Jackson M S MS - OmicsDI

Show results for

Unknown (1398)
Proteomics (116)
Transcriptomics (63)
Metabolomics (48)
Genomics (18)
Genomic (1)
Other (1)

Organisms

Acidithiobacillus ferrooxidans ATCC 53993 (102)
Aerococcus urinae NBRC 15544 = CCUG 36881 (102)
Allexis (102)
Arabidopsis thaliana (102)
Cyanophora paradoxa (102)
Ensifer adhaerens (102)
Enterococcus faecalis (102)
Globicatella sanguinis (102)
Helianthus annuus (102)
Histomonas meleagridis (102)
Leishmania major strain Friedlin (102)
Listeria monocytogenes (102)
Lotus japonicus (102)
Marchantia polymorpha (102)
Medicago truncatula (102)
Methylohalobius crimeensis 10Ki (102)
Mus musculus (102)
Mycobacterium tuberculosis (102)
Ophrys garganica (102)
Ophrys sphegodes (102)
Mus musculus (45)
Homo sapiens (30)
Zea mays (4)
Arabidopsis thaliana (4)
Rhipicephalus microplus (1)
Ambystoma mexicanum (1)
unidentified (1)
Bacillus subtilis (1)
Pseudomonas aeruginosa (1)
Bos taurus (1)

Repository

pride (102)
biostudies-arrayexpress (72)
MetaboLights (46)
EGA (15)
MassIVE (7)
GNPS (2)
dbGaP (1)
jPOST (1)
PanoramaPublic (1)

Tissue

Cell culture (16)
Brain (7)
Heart (6)
Kidney (6)
Blood plasma (5)
Lung (5)
Blood cell (4)
Epithelial cell (4)
Photosynthetic cell (4)
Bone marrow (3)
Fibroblast (3)
Macrophage (3)
Permanent cell line cell (3)
Primary cell (3)
Blood (2)
Retina (2)
Skeletal muscle (2)
Venom (2)
Abdominal adipose tissue (1)
Aortic endothelial cell (1)
Aortic smooth muscle cell (1)
Brown adipose tissue (1)
Cardiocyte (1)
Cell line cell (1)
Cell suspension culture (1)
Cerebrospinal fluid (1)
Corneal endothelial cell (1)
Early embryonic cell (1)
Saccharomyces cerevisiae metabolite (1)
T cell (1)

Disease

Cardiovascular system disease (4)
Disease free (3)
Normal (2)
Acute leukemia (2)
None- acute control (1)
Hyperglycaemic (1)
None- Acute Control (1)
3-methylglutaconic aciduria type 9 (1)
Acute myeloid leukemia (1)
Alpers-Huttenlocher syndrome (1)
Alzheimer's disease (1)
Brain glioblastoma multiforme (1)
Breast cancer (1)
Centronuclear myopathy 5 (1)
Chronic myeloid leukemia (1)
Chronic obstructive pulmonary disease (1)
Developmental and epileptic encephalopathy 1 (1)
Developmental and epileptic encephalopathy 9 (1)
Diffuse midline glioma (1)
Down syndrome (1)
Endometrial cancer (1)
Epilepsy (1)
Lung small cell carcinoma (1)
Mitochondrial metabolism disease (1)
Myopia (1)
Non-small cell lung carcinoma (1)
Obesity (1)
Ovary adenocarcinoma (1)
Pancreatic cancer (1)
Primary autosomal recessive microcephaly (1)

