Immunodeficiency

Show results for

Unknown (15392)
Transcriptomics (5596)
Genomics (1569)
Proteomics (387)
Other (62)
Metabolomics (34)
Genomic (31)
Methylation profiling (23)
Models (15)
Clinical (10)
Multiomics (5)

Organisms

Homo sapiens (3221)
Mus musculus (1639)
Rattus norvegicus (351)
Macaca mulatta (107)
Arabidopsis thaliana (104)
Saccharomyces cerevisiae (95)
Drosophila melanogaster (81)
Sus scrofa (57)
Bos taurus (56)
Danio rerio (50)
Mycobacterium tuberculosis (47)
Gallus gallus (43)
Caenorhabditis elegans (32)
Mycobacterium tuberculosis H37Rv (25)
Escherichia coli (22)
Oryza sativa (21)
Ovis aries (21)
Zea mays (19)
Schizosaccharomyces pombe (18)
Streptococcus pneumoniae D39 (16)
Canis lupus familiaris (16)
Staphylococcus aureus (16)
Oryza sativa Japonica Group (14)
Streptomyces coelicolor (13)
Oncorhynchus mykiss (12)
Medicago truncatula (9)
Campylobacter jejuni (9)
Hordeum vulgare (9)
Glycine max (9)
Equus caballus (8)

Organisms

Homo sapiens (329)
Human immunodeficiency virus 1 (170)
Mus musculus (119)
Macaca mulatta (53)
Human immunodeficiency virus (15)
Simian immunodeficiency virus (11)
Sus scrofa (8)
Chlorocebus pygerythrus (4)
Macaca fascicularis (4)
Macaca nemestrina (3)
Chlorocebus sabaeus (3)
Danio rerio (3)
Cercocebus atys (2)
Simian-Human immunodeficiency virus (2)
Aspergillus fumigatus (2)
Equus caballus (2)
human metagenome (2)
human gut metagenome (2)
synthetic construct (2)
Leptospira santarosai str. UW (1)
Aspergillus fumigatus var. fumigatus (1)
Euphorbia fischeriana (1)
Feline immunodeficiency virus (1)
Pneumocystis sp. 'macacae' (1)
Lactiplantibacillus plantarum WCFS1 (1)
Borrelia miyamotoi (1)
Carassius gibelio (1)
Talaromyces marneffei (1)
Mycobacterium shigaense (1)
Talaromyces marneffei ATCC 18224 (1)

Repository

biostudies-arrayexpress (5418)
ENA (998)
geo (750)
MassIVE (164)
EGA (116)
pride (110)
MetaboLights (34)
dbGaP (31)
PeptideAtlas (26)
jPOST (24)
iProX (11)
BioModels (10)
PanoramaPublic (9)
EVA (5)
PAXDB (4)
FAIRDOMHub (3)
ExpressionAtlas (2)
Cell Collective (2)
GPMDB (2)
LINCS (1)

Tissue

Cell culture (24)
T cell (22)
Blood (14)
Others (13)
Blood plasma (9)
Macrophage (8)
Cell suspension culture (7)
Blood cell (6)
B cell (5)
Permanent cell line cell (4)
Embryonic stem cell (3)
Semen (3)
Bone marrow (3)
Neuron (3)
Blood serum (3)
Epithelial cell (3)
Neutrophil (3)
T-lymphocyte (2)
Breast cancer cell (2)
Microglial cell (2)
Epithelial cell of cervix (2)
Blood platelet (2)
JURKAT cell (2)
Extracellular vesicle (2)
Urine (2)
Leukocyte (2)
Brain (2)
Lung (2)
Monocyte (2)
IgG short lived plasma cell (1)

Disease

Normal (15)
Breast cancer (5)
Human immunodeficiency virus infectious disease (3)
HIV (2)
Prostate carcinoma (2)
Neuroblastoma (2)
X-linked agammaglobulinemia (1)
Common variable immunodeficiency (1)
Tumor bearing (1)
Testicular seminoma (1)
Aviremic HIV (1)
CLL (1)
Arrhythmias and right ventricular dysfunction (1)
GIP-dependent Cushing's syndrome (1)
Injured (1)
HPV positive (1)
HIV encephalitis (1)
Osteosarcoma subtype fibroblastic (1)
HIV-1 and Neisseria gonorrhoeae infected (1)
High grade glioblastoma (1)
Cocaine addiction (1)
Ewing family tumor (1)
HIV-1 seropositive (1)
HIV-associated dementia (1)
Acute HIV-1 infection (1)
Primary effusion lymphoma (PEL) (1)
DNA damage (1)
Psoriasis vulgaris (1)
Non-small cell lung cancer xenograft tumor (1)
Uninfected (1)

