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Unknown (1930)
Transcriptomics (666)
Proteomics (74)
Genomics (55)
Metabolomics (25)
Other (2)

Organisms

Mus musculus (356)
Homo sapiens (262)
Rattus norvegicus (32)
Escherichia coli (17)
Trypanosoma brucei (16)
Arabidopsis thaliana (14)
Danio rerio (13)
Solanum lycopersicum (7)
Ovis aries (5)
Sus scrofa (5)
Saccharomyces cerevisiae (5)
Bos taurus (4)
Corynebacterium glutamicum (3)
Xenopus laevis (3)
Schizosaccharomyces pombe (3)
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Symplocarpus renifolius (2)
Macaca mulatta (2)
Trypanosoma brucei brucei (2)
Oryza sativa (2)
Gallus gallus (2)
Hymenochirus boettgeri (1)
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Bombyx mori (1)
Aspergillus fumigatus (1)
Apis mellifera (1)
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Oryza sativa Japonica Group (1)
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Repository

biostudies-arrayexpress (711)
pride (29)
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Tissue

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Disease

Not Available (2)
MAS (1)
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Technology Type

Mass Spectrometry (29)
Mass spectrometry (20)
Shotgun proteomics (19)
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Bottom-up proteomics (3)
Data-dependent acquisition (3)
Mass spectrometry imaging (3)
All-ion fragmentation (2)
Illumina HiSeq 4000, ILLUMINA (1)
NMR spectroscopy assay (1)
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SWATH MS (1)

Instrument Platform

Illumina NovaSeq 6000 (26)
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Illumina HiSeq 2500 (4)
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DNBelab C Series High-throughput Single-cell RNA Library Preparation Set V3.0 (MGI Tech) (1)
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Avatarget 12-well dual-chamber organ-on-chip system; AvatarFlow Organ Chip Flow Initiation Controller System (Avatarget Co., Ltd., Suzhou, China) (1)
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Applied Biosystems (1)
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R (1)
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Illumina NextSeq 500 (1)
NextSeq 550 (1)
Illumina HiSeq 3000 (1)

Publication Date

2013 (102)
2014 (100)
2015 (94)
2012 (82)
2016 (72)
2011 (67)
2010 (63)
2008 (29)
2021 (27)
2009 (24)
2024 (22)
2022 (18)
2025 (16)
2017 (16)
2023 (15)
2020 (12)
2018 (12)
2007 (12)
2019 (11)
2026 (8)
2006 (4)
2005 (1)

UNIPROT ID/AC

2A5D_YEAST (2)
2AAA_YEAST (2)
2ABA_YEAST (2)
3HAO_YEAST (2)
6P21_YEAST (2)
6PGD1_YEAST (2)
AAKG_YEAST (2)
AAP1_YEAST (2)
AATC_YEAST (2)
AATM_YEAST (2)
AB140_YEAST (2)
ABF1_KLULA (2)
ABF1_YEAST (2)
ABF2_YEAST (2)
ABP1_YEAST (2)
ACA2_YEAST (2)
ACAC_YEAST (2)
ACBP_YEAST (2)
ACE2_YEAST (2)
ACEA_KLULA (2)
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ACH1_YEAST (2)
ACL4_YEAST (2)
ACM1_YEAST (2)
ACO1_YEAST (2)
ACON2_YEAST (2)
ACON_YEAST (2)
ACS1_KLULA (2)
ACS1_YEAST (2)
ACS2_KLULA (2)

CHEBI ID

CHEBI:16610 (7)
CHEBI:17964 (7)
CHEBI:15354 (6)
CHEBI:15428 (6)
CHEBI:15741 (6)
CHEBI:15891 (6)
CHEBI:15940 (6)
CHEBI:17154 (6)
CHEBI:17750 (6)
CHEBI:30915 (6)
CHEBI:15356 (5)
CHEBI:15676 (5)
CHEBI:16010 (5)
CHEBI:16199 (5)
CHEBI:16235 (5)
CHEBI:16335 (5)
CHEBI:16449 (5)
CHEBI:16708 (5)
CHEBI:16765 (5)
CHEBI:16811 (5)
CHEBI:16919 (5)
CHEBI:16958 (5)
CHEBI:17012 (5)
CHEBI:17084 (5)
CHEBI:17148 (5)
CHEBI:17368 (5)
CHEBI:17376 (5)
CHEBI:17497 (5)
CHEBI:17521 (5)
CHEBI:17568 (5)

