Inside-out proteins

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Unknown (243)
Transcriptomics (83)
Proteomics (81)
Genomics (23)
Metabolomics (3)
Methylation profiling (1)
Other (1)

Organisms

Homo sapiens (24)
Schizosaccharomyces pombe (12)
Mus musculus (11)
Arabidopsis thaliana (10)
Rattus norvegicus (3)
Mycobacterium tuberculosis (3)
Candida albicans (3)
Saccharomyces cerevisiae (2)
Drosophila melanogaster (2)
Danio rerio (2)
dechlorinating enrichment culture KB-1 (1)
Vanderwaltozyma polyspora (1)
Salmonella enterica (1)
Haemophilus influenzae (1)
Spodoptera frugiperda (1)
Streptomyces coelicolor A3(2) (1)
Xylella fastidiosa (1)
Streptomyces coelicolor (1)
Porphyromonas gingivalis (1)
Rattus rattus (1)
Streptococcus pneumoniae (1)
Vibrio cholerae (1)
Acinetobacter baumannii (1)
Salmonella enterica subsp. enterica serovar Typhimurium (1)
Anastatus japonicus (1)
Mesocomys (1)
Ailuropoda melanoleuca (1)
Synechocystis (1)
Plasmodium falciparum (1)
cellular organisms (1)

Organisms

Homo sapiens (6)
Arabidopsis thaliana (3)
Mus musculus (3)
Acaryochloris marina MBIC11017 (1)
Candida albicans (1)
Salmonella enterica subsp. enterica serovar Typhimurium (1)
Mycobacterium tuberculosis (1)
Salmonella enterica (1)
Vitis vinifera (1)
Danio rerio (1)
Drosophila melanogaster (1)

Repository

biostudies-arrayexpress (77)
pride (75)
ENA (20)
geo (11)
MetaboLights (3)
iProX (2)
jPOST (2)
MassIVE (1)
PAXDB (1)

Tissue

Cell culture (16)
Blood cell (4)
Epithelial cell (4)
Permanent cell line cell (3)
Plant cell (3)
Antenna (2)
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Saliva (2)
Blood (2)
Feces (2)
Cell suspension culture (2)
Epithelial cell differentiation involved in embryonic placenta development (1)
Carcinoma cell (1)
Tuber (1)
Midgut (1)
Seminal vesicle fluid (1)
Pancreatic ductal cell (1)
Prokaryotic cell (1)
Eye (1)
Tooth (1)
Flower (1)
Erythrocyte (1)
Leukocyte (1)
Cerebrospinal fluid (1)
Fibroblast (1)
Cell line cell (1)
Skin (1)
Lung (1)
Pancreas (1)
Salivary gland (1)

Disease

Disease free (5)
Chronic granulomatous disease (1)
IRAK-4 Q293X mutation (1)
S enteritidis (1)
Normal (1)
Pancreatic carcinoma (1)
Tularemia (1)
Bordetella parapertussis whooping cough (1)
Malaria (1)
Malignant neoplasm of ovary (1)
Pancreatic cancer (1)
Pancreatic ductal adenocarcinoma (1)
Leishmaniasis (1)
Crohn's disease (1)
Breast cancer (1)
Type 2 diabetes mellitus (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (75)
Shotgun proteomics (45)
Bottom-up proteomics (11)
Affinity purification coupled with mass spectrometry proteomics (10)
SWATH MS (7)
Gel-based experiment (6)
Data-dependent acquisition (4)
Data-independent acquisition (4)
Chemical cross-linking coupled with mass spectrometry proteomics (3)
Mass spectrometry assay (2)
Mass spectrometry (1)
DiaPASEF (1)
Top-down proteomics (1)

Instrument Platform

Illumina HiSeq 2000 (3)
Scanning hardware (2)
Biotech Photometer (1)
Other (1)
Illumina Genome Analyzer IIx (1)
G2565BA DNA microarray scanner [Agilent] (1)
Illumina Genome Analyzer II (1)
NextSeq 550 (1)
TimsTOF Pro (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - negative - hilic (1)

Publication Date

2022 (20)
2023 (16)
2011 (15)
2025 (15)
2010 (14)
2008 (12)
2012 (11)
2021 (11)
2019 (7)
2024 (7)
2026 (7)
2006 (6)
2007 (5)
2016 (4)
2015 (4)
2017 (4)
2020 (3)
2014 (3)
2013 (3)
2009 (2)
2005 (2)
2018 (1)