Technology Type

Mass Spectrometry (110)
Shotgun proteomics (56)
Mass spectrometry (25)
Bottom-up proteomics (18)
Data-dependent acquisition (12)
Gel-based experiment (8)
Affinity purification coupled with mass spectrometry proteomics (8)
SWATH MS (6)
Data-independent acquisition (6)
Top-down proteomics (6)
Mass spectrometry assay (5)
Chemical cross-linking coupled with mass spectrometry proteomics (5)
Illumina HiSeq 2000 (4)
SRM/MRM (3)
Illumina (2)
NMR spectroscopy assay (2)
NMR spectroscopy (2)
MSE (2)
Human Cardio Metabochip (1)
HiSeq X Ten, Illumina HiSeq 2000, Illumina MiSeq, ILLUMINA, Illumina HiSeq 2500 (1)
Illumina HiSeq 2500 (1)
Illumina Genome Analyzer II (1)
Fluorescence intensity (1)
Fluorescence imaging (1)
Olink affinity proteomics (1)
Mass spectrometry imaging (1)
Affinity proteomics (1)
Immunopeptidomics (1)
All-ion fragmentation (1)
DiaPASEF (1)

Instrument Platform

Illumina NovaSeq 6000 (65)
NextSeq 500 (55)
Illumina HiSeq 2500 (40)
Illumina HiSeq 2000 (37)
Illumina HiSeq 4000 (23)
Illumina MiSeq (21)
Illumina NovaSeq X (8)
Illumina Genome Analyzer II (7)
AB SOLiD 4 System (4)
Illumina Genome Analyzer IIx (4)
Illumina HiSeq 3000 (4)
PromethION (3)
NextSeq 2000 (3)
DNBSEQ-T7 (3)
Illumina HiSeq 1500 (3)
NextSeq 550 (3)
None (2)
Illumina HiSeq (2)
Sequel (2)
Agilent 2100 Bioanalyzer (2)
GeneChip Scanner 3000 7G (2)
ScanArray [PerkinElmer] (2)
Bioanalyser (2)
ScanArray Express HT [PerkinElmer] (2)
Scanning hardware (2)
Illumina MiniSeq (2)
BGISEQ-500 (2)
HiSeq X Ten (2)
NanoString nCounter (1)
HPC cluster Lobo (1)

Publication Date

2015 (878)
2010 (818)
2013 (762)
2014 (701)
2012 (646)
2011 (605)
2016 (343)
2008 (289)
2009 (234)
2021 (141)
2025 (130)
2007 (128)
2022 (127)
2023 (116)
2024 (113)
2020 (102)
2026 (86)
2019 (85)
2018 (79)
2017 (75)
2005 (36)
2006 (32)
2004 (17)
2003 (6)
2002 (2)

UNIPROT ID/AC

E0CYZ8_MOUSE (3)
TCL1A_MOUSE (3)
A14EL_MOUSE (3)
TSX_MOUSE (3)
ATG12_MOUSE (3)
RPAB2_MOUSE (3)
DPPA4_MOUSE (3)
S1PBP_MOUSE (3)
ZN287_MOUSE (3)
RPP25_MOUSE (3)
TCAL8_MOUSE (3)
DPA5A_MOUSE (3)
F10C1_MOUSE (3)
SKA2_MOUSE (3)
TYDP2_MOUSE (3)
RBIS_MOUSE (3)
SPC25_MOUSE (3)
GON7_MOUSE (3)
PALM3_MOUSE (3)
CBPC3_MOUSE (3)
BICRL_MOUSE (3)
MTF1_MOUSE (3)
RTEL1_MOUSE (3)
AEBP2_MOUSE (3)
CB076_MOUSE (3)
RN138_MOUSE (3)
AF10_MOUSE (3)
PCGF5_MOUSE (3)
GEMI_MOUSE (3)
RNF12_MOUSE (3)

ENSEMBL ID

ENSG00000170477 (8)
ENSG00000147251 (3)
ENSG00000247315 (2)

