Imr-90 - OmicsDI

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Metabolite Name

Deamido-NAD+ (1)
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Isobutyryl CoA (1)
P1, P4-Di(adenosine-5') tetraphosphate (1)
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3-(4-Hydroxyphenyl)propionate (1)
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O-Coumarate (1)
P-Coumarate (1)
N-Formylaspartate (1)
2-Hydroxyoctanoate (1)
Pelargonate (1)
2-Oxooctanoate (1)
2,4-Dihydroxypyrimidine-5-carboxylate (1)

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Modelling Approach

Ordinary differential equation model (1)

Modification

2x(15)N labeled L-lysine (1)
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Study type

Transcription profiling by array (61)
ChIP-seq (41)
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Release Date

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2013 (30)
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Lab affiliation

Institute of Functional Epigenetics, Helmholtz Zentrum München, 85764 Neuherberg, Germany (2)
Uppsala University, Department of Chemistry-BMC, Analytical Chemistry (2)
van 't Hoff Institute for Molecular Science (HIMS) Analytical Chemistry Group University of AMsterdam (1)
Department of Pathology, Johns Hopkins Medical School, USA (1)
1Institute of Lung Health and Immunity, Comprehensive Pneumology Center Munich with the CPC-M bioArchive, Helmholtz Center Munich, Research Center for Environmental Health, Member of the German Center of Lung Research (DZL), Germany (1)
Department of Chemistry and Chemical Biology, Harvard University, Cambridge, MA (1)
Department of Biochemistry, Western University (1)
Uppsala University, Department of Chemistry-BMC, Science for Life Laboratory, Analytical Chemistry. (1)
Genome and Systems Biology Degree Program, National Taiwan University, Department of Life Science, National Taiwan University, Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, (1)
Signalling ISP, Babraham Institute, Cambridge, UK (1)
Institute of Molecular and Cellular Biology, National Taiwan University, Taipei, Taiwan (1)
Institute of Molecular Biology (IMB), Mainz, Germany (1)

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Transcription profiling time series of the growth of human IMR-90 cells seeded on a collagen/chondroitin sulfate tissue engineering scaffold

A series of chips with some repeated measurments. Each chip represents a pool of 4 collagen/chondroitin sulfate tissue engineering scaffold meshes seeded with 1 x 10^6 IMR-90 Human Fibroblasts. mRNA was isolated at 30 minutes, 1, 2, 4, 8, 12, 24, 48, and 72 hours after seeding.

ORGANISM(S): Homo sapiens

2007-12-13 | E-GEOD-409 | biostudies-arrayexpress

Transcription profiling of human fibroblast IMR-90 cells tissue culture polystyrene time series

IMR-90 Human Fibroblasts were seeded onto TCPS dishes. mRNA was isolated at 1, 2, 4, 8, 12, 24, 48 and 96 hours. This time course was used as a control for gene expression studies on collagen/chondroitin sulfate tissue engineering scaffold materials using the same cell line.

ORGANISM(S): Homo sapiens

2008-06-12 | E-GEOD-410 | biostudies-arrayexpress

IMR90 bystander experiment 0.5 Gy alpha particle

The existence of a radiation bystander effect, in which non-irradiated cells respond to signals from irradiated cells, is well established. It raises concerns for the interpretation of risks from exposure to low doses of ionizing radiation. Sparse data exists about the bystander signaling mechanisms...

ORGANISM(S): Homo sapiens

2010-07-21 | E-GEOD-18760 | biostudies-arrayexpress

Transcription profiling of human IMR-90 cells in response to TGF-I?1

Members of the NADPH oxidase (NOX) family of enzymes, which catalyze the reduction of O2 to reactive oxygen species, have increased in number during eukaryotic evolution. Seven isoforms of the NOX gene family have been identified in mammals; however, specific roles of NOX enzymes in mammalian physio...

ORGANISM(S): Homo sapiens

2009-08-25 | E-GEOD-17518 | biostudies-arrayexpress

Homo sapiens strain:IMR-90

Gene expression analysis of human primary lung fibroblast cell line IMR-90 infected by adenovirus type 2

PRJNA236533 | ENA

NOMe-Seq analysis of IMR-90 cell line

PRJNA793875 | ENA

Sequencing of human IMR-90 at 27 and 55 population doublings

PRJNA483228 | ENA

RNA-Seq in retinoblastoma 1 (RB1) knock out IMR-90 cells

PRJNA723859 | ENA

NOMe-Seq analysis of IMR-90 cell line II