UNIPROT ID/AC

Q7VTM5_BORPE (1)
Q7VUX8_BORPE (1)
Q7VT90_BORPE (1)
Q7VZ34_BORPE (1)
Q7VSL7_BORPE (1)
Q7VSQ5_BORPE (1)
Q7VT25_BORPE (1)
Q7VZS4_BORPE (1)
Q7VUN3_BORPE (1)
LOLA_BORPE (1)
Q7VU86_BORPE (1)
Q7VXX1_BORPE (1)
Q7VU33_BORPE (1)
Q7VVJ6_BORPE (1)
Q7VRZ4_BORPE (1)
Q7VY09_BORPE (1)
Q7VUU6_BORPE (1)
Q7VZN7_BORPE (1)
Q7VUN9_BORPE (1)
Q7VZ84_BORPE (1)
Q7VUX0_BORPE (1)
Q7W0C2_BORPE (1)
Q7VTM4_BORPE (1)
Q7VYA5_BORPE (1)
Q7VW73_BORPE (1)
Q7VUW1_BORPE (1)
Q7VTV1_BORPE (1)
Q7VYP1_BORPE (1)
Q7VS00_BORPE (1)
Q7VWI0_BORPE (1)

CHEBI ID

CHEBI:70808 (2)
CHEBI:90355 (2)
CHEBI:73018 (2)
CHEBI:64390 (2)
CHEBI:17857 (2)
CHEBI:165843 (2)
CHEBI:18186 (2)
CHEBI:28794 (2)
CHEBI:68848 (2)
CHEBI:15830 (2)
CHEBI:40410 (2)
CHEBI:35704 (2)
CHEBI:27468 (2)
CHEBI:24813 (2)
CHEBI:17764 (2)
CHEBI:545959 (2)
CHEBI:30832 (2)
CHEBI:17553 (2)
CHEBI:16750 (2)
CHEBI:28997 (2)
CHEBI:73024 (2)
CHEBI:18211 (2)
CHEBI:16811 (2)
CHEBI:24898 (2)
CHEBI:26986 (2)
CHEBI:27266 (2)
CHEBI:15901 (2)
CHEBI:17822 (2)
CHEBI:17568 (2)
CHEBI:17821 (2)

Metabolite Name

2'-Deoxysepiapterin (2)
Acetylsalicylic acid (2)
4-Hydroxycyclohexylcarboxylic acid (2)
Columbianetin (2)
25-Hydroxyvitamin D2 (2)
Succinylacetone (2)
3,3-Dimethylglutaric acid (2)
Oxoamide (2)
3-Methyloxindole (2)
Cotinine N-oxide (2)
Bicine (2)
Acetophenone (2)
Indole-3-propionic acid (2)
N6,N6,N6-Trimethyl-L-lysine (2)
3-Hydroxytetradecanedioic acid (2)
Acrylic acid (2)
Arecoline (2)
4-Vinylguaiacol (2)
Dimethyl sulfoxide (2)
Ornithine (2)
Kynurenic acid (2)
N-Acetylputrescine (2)
7-Methylguanine (2)
5-Methyluridine (2)
UMP (2)
3-Hydroxydodecanedioic acid (2)
Dihydrouracil (2)
Tropine (2)
Trigonelline (2)
Piperidine (2)

First Public Date

2014 (10)
2024 (2)
2022 (2)
2017 (2)
2026 (1)
2023 (1)
2021 (1)
2013 (1)

Classification

bacteria (3)
fungi (1)

Study type

Transcription profiling by array (55)
Other (5)
ChIP-chip by array (4)
ChIP-seq (3)
RNA-seq of coding RNA (3)
RIP-chip by array (1)
Human - High-throughput sequencing (1)
Translation profiling (1)
RNAi profiling by array (1)
Comparative genomic hybridization by array (1)
Genotyping by high throughput sequencing (1)
RNA-seq of non coding RNA (1)

Release Date

2023 (28)
2021 (27)
2022 (22)
2015 (22)
2010 (21)
2014 (20)
2012 (20)
2011 (20)
2020 (15)
2019 (15)
2008 (15)
2016 (14)
2017 (14)
2018 (13)
2013 (10)
2009 (8)
2006 (8)
2025 (7)
2007 (6)
2024 (6)
2005 (2)
2026 (2)
2004 (2)
2002 (1)
2001 (1)
1996 (1)