Metabolite Name

ADP (4)
2,5-Dihydroxybenzoate (3)
ATP (3)
Adenine (3)
Betaine (3)
CDP (3)
CMP (3)
Cholesterol (3)
Choline (3)
Citrulline (3)
Digalacturonate (3)
Glutathione (3)
Homovanillate (3)
IDP (3)
IMP (3)
L-Histidine (3)
N-Acetylleucine (3)
N-Acetylmethionine (3)
NADPH (3)
Nicotinate (3)
Phosphonoacetate (3)
Phosphorylcholine (3)
Pimelate (3)
Succinate (3)
Taurine (3)
Terephthalate (3)
Trehalose 6-phosphate (3)
UDP (3)
UDP-glucose (3)
UDP-glucuronate (3)

Modification

Not available (1)

Study type

Transcription profiling by array (497)
RNA-seq of coding RNA (93)
ChIP-seq (30)
Methylation profiling by high throughput sequencing (10)
RNA-seq of coding RNA from single cells (9)
ChIP-chip by tiling array (7)
Transcription profiling by SAGE (6)
Comparative genomic hybridization by array (6)
Unknown experiment type (5)
ATAC-seq (5)
Methylation profiling by array (5)
ChIP-chip by array (4)
RNA-seq of non coding RNA (4)
Other (3)
Differential (2)
Human - One-color microarray (2)
Cell line - High-throughput sequencing (2)
Transcription profiling by RT-PCR (2)
MeDIP-seq (1)
Human - High-throughput sequencing (1)
Cell line - One-color microarray (1)
Plant - One-color microarray (1)
Transcription profiling by tiling array (1)
RNAi profiling by array (1)
Genotyping by array (1)
CLIP-seq (1)
MicroRNA profiling by high throughput sequencing (1)
ScATAC-seq (1)
Single nucleus RNA sequencing (1)
MicroRNA profiling by array (1)

Release Date

2022 (261)
2023 (229)
2024 (210)
2021 (202)
2025 (197)
2020 (174)
2013 (148)
2016 (146)
2015 (142)
2014 (142)
2019 (125)
2012 (111)
2018 (110)
2017 (105)
2011 (86)
2010 (77)
2026 (47)
2008 (44)
2009 (37)
2007 (17)
2006 (11)
2005 (6)
2004 (3)
2000 (3)
2003 (2)
2002 (2)
2001 (1)
1999 (1)
1998 (1)
1991 (1)

Lab affiliation

Department of Proteomics and Signal Transduction, Max-Planck-Institute of Biochemistry, Munich, Germany (4)
School of Agriculture, Meiji University (4)
DZNE Munich, Neuroproteomics, Feodor-Lynen Str. 17, 81377 Munich, Germany (2)
Cancer Science Institute of Singapore, National University of Singapore, Singapore (1)
Collège de France, Oncologie Cellulaire et Moléculaire, PSL University, INSERM UMR 1050, CNRS UMR 7241, INSERM UMR 944, CNRS UMR 7212, Université de Paris, IRSL, Hôpital St. Louis Paris France (1)
Complex Carbohydrate Research Center, Department of Biochemistry and Molecular Biology, University of Georgia, Athens, GA 30602, USA. (1)
DZNE Munich, Neuroproteomics, Feodor-Lynen-Str. 17, 81377 München, Germany (1)
Department of Biomedical Sciences, Elson S. Floyd College of Medicine, Washington State University, WA 99210 (1)
Department of Neuropathology, Medical Research institute and Center for Brain Integration Research, Tokyo Medical and Dental University (1)
Division of Pediatric Hematology and Oncology, Department of Pediatrics, The Pennsylvania State University College of Medicine (1)
Heidelberg University Hospital, Department of Neurology (1)
Laboratoire PRISM INSERM U1192 Université de Lille Villeneuve d'ascq France (1)
Laboratory for Developmental Genetics, RIKEN Center for Integrative Medical Sciences (1)
Professor of Molecular and Comparative Pathobiology and Oncology The Johns Hopkins University School of Medicine Baltimore, MD 21205 (1)
Proteome Research (AG Stühler) Heinrich Heine University Düsseldorf Universitätsstraße 1 40225 Düsseldorf Germany (1)
Proteome Research (AG Stühler) Institute of Molecular Medicine I Heinrich Heine University Düsseldorf Universitätsstraße 1 40225 Düsseldorf (1)
Research Unit Molecular Immune Regulation, Helmholtz Center Munich, Munich, Germany; Institute for Immunology, Biomedical Center, Ludwig-Maximilians-Universität in Munich, Planegg-Martinsried, Germany (1)
Sapporo Medical University School of Medicine (1)
Tokyo University of Pharmacy and Life Sciences (1)
University of Geogia Complex Carbohydrate Research Center, Haltiwanger Lab, United States (1)
University of Melbourne (1)
vall hebron institute of research (1)