CHEBI ID

CHEBI:15428 (10)
CHEBI:16737 (10)
CHEBI:15891 (9)
CHEBI:18012 (9)
CHEBI:16919 (9)
CHEBI:15741 (8)
CHEBI:17268 (8)
CHEBI:17154 (8)
CHEBI:17596 (8)
CHEBI:30769 (8)
CHEBI:33508 (7)
CHEBI:24898 (7)
CHEBI:25017 (7)
CHEBI:17754 (7)
CHEBI:16335 (7)
CHEBI:27266 (7)
CHEBI:7916 (7)
CHEBI:18211 (7)
CHEBI:78320 (7)
CHEBI:30915 (7)
CHEBI:15354 (7)
CHEBI:17368 (7)
CHEBI:17992 (6)
CHEBI:17822 (6)
CHEBI:26271 (6)
CHEBI:18132 (6)
CHEBI:25094 (6)
CHEBI:16344 (6)
CHEBI:18237 (6)
CHEBI:22660 (6)

Metabolite Name

Taurine (8)
Uracil (7)
Creatinine (7)
ADP (6)
Choline (6)
Adenine (6)
Xanthine (6)
Creatine (6)
L-Tyrosine (6)
Inosine (6)
AMP (5)
Citrulline (5)
L-Proline (5)
L-Threonine (5)
Xanthosine (5)
Taurocholic acid (5)
Adenosine (5)
L-Tryptophan (5)
Myristic acid (5)
Uridine (5)
Pseudouridine (5)
Sucrose (5)
L-Methionine (5)
L-Phenylalanine (5)
Hypoxanthine (5)
1-Kestose (4)
3-Methylindole (4)
S-Adenosylmethionine (4)
Glycine (4)
Proline (4)

First Public Date

2024 (118)
2025 (106)
2020 (101)
2014 (93)
2021 (83)
2022 (82)
2023 (81)
2026 (79)
2017 (47)
2019 (46)
2016 (44)
2015 (44)
2018 (37)
2013 (31)
2012 (3)
2011 (3)

Modelling Approach

Ordinary differential equation model (8)
Computational model (2)

Study status

Recruiting (4)
Completed (4)
No longer available (1)
Terminated (1)

Lab affiliation

Key Laboratory for Experimental Teratology of the Ministry of Education, Advanced Medical Research Institute, Qilu Hospital, Cheeloo College of Medicine, Shandong University (2)
Lung and Vascular Inflammation Section, Laboratory of Allergic Diseases, NIAID/NIH Bethesda, MD 20892, USA (2)
Department of Clinical and Molecular Medicine, Norwegian University of Science and Technology, NTNU, Trondheim, Norway Proteomics and Modomics Experimental Core Facility (PROMEC) at Norwegian University of Science and Technology, Trondheim, Norway (2)
University of California San Francisco (2)
PI The Wistar Institute, Philadelphia, PA, USA; (1)
Goethe University Frankfurt, University Hospital, Clinic of Neurology, Exp. Neurology, Heinrich Hoffmann Str. 7, 60590 Frankfurt am Main, Germany (1)
Nuffield Department of Medicine, University of Oxford, Oxford, UK (1)
Bioanalytics, Institute of Biotechnology, Technische Universität Berlin, 13355 Berlin, Germany; Wellcome Centre for Cell Biology, University of Edinburgh, Edinburgh EH9 3BF, UK (1)
Nathalie Arhel Team leader "Viral Trafficking, Restriction & Innate Signaling (VTRIS) Centre d'études d'agents Pathogènes et Biotechnologies pour la Santé (CPBS) CNRS FRE3689 - Montpellier University 1919 route de Mende, 34293 Montpellier cedex 5, France Room 173 / Phone: +33 (0)4 34 35 94 53 / Fax: +33 (0)4 34 35 94 11 Lab web page: http://www.cpbs.cnrs.fr/ Laboratory of Excellence EpigenMed: http://www.epigenmed.fr/ (1)
Department of Microbiology; Icahn School of Medicine at Mount Sinai; New York, NY, 10029; USA (1)
University of Puerto Rico, Medical Sciences Campus, Microbioly and Zoology Department, Translational Proteomics Center (1)
PD Dr. Oliver Schilling Heisenberg Fellow Institute of Molecular Medicine and Cell Research University of Freiburg Stefan-Meier-Str. 17, Room 02 027 D-79104 Freiburg, Germany +49 761 203 9615 oliver.schilling@mol-med.uni-freiburg.de (1)
Rudolf-Virchow-Zentrum Center for Integrative and Translational Bioimaging Universität Würzburg (1)
1Department of Pathology, Johns Hopkins University, Baltimore, Maryland 21287, USA (1)
Department of Pathology, Johns Hopkins University, Baltimore, Maryland 21287 (1)
Department of Medicine, University of Cambridge, Cambridge Biomedical Campus, Cambridge, CB2 0XY, UK (1)
IPHC-LSMBO (1)
Gladstone Institure for Immunology; The J David Gladstone Institutes; San Francisco, CA, USA (1)
Technische Universitat Berlin (1)
Meharry Medical College (1)
Department of Biological Chemistry, Alexander Silverman Institute of Life Sciences, The Edmond J. Safra Campus, The Hebrew University of Jerusalem, Jerusalem, 9190401, Israel. (1)
Massachusetts Institute of Technology, Department of Biological Engineering, David H Koch Institute for Integrative Cancer Research (1)
Centre for Virus Research, University of Glasgow (1)
Associate Professor Systems Virology Department of Translation medicine Faculty of Medicine Lund University Sweden (1)
Center for Integrative Genomics, University of Lausanne, Switzerland (1)
University of Puerto RIco, Medical Sciences Campus, Translational Proteomics Center (1)
Sanquin Research, Department of Molecular and Cellular Hemostasis and Utrecht University (1)
Nuffield Department Medicine, University of Oxford, Oxford, OX3 7BN, United Kingdom. (1)
University Children's Research@Kinder-UKE, University Medical Center Hamburg-Eppendorf, Hamburg, Germany. (1)
1Department of Microbiology, Immunology and Molecular Genetics, University of California, Los Angeles, Los Angeles, CA, USA 2Institute for Quantitative and Computational Biosciences, University of California, Los Angeles, Los Angeles, CA, USA 3Molecular Biology Institute, University of California, Los Angeles, Los Angeles, CA, USA (1)

