Iso-seq - OmicsDI

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CHEBI ID

CHEBI:17620 (3)
CHEBI:30816 (3)
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CHEBI:15963 (2)
CHEBI:16010 (2)
CHEBI:16040 (2)
CHEBI:16163 (2)
CHEBI:16235 (2)

Metabolite Name

1-linolenoyl-GPC (18:3)* (2)
1-linoleoyl-GPC (18:2) (2)
1-linoleoyl-GPE (18:2)* (2)
1-methyladenine (2)
1-methylhistidine (2)
1-oleoyl-2-linoleoyl-GPC (18:1/18:2)* (2)
1-palmitoyl-2-linoleoyl-GPC (16:0/18:2) (2)
1-palmitoyl-2-linoleoyl-GPE (16:0/18:2) (2)
1-palmitoyl-2-linoleoyl-GPI (16:0/18:2) (2)
1-palmitoyl-2-oleoyl-GPC (16:0/18:1) (2)
1-palmitoyl-2-oleoyl-GPI (16:0/18:1)* (2)
1-palmitoyl-GPC (16:0) (2)
1-palmitoyl-GPE (16:0) (2)
1-palmitoyl-GPI (16:0) (2)
1-stearoyl-2-oleoyl-GPC (18:0/18:1) (2)
2'-deoxyadenosine (2)
2,3-dihydroxyisovalerate (2)
2-dimethylaminoethanol (2)
2-hydroxyglutarate (2)
2-isopropylmalate (2)
2-oxindole-3-acetate (2)
3-(3-amino-3-carboxypropyl)uridine* (2)
3-amino-2-piperidone (2)
3-aminoisobutyrate (2)
3-deoxyoctulosonate (2)
3-formylindole (2)
3-hydroxy-3-methylglutarate (2)
3-hydroxyadipate (2)
3-methyl-2-oxobutyrate (2)
3-methylhistidine (2)

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protozoa (2)
bacteria (2)
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Study type

RNA-seq of coding RNA (37)
ChIP-seq (5)
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Transcription profiling by array (4)
RNA-seq of coding RNA from single cells (4)
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Human - High-throughput sequencing (1)
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Lab affiliation

Cancer Science Institute of Singapore, National University of Singapore (1)
Comparative Genomics lab - Institute of Evolutionary Biology (IBE) Barcelona (Spain) (1)
Institute of Systems Biology (INBIOSIS), Universiti Kebangsaan Malaysia, Bangi 43600 Selangor Darul Ehsan, MALAYSIA (1)
Max Delbrück Center for Molecular Medicine in the Helmholtz Association (1)
School of Food Science and Technology, Jiangnan University, Wuxi 214122, China; (1)
University of Vienna (1)

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Iso-seq seuqencing of leukemic pooled samples

2 samples have been prepared for ISO-seq sequencing. CD34+ blast cells from 5 MDS patients before 5-AZA treatment (GEO531A16, GEO531A13, GEO531A5, GEO531A11, GEO531A3) were pooled to generate one sample and 2 AML non-treated and 2 CMML non-treated cells (GEO531A2, GEO531A9, GEO531A6, GEO531A7) were ...

ORGANISM(S): Homo sapiens

2019-12-10 | E-MTAB-8195 | biostudies-arrayexpress

PacBio Iso-Seq transcriptome sequencing data of multiplexed maize cDNA

Full-Length cDNA transcriptome (Iso-Seq) data sequenced on the PacBio Sequel system using 2.1 chemistry. Multiplexed cDNA library of 12 samples (3 tissues x 4 strains). Tissues: root, embryo, endosperm. Strains: B73, Ki11, B73xKi11, Ki11xB73.

ORGANISM(S): Zea mays

2020-02-25 | E-MTAB-7837 | biostudies-arrayexpress

phoPha1 Iso-Seq

Pholcus phalangioides, Iso-Seq

PRJEB109120 | ENA

parTep4 Iso-Seq

Parasteatoda tepidariorum, Iso-Seq

PRJEB109116 | ENA

Chicken Iso-Seq Macrophage

PRJEB25381 | ENA

Iso-Seq analysis of Miscanthus sinensis plants

Iso-Seq (PacBio) sequencing was performed to generate a reference transcriptome library of M. sinensis.

ORGANISM(S): Miscanthus sinensis

2025-11-21 | E-MTAB-15228 | biostudies-arrayexpress

Broiler chicken Iso-Seq Ovary

PRJEB24826 | ENA

AIL chicken Iso-Seq Brain

PRJEB25416 | ENA

Iso-Seq analysis of cell suspension culture and plantlets of Hypericum perforatum

Iso-Seq (PacBio) sequencing was performed to generate a reference library of H. perforatum. We generated genome-wide transcriptome data from in vitro cell suspensions and shoot cultures of H. perforatum.

ORGANISM(S): Hypericum perforatum

2022-12-31 | E-MTAB-11423 | biostudies-arrayexpress

PacBio Iso-seq of Lupinus angustifolius L. leaf and stem transcriptomes

The aim of this experiment was to obtain full length transcript sequences of genes expressed in leaves and stems of narrow-leafed lupin (Lupinus angustifolius L.) using PacBio Iso-Seq. Total RNA was isolated from leaves and stems of five narrow-leafed lupin (Lupinus angustifolius L.) genotypes with ...

ORGANISM(S): Lupinus angustifolius

2026-06-30 | E-MTAB-16429 | biostudies-arrayexpress

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954 Results

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