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TranscriptomicsRegulation of inflorescence architecture by inter-tissue-layer ligand-receptor communication between endodermis and phloem
Inflorescence architecture of Arabidopsis thaliana is regulated by ER-EPFL4/6 signaling module. To analyze the genes governed by this module, the transcriptional profiles of er-2 (allelic to er-106) mutant and epfl4 epfl6 double mutant were investigated. 9 samples are included in this study. Three b...
ORGANISM(S): Arabidopsis thaliana 
2012-03-27 | E-GEOD-35166 | biostudies-arrayexpress
TranscriptomicsAnalysis of the transcriptional responses in inflorescence buds of Jatropha curcas exposed to cytokinin treatment
Jatropha curcas L. is a potential biofuel plant. Application of exogenous cytokinin (6-benzyladenine, BA) on its inflorescence buds can significantly increase the number of female flowers, thereby improving seed yield. To investigate which genes and signal pathways are involved in the response to cy...
ORGANISM(S): Jatropha curcas 
2014-12-14 | E-GEOD-54366 | biostudies-arrayexpress
TranscriptomicsRegulatory Modules Controlling Maize Inflorescence Architecture: mRNA-seq data
In this study we used the maize (Zea mays) inflorescence to investigate gene networks that modulate determinacy, specifically the decision to allow branch growth. We characterized developmental transitions by associating spatiotemporal expression profiles with morphological changes resulting from g...
ORGANISM(S): Zea mays 
2013-11-27 | E-GEOD-51047 | biostudies-arrayexpress
TranscriptomicsTranscriptome analysis of interactions of genes, mtap1 and sgl1, involved in compound inflorescence development in Medicago truncatula
To better understand the genetic regulation of compound raceme inflorescence development, we characterized single and double mutants of the MtAP1 and SGL using microarray analysis.
ORGANISM(S): Medicago truncatula 
2018-02-06 | E-MTAB-6462 | biostudies-arrayexpress
TranscriptomicsArabidopsis thaliana Col-0 inflorescence small RNAs
Small RNA sequences from Arabidopsis thaliana Col-0 inflorescence tissues of three biological replicates. The data were analyzed to identify non-templated nucleotides in Arabidopsis small RNAs. Inflorescence samples are collected from three biological replicates of Col-0 wild-type Arabidopsis plants...
ORGANISM(S): Arabidopsis thaliana 
2016-05-18 | E-GEOD-79119 | biostudies-arrayexpress
TranscriptomicsThe dicerlike1 homologue, fuzzy tassel, is required for the regulation of meristem determinacy in the inflorescence and vegetative growth in maize
We have characterized a maize mutant, fuzzy tassel (fzt) with striking inflorescence and pleiotropic defects. fzt contains a mutation in the maize dicer-like1 homolog, a key enzyme required for microRNA (miRNA) biogenesis. By profiling the small RNA population in fzt mutants, we investigated the imp...
ORGANISM(S): Zea mays 
2015-02-20 | E-GEOD-52879 | biostudies-arrayexpress
TranscriptomicsPreliminary exploration of Oryza sativa small RNAs - Run 1 and 2
The small RNAs presented here were produced as a preliminary exploration of small RNAs in rice, and as such, various tissues and stress conditions were sampled. Small RNAs present in these samples were all mapped to the rice genome TIGR version 5. The total number of distinct mapped sequences are ...
ORGANISM(S): Oryza sativa 
2009-06-07 | E-GEOD-16248 | biostudies-arrayexpress
TranscriptomicsGene expression profile of inflorescence at early developmental stage
Gene expression profiling of infrorescence was performed to obtain overall signature of transcriptome at early developmental stages of inflorescence. After the reproductive stage transition, inflorescence samples corresponding to the early stages of development were collected based on the size. We o...
ORGANISM(S): Oryza sativa Japonica Group 
2012-12-03 | E-GEOD-39426 | biostudies-arrayexpress
TranscriptomicsComparison of SND2-overexpressing and wild type Arabidopsis thaliana Col-0 inflorescence stems
Homozygous T4 SND2-overexpressing Arabidopsis plants were grown alongside the wild type and the lower 100 mm of primary inflorescence stems sampled at 4 and 8 weeks of age A direct comparison was used (box plot). Three biological replicates and two technical replicates (dye swaps) were included for ...
ORGANISM(S): Arabidopsis thaliana 
2011-11-30 | E-GEOD-29693 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Gerbera inflorescence sample was compared with a gerbera leaf sample
Gerbera inflorescence sample was compared with a gerbera leaf sample in order to identify flower specific genes. Samples were pooled from different developmental stages and alltogether 8 replicates (including 2 biological replicates with 4 technical replicates each) were independently labelled. Both...
ORGANISM(S): Gerbera hybrid cultivar 
2004-12-31 | E-MEXP-206 | biostudies-arrayexpress
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