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Identification of proteins present in LACTB solutions overexpressed and purified from E.coli by LC-MS/MS.

Non-enzymatic D-isomerization of aspartic acid in proteins has been observed in lesions associated with age-related diseases, including cataracts and Alzheimer's disease. Since D-isomerization of Asp disrupts the physiological conformation of proteins, it has been postulated that D-isomerization of ...

ORGANISM(S): Escherichia Coli

2025-04-19 | PXD062910 | JPOST Repository

A master cistromic circuit governing hepatic fibrogenesis [ChIP-seq]

Liver fibrosis is a reversible wound-healing response to liver injury and hepatic stellate cells (HSCs) are central cellular players that mediate hepatic fibrogenesis. However, the molecular mechanisms that govern this process remain unclear. Here, we reveal a novel cistromic circuit in HSCs compris...

ORGANISM(S): Homo sapiens

2013-04-29 | E-GEOD-38103 | biostudies-arrayexpress

Actinomycin D-induced mitochondrial stress targets PML during NPM1c-AML therapy

Microarrays transcriptomic data analyses from acute myeloid leukemia cell line OCI-AML2 and primary acute myeloid leukemia cells treated with actinomycin D.

ORGANISM(S): Homo sapiens

2021-05-10 | E-MTAB-10397 | biostudies-arrayexpress

Mechanical Properties of ZTO, ITO, and a-Si:H Multilayer Films for Flexible Thin Film Solar Cells.

Not available

S-EPMC5503339 | biostudies-literature

Novel D-A-D Fluorescent Dyes Based on 9-(p-Tolyl)-2,3,4,4a,9,9a-hexahydro-1H-carbazole as a Donor Unit for Solution-Processed Organic Light-Emitting-Diodes.

Not available

S-EPMC8151704 | biostudies-literature

A master cistromic circuit governing hepatic fibrogenesis [expression array]

Liver fibrosis is a reversible wound-healing response to liver injury and hepatic stellate cells (HSCs) are central cellular players that mediate hepatic fibrogenesis. However, the molecular mechanisms that govern this process remain unclear. Expression profiling was used to explore the potential im...

ORGANISM(S): Rattus norvegicus

2013-04-29 | E-GEOD-41579 | biostudies-arrayexpress

Photocatalytic Edge Growth of Conductive Gold Lines On Microstructured TiO₂-ITO Substrates.

Not available

S-EPMC11394007 | biostudies-literature

Effects of Pyrazine Derivatives and Substituted Positions on the Photoelectric Properties and Electromemory Performance of D⁻A⁻D Series Compounds.

Not available

S-EPMC6213557 | biostudies-literature

Conjoint pathologic cascades mediated by ALS/FTLD-U linked RNA-binding proteins TDP-43 and FUS.

Not available

S-EPMC3198978 | biostudies-literature

Free d-Amino Acids in Salivary Gland in Rat.