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TranscriptomicsDNA methylation profiles of liver and placenta technical replicates
We profiled DNA from liver and placenta technical replicate samples on the Illumina HumanMethylation450 BeadChip array. There technical replicates represent a single liver and a single placenta sample. Bisulphite converted DNA was hybridized to Illumina HumanMethylation450 BeadChip arrays
ORGANISM(S): Homo sapiens 
2014-02-19 | E-GEOD-52731 | biostudies-arrayexpress
UnknownUsing the R Package crlmm for Genotyping and Copy Number Estimation.
Not available
S-EPMC3329223 | biostudies-literature
TranscriptomicsTranscription profiling of mouse liver to identify the effect of intermittent hypoxia on gene expression in the liver of ob/ob mice
All animals were kept in a controlled environment (22-24 °C with a 12 h : 12 h light : dark cycle; lights on at 09.00) on a standard chow diet with free access to water. Five ob/ob mice (sample_ids GSM32865-GSM32869) were placed in the intermittent hypoxia (IH) chamber and subjected to IH for 12 con...
ORGANISM(S): Mus musculus 
2007-11-01 | E-GEOD-1873 | biostudies-arrayexpress
TranscriptomicsThe effect of intermittent hypoxia on gene expression in the liver of ob/ob mice
All animals were kept in a controlled environment (22-24 °C with a 12 h : 12 h light : dark cycle; lights on at 09.00) on a standard chow diet with free access to water. Five ob/ob mice (sample_ids GSM32865-GSM32869) were placed in the intermittent hypoxia (IH) chamber and subjected to IH for 12 con...
ORGANISM(S): Mus musculus 
2004-10-27 | GSE1873 | GEO
TranscriptomicsA small molecule accelerates neuronal differentiation in the adult rat
Adult neurogenesis occurs in mammals and provides a mechanism for continuous neural plasticity in the brain.However, little is known about the molecular mechanisms regulating hippocampal neural progenitor cells (NPCs) and whether their fate can be pharmacologically modulated to improve neural plasti...
ORGANISM(S): Rattus norvegicus 
2010-08-18 | E-GEOD-23668 | biostudies-arrayexpress
TranscriptomicsDNA methylation data from non-immortalized lymphocyte samples from participants of the AGES Reykjavik Study
Genome-wide DNA methylation was studied to identify regions with extreme inter-individual variability, half of which show stability within-person, and some of which show covariation with body mass index consistently and are located in or near genes previously implicated in regulating body weight or ...
ORGANISM(S): Homo sapiens 
2010-09-14 | E-GEOD-23858 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of chicken Bcl6 deficient DT40 B cell line to investigate the targets of Bcl6 which is required for germinal center formation
The transcription factor Bcl6 is required for germinal center formation and deregulated expression of Bcl6 has been observed in lymphomas. To gain insight to the function of Bcl6 in terminal differentiation of B cells to plasma cells and to investigate the targets of Bcl6, we established a Bcl6 defi...
ORGANISM(S): Gallus gallus 
2010-02-17 | E-MEXP-2062 | biostudies-arrayexpress
TranscriptomicsExpression data from Arabidopsis thaliana under phosphate starvation stress
We performed a transcriptomic analysis of Pi starvation responses in Arabidopsis thaliana (Columbia-0) wild type plants under phosphate starvation stress and in plants with altered PHR1(-like) activity, comparing mutants of phr1 and phr1-phl1 grown in phosphate-lacking medium. Results show the centr...
ORGANISM(S): Arabidopsis thaliana 
2010-12-09 | E-GEOD-16722 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of primary fibroblasts from a family with autosomal recessive Hutchinson-Gilford Progeria Syndrome
Hutchinson-Gilford progeria syndrome (HGPS) is a genetic disorder displaying features reminiscent of premature senescence caused by germline mutations in the LMNA gene encoding lamin A and C, essential components of the nuclear lamina. By studying a family with homozygous LMNA mutation (K542N), we s...
ORGANISM(S): Homo sapiens 
2011-06-27 | E-MEXP-3097 | biostudies-arrayexpress
TranscriptomicsExposure to Propylthiouracil in Pregnant Mice Potentiates the Transcriptional Response to Thyroid Hormone in the Fetal Cerebral Cortex
Although the effects of thyroid hormones (TH) on the brain development have been extensively studied perinatally, effects of TH of maternal origin on the fetal brain development have been largely unexplored. We applied a high throughput study on the mouse models with aberrant TH levels on gestation ...
ORGANISM(S): Mus musculus 
2014-02-04 | E-GEOD-43927 | biostudies-arrayexpress
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