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MetabolomicsIFN-inducible phospholipid levels govern endosomal antiviral immunity
Not available
ORGANISM(S): Homo sapiens 
ST002413 | MetabolomicsWorkbench
ProteomicsTime-resolved inducible knock-down of Clp protease subunits in tobacco identifies putative protease substrates
The Clp protease complex in plants is the one with the highest complexity through all life kingdoms. It is composed of 14 nuclear- and plastid-encoded subunits which are allocated in different rings across the complex. The proteolytic ring (P-ring; ClpP3-ClpP6) and non-proteolytic ring (R-ring; ClpR...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2022-02-22 | PXD008305 | Pride
Clp protease  chloroplast  protein degradation  protease substrate  nicotiana tabacum  inducible rnai  lc-msms  shotgun proteomics 
ProteomicsInducible degradation-coupled phosphoproteomics identifies PP2A-Rts1 as a novel eisosome regulator
We developed and validated a workflow in S. cerevisiae combining auxin-inducible protein degradation with LC-MS/MS phosphoproteomics and used it to identify candidate phosphatase substrates during mitosis, when kinase activity is high. Our results revealed that PP2A-Rts1 influences dephosphorylation...
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2023-10-24 | PXD044337 | Pride
Phosphoproteomics Pp2a Rts1 Phosphatase Auxin inducible degradation 
GenomicsSynechocystis PrhaBAD Inducible Promoter
A "Leak-Free" inducible promoter for Synechocystis
PRJEB87132 | ENA
ProteomicsProteomics analysis of humulene-producing yeast integrated with a low temeprature-inducible GAL circuit for pathway induction
We analysed the proteome of two humulene-producing yeast strains under normal temperature (30 °C) cultivation condition and low temperature (25 °C) cultivation condition. In these two humulene-producing yeast strains, HUM401RU (control strain) and CI-HUM401RU (low-temperature-inducible strain), the ...
ORGANISM(S): Saccharomyces cerevisiae Saccharomyces cerevisiae (Baker's yeast) 
2024-08-10 | PXD047054 | Pride
Humulene production Low-temperature cultivation Saccharomyces cerevisiae Low-temperature-inducible gal circuit 
TranscriptomicsExpression data from inducible ES stable cell line
In order to identify the effects of the induction of the gene of interest on the mouse ES transcriptome, we performed Affymetrix Gene-Chip hybridization experiments for the inducible not-tagged cell line. Transcriptome analysis of the inducible transgenic mouse ES cell line. The E13 inducible cell l...
ORGANISM(S): Mus musculus 
2012-12-13 | E-GEOD-31166 | biostudies-arrayexpress
ProteomicsHigh-light-inducible proteins HliA and HliB: pigment binding and protein-protein interactions
High-light-inducible proteins (Hlips) are single-helix transmembrane proteins that are essential for the survival of cyanobacteria under stress conditions. The model cyanobacterium Synechocystis sp. PCC 6803 contains four Hlip isoforms (HliA-D) that associate with Photosystem II (PSII) during its as...
ORGANISM(S): Synechocystis Sp. Pcc 6803 (ncbitaxon:1148) 
2022-01-31 | MSV000088753 | MassIVE
GenomicsExpression profiling analysis of an inducible ELF3-expressing and control human bile duct cells [inducible ELF3]
Expression profiling analysis of an inducible ELF3-expressing and control human bile duct cells [inducible ELF3]
PRJNA623269 | ENA
TranscriptomicsHypoxia-independent downregulation of hypoxia inducible factor 1 targets by androgen deprivation therapy in prostate cancer.
Hypoxia inducible factor 1 (HIF1) has been shown to cooperate with the androgen receptor (AR) in activation of oncogenic pathways in prostate cancer (PCa). Here we hypothesized that HIF1 also plays a role in PCa response to androgen deprivation therapy (ADT). Comparison of gene expression profiles o...
ORGANISM(S): Homo sapiens 
2013-10-02 | E-GEOD-42868 | biostudies-arrayexpress
GenomicsInducible Avp Knockout Mouse Line
Inducible Avp Knockout Mouse Line
PRJNA1301625 | ENA
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