding RNA determines its processing into small RNAs
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Homo sapiens 
2013-07-23 | E-GEOD-44386 | biostudies-arrayexpress
TranscriptomicsNSun2-mediated cytosine-5 methylation in Vault non-coding RNA determines its processing into small RNAs [iCLIP]
Autosomal-recessive loss of the NSUN2 gene has been recently identified as a causative link to intellectual disability disorders in humans. NSun2 is an RNA methyltransferase modifying cytosine-5 in transfer RNAs (tRNA). Whether NSun2 methylates additional RNA species is currently debated. Here, we a...
ORGANISM(S): Homo sapiens 
2013-07-23 | E-GEOD-44385 | biostudies-arrayexpress
TranscriptomicsNSun2-mediated cytosine-5 methylation in Vault non-coding RNA determines its processing into small RNAs [RNA-seq]
Autosomal-recessive loss of the NSUN2 gene has been recently identified as a causative link to intellectual disability disorders in humans. NSun2 is an RNA methyltransferase modifying cytosine-5 in transfer RNAs (tRNA). Whether NSun2 methylates additional RNA species is currently debated. Here, we a...
ORGANISM(S): Homo sapiens 
2013-07-23 | E-GEOD-44384 | biostudies-arrayexpress
TranscriptomicsRNA-seq of one human cortex sample and one sample from the HAP1 cell line, used to illustrate the development and application of the JCC score
Two RNA-seq libraries were used as example data to illustrate the development and application of the junction coverage compatibility (JCC) score. They represent different experimental systems and were sequenced on different hardware on different occasions, which was desirable in order to illustrate ...
ORGANISM(S): Homo sapiens 
2018-08-06 | E-MTAB-7089 | biostudies-arrayexpress
TranscriptomicsTranscriptional profiling in skin of K14Sin3KO mice
Expression analysis of K14Sin3afl/flCreER,K14Mycfl/flCreER and K14Sin3aMycfl/flCreER effects on gene expression in adult mouse skin. We used a conditional knock out strategy to delete Sin3a and/or c-Myc specifically in adult mouse K14 positive keratinocytes and analysed the resulting changes in gene...
ORGANISM(S): Mus musculus 
2011-10-26 | E-MTAB-554 | biostudies-arrayexpress
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