Lab affiliation

Department of Chemistry Center for Gastrointestinal Biology and Disease Integrated Program for Biological and Genome Sciences University of North Carolina at Chapel Hill (2)
Kobilka Institute of Innovative Drug Discovery, School ofMedicine, The Chinese University of Hong Kong, Shenzhen, China, 518172 (2)
Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Denmark (2)
Department of Molecular, Cellular and Developmental Biology. Yale University, 260 Whitney Ave, New Haven, CT. 06520, USA (2)
Applied Science and Technology Department–BioSolar Lab, Politecnico di Torino,Italy (1)
Instituto de ecologia, A.C. (1)
University of Colorado - Anschutz Medical Campus, Department of Biochemistry and Molecular Genetics, Aurora, CO USA (1)
Department of Genetics, Stanford School of Medicine, USA (1)
University of the Sunshine Coast, Maroochydore DC, Queensland 4557, Australia (1)
AnimalS health Territories Risks Ecosystems (ASTRE Unit CIRAD), France (1)
Department Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Martinsried, Germany; Protein Research, NNF Center for Protein Research, Copenhagen, Denmark (1)
University of Edinburgh, UK (1)
1 Bioanalytics, Institute of Biotechnology, Technische Universität Berlin, 13355 Berlin, Germany 2 Wellcome Centre for Cell Biology, School of Biologic Sciences, University of Edinburgh, Edinburgh (1)
School of Life Sciences Faculty of Science University of Technology Sydney NSW 2007 (1)
Senior Researcher - Principal Investigator, Computational and Chemical Biology, Istituto Italiano di Tecnologia Via Morego, 30 16163 Genova - Italy Tel: +39 010 28961 - C.F.: 97329350587 - P.Iva: 09198791007 (1)
Department of Pharmaceutical Sciences, University of Illinois at Chicago (1)
Institute of Parasitology, Centre for Biology, Academy of Science of the Czech Republic, Czech Republic Faculty of Science, University of South Bohemia in Ceske Budejovice, Czech Republic (1)
Institute of Deep-sea Science and Engineering, Chinese Academy of Sciences (1)
Unité de Parasitologie Moléculaire et Signalisation, Institut Pasteur, Paris (1)
Instituto de Ecologia, A.C. (1)
733 N. Broadway Miller Research Building room 527 Johns Hopkins University Baltimore, MD 21205 (1)
1-University of Lille, CNRS, UAR 3290, MSAP, Miniaturisation pour la Synthèse l'Analyse et la Protéomique, F-59650 Villeneuve d’Ascq, France 2-Shrieking sixties, 1-3 Allée Lavoisier, F-59650 Villeneuve d'Ascq, France. (1)
Institute of Biomedical Sciences, Academia Sinica (1)
Professor, Molecular Medicine & Scientific Director, The Wertheim UF Scripps Institute (1)
Department of Biomolecular Chemistry and Department of Chemistry, University of Wisconsin-Madison, Madison, WI, USA. Morgridge Institute for Research, Madison, WI (1)
Hubrecht Institute, Royal Netherlands Academy of Arts and Sciences (KNAW), Uppsalalaan 8, 3584CT, Utrecht, the Netherlands. (1)
*Dr. Arun Sharma Protein Biochemistry and Structural Biology Division National Institute of Malaria Research (ICMR) Department of Health Research, Ministry of Health and Family Welfare, Govt. of India Sector-8, Dwarka, New Delhi- 110077 (1)
School of Biotechnology and Biomolecular Sciences, University of New South Wales, NSW, Australia (1)
Universidade Federal de Minas Gerais (1)
Laboratory for Applied Science and Technology in Health, Carlos Chagas Institute, Oswaldo Cruz Foundation (Fiocruz),Curitiba, Brazil (1)

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Dynamic translocation of Inside-Out proteins to the cell surface underlies cellular adaptation to cancer-induced stress.

Inside-out (I-O) protein display, the non-canonical surface localization of intracellular proteins, represents an underexplored feature of tumor cell biology. Here, we map the molecular landscape and trafficking mechanisms that control the presentation of I-O proteins on cancer cell membranes. Emplo...

ORGANISM(S): Homo sapiens (Human)

2026-03-09 | PXD069264 | Pride