Keyword

Omenn Syndrome (2)
Bare Lymphocyte Syndrome (BLS) (2)
Combined Immune Deficiency (CID) syndromes (2)
Wiskott-Aldrich Syndrome (2)
Leukocyte adhesion deficiency (2)
Chronic granulomatous disease (CGD) (2)
IPEX syndrome (2)
Autoimmune Lymphoproliferative Syndrome (ALPS) (2)
Hemophagocytic Lymphohistiocytosis (HLH) syndromes (2)
Lymphocyte Signaling defects (2)
Congenital Amegakaryocytic Thrombocytopenia (CAMT) (2)
Osteopetrosis (2)
Hurler syndrome (MPS I) (2)
Metachromatic leukodystrophy (MLD) (2)
X-linked adrenoleukodystrophy (ALD) (2)
Gaucher Disease (2)
Thalassemia major (2)
Sickle cell disease (SCD) (2)
Diamond Blackfan Anemia (DBA) (2)
Inflammatory Bowel Disease (2)
Fludarabine (2)
Pfizer SARS-CoV-2 Vaccine BNT162b2, Moderna SARS-CoV-2 Vaccine, Novavax COVID-19 Vaccine NVX-CoV2373 (1)
Chediak - Higashi Syndrome (1)
Severe Combined Immune Deficiency (SCID) (1)
Combined Variable Immune Deficiency (CVID) syndrome (1)
Dyskeratosis Congenita (DC) (1)
Mucopolysaccharidoses (1)
Hunter syndrome (MPS II) (1)
Alpha mannosidosis (1)
Hematopoietic Stem Cell Transplant (HSCT) (1)

IsPrivate

False (10)

Model Flag

Non Miriam (1)

Submitter Keywords

Ersilia (2)
FAIR-AIML (2)
Machine Learning Model (2)
Immuno-oncology (1)

Classification

viruses (200)
bacteria (7)
fungi (5)

Modification

Not available (1)

Study type

Transcription profiling by array (3760)
RNA-seq of coding RNA (613)
Unknown experiment type (167)
ChIP-seq (120)
RNA-seq of non coding RNA (98)
Comparative genomic hybridization by array (93)
Other (81)
Methylation profiling by array (76)
ChIP-chip by tiling array (60)
RNA-seq of coding RNA from single cells (40)
Transcription profiling by RT-PCR (37)
Transcription profiling by SAGE (36)
Proteomic profiling by array (27)
Transcription profiling by tiling array (25)
Genotyping by array (20)
DNA-seq (18)
Methylation profiling by high throughput sequencing (18)
ChIP-chip by array (17)
Cell line - High-throughput sequencing (14)
RNA-seq of total RNA (12)
Human - High-throughput sequencing (8)
MicroRNA profiling by high throughput sequencing (8)
High-throughput sequencing (7)
RNAi profiling by array (6)
Cell line - One-color microarray (5)
Animal - High-throughput sequencing (5)
ATAC-seq (4)
Genotyping by high throughput sequencing (4)
Human - One-color microarray (3)
Spatial transcriptomics by high-throughput sequencing (3)

Release Date

2015 (1550)
2021 (1409)
2022 (1403)
2023 (1261)
2014 (1260)
2020 (1155)
2010 (1137)
2013 (1130)
2016 (1053)
2012 (1000)
2025 (989)
2011 (955)
2019 (945)
2018 (921)
2024 (920)
2017 (845)
2009 (588)
2008 (561)
2007 (385)
2006 (229)
2005 (205)
2004 (155)
2003 (137)
2001 (117)
2026 (116)
2002 (108)
2000 (92)
1998 (88)
1999 (81)
1997 (6)

Location

United States (6)
Thailand (1)
Belgium (1)
United Kingdom (1)

Previous page
1 / 2313
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 2313
Next page

Sort by:

Relevance

Page size

Fetal Metabolic Stress Disrupts Immune Homeostasis and Induces Proinflammatory Responses in Human Immunodeficiency Virus Type 1- and Combination Antiretroviral Therapy-Exposed Infants

Increased morbidity and fetal growth restriction are reported in uninfected children born to human immunodeficiency virus type 1 (HIV-1)–infected women treated with antiretroviral (ARV) therapy. Viruses and/or pharmacological interventions such as ARVs can induce metabolic stress, skewing the cell’s...

2018-06-06 | MTBLS449 | MetaboLights

Genotyping data for seven patients from three unrelated, consanguineous multiplex families that presented with combined immunodeficiency, and were found to harbour mutations in CARMIL2

Combined immunodeficiencies are a heterogeneous collection of primary immune disorders that exhibit defects in T cell development or function, along with impaired B cell activity even in light of normal B cell maturation. CARMIL2 (RLTPR) is a protein involved in cytoskeletal organization and cell mi...

ORGANISM(S): Homo sapiens

2018-01-25 | E-MTAB-6440 | biostudies-arrayexpress

FIV host cell response

Transcriptional profiling of the host cell response to feline immunodeficiency virus (FIV) infection. Feline T-cells were infected with FIV and virus-induced gene expression changes were investigated at 24 hours post infection.

ORGANISM(S): Felis catus

2014-02-02 | E-MTAB-2083 | biostudies-arrayexpress

Comparative Expression Profile of miRNA and mRNA in Primary Peripheral Blood Mononuclear Cells Infected with Human Immunodeficiency Virus (HIV-1)

This SuperSeries is composed of the following subset Series: GSE33837: Comparative Expression Profile of miRNA and mRNA in Primary Peripheral Blood Mononuclear Cells Infected with Human Immunodeficiency Virus (HIV-1) [miRNA] GSE33877: Comparative Expression Profile of miRNA and mRNA in Primary Perip...

ORGANISM(S): Homo sapiens

2011-11-23 | E-GEOD-33879 | biostudies-arrayexpress

Human immunodeficiency virus

Human immunodeficiency virus Genome Sequencing

PRJNA72163 | ENA

Transcription profiling of human EBV transformed cell lines established from patients with a novel immunodeficiency syndrome

Lysosome-related organelles have versatile functions including protein and lipid degradation, signal transduction, and protein secretion. The molecular elucidation of rare congenital diseases affecting endosomal/lysosomal biogenesis has given insights into physiological functions of the innate and a...

ORGANISM(S): Homo sapiens

2008-06-14 | E-GEOD-6322 | biostudies-arrayexpress

Human immunodeficiency virus 1

Human immunodeficiency virus 1 Raw sequence reads

PRJNA1109555 | ENA

Feline immunodeficiency virus breed:Felis catus

Vif sequence of brazilian Feline Immunodeficiency Virus

PRJNA338130 | ENA

Gene Expression Profiles of CD21low B cells in Common Variable Immunodeficiency

The homeostasis of circulating B cell subsets in the peripheral blood of healthy adults is well regulated, but in disease it can be severely disturbed. Thus, a subgroup of patients with common variable immunodeficiency (CVID) presents with an extraordinary expansion of an unusual B cell population c...

ORGANISM(S): Homo sapiens

2009-07-30 | E-GEOD-17269 | biostudies-arrayexpress

Human immunodeficiency virus 1

Human immunodeficiency virus 1 Raw sequence reads

PRJNA562389 | ENA

Previous page
1 / 2313
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 2313
Next page

Sort by:

Relevance

Page size

23121 Results

Show results for

Organisms

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

UNIPROT ID/AC

ENSEMBL ID

CHEBI ID

Metabolite Name

First Public Date

Modelling Approach

Study status

Lab affiliation

Tags

Keyword

IsPrivate

Model Flag

Submitter Keywords

Classification

Modification

Study type

Release Date

Location

OmicsDI is part of the ELIXIR infrastructure

Tweets