Technology Type

Mass Spectrometry (102)
Shotgun proteomics (57)
Mass spectrometry (37)
Affinity purification coupled with mass spectrometry proteomics (15)
Gel-based experiment (15)
Bottom-up proteomics (14)
Data-dependent acquisition (8)
Data-independent acquisition (6)
NMR spectroscopy (4)
Mass spectrometry assay (4)
SWATH MS (3)
Top-down proteomics (3)
NMR spectroscopy assay (1)
Affinity proteomics (1)
MSE (1)
Proteogenomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (15)
Liquid Chromatography MS - negative - reverse phase (11)
Q Exactive (6)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (4)
Liquid Chromatography MS - negative - hilic (4)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (3)
Liquid Chromatography MS - positive - hilic (3)
Axon GenePix 4000B scanning hardware (2)
LTQ FT (2)
Gas Chromatography MS - (2)
Nuclear Magnetic Resonance (NMR) (2)
Direct infusion MS - positive (2)
5975C Series GC/MSD (Agilent) (2)
Nuclear Magnetic Resonance (NMR) - (2)
Liquid Chromatography MS - alternating - hilic (2)
Axon Instruments GenePix 4000B scanner (1)
GeneChip 3000 7G scanner (Affymetrix) (1)
GentleMACS Dissociator with M tubes (Miltenyi Biotec), QIAzol Lysis Reagent (Qiagen), and RNeasy Microarray Tissue Mini Kit with optional DNase treatment (Qiagen) (1)
Hybridization Cocktails, Mouse Transcriptome 1.0 ST GeneChips, GeneChip Hybridization oven 645 (all Affymetrix) (1)
Bioanalyzer (Agilent), Nanodrop (Thermo Fisher Scientific), and Affymetrix WT Plus Reagent Kit (1)
Other (1)
NextSeq 550 (1)
Illumina HiSeq 2500 (1)
6530A Q-TOF LC/MS (1)
TimsTOF Pro 2 (1)
Various (1)
Xevo G2-S QTof (1)
Liquid Chromatography Tandem MS (LC-MS/MS (Negative)) (1)
Liquid Chromatography Tandem MS (LC-MS/MS (Positive)) (1)
ACQUITY TQD (Waters) (1)

Publication Date

2023 (24)
2022 (21)
2024 (20)
2021 (19)
2025 (18)
2018 (12)
2015 (11)
2014 (10)
2011 (10)
2026 (10)
2020 (9)
2019 (9)
2013 (8)
2012 (7)
2010 (7)
2009 (7)
2008 (6)
2007 (6)
2016 (5)
2006 (4)
2005 (3)
2017 (3)

CHEBI ID

CHEBI:15741 (19)
CHEBI:15891 (19)
CHEBI:18012 (19)
CHEBI:15354 (18)
CHEBI:18237 (16)
CHEBI:16811 (16)
CHEBI:15428 (16)
CHEBI:27897 (16)
CHEBI:17368 (16)
CHEBI:30769 (16)
CHEBI:25094 (15)
CHEBI:22660 (15)
CHEBI:18186 (15)
CHEBI:28044 (15)
CHEBI:17154 (15)
CHEBI:27266 (15)
CHEBI:16449 (15)
CHEBI:32816 (15)
CHEBI:16737 (15)
CHEBI:16919 (15)
CHEBI:17596 (15)
CHEBI:17822 (14)
CHEBI:26986 (14)
CHEBI:28300 (14)
CHEBI:24898 (14)
CHEBI:17568 (14)
CHEBI:16027 (14)
CHEBI:30915 (14)
CHEBI:18257 (13)
CHEBI:25017 (13)

Metabolite Name

Isoleucine (10)
Creatinine (10)
AMP (9)
Choline (9)
Taurine (9)
Lysine (9)
Phenylalanine (9)
Creatine (9)
Inosine (9)
Valine (8)
Methionine (8)
Tyrosine (8)
Threonine (8)
Glutamine (8)
Uric acid (8)
Glutamate (7)
Leucine (7)
CMP (7)
ADP (7)
Kynurenic acid (7)
Serine (7)
Alanine (7)
Succinate (7)
Linoleic acid (7)
Hypoxanthine (7)
Glycine (6)
Tryptophan (6)
Taurine (6)
Serine (6)
Proline (6)

Study type

Transcription profiling by array (43)
RNA-seq of coding RNA (8)
Proteomic profiling by array (5)
Other (4)
Comparative genomic hybridization by array (3)
Methylation profiling by high throughput sequencing (2)
Unknown experiment type (1)
ChIP-chip by array (1)
Genotyping by array (1)
Antigen profiling (1)
ATAC-seq (1)
ChIP-seq (1)
RNA-seq of total RNA (1)

Release Date

2021 (175)
2023 (145)
2022 (144)
2024 (114)
2025 (112)
2020 (101)
2019 (93)
2018 (74)
2015 (71)
2017 (67)
2014 (65)
2016 (54)
2013 (52)
2012 (51)
2011 (37)
2010 (35)
2026 (20)
2008 (16)
2009 (15)
2007 (10)
2006 (9)
2005 (7)
2004 (1)
2003 (1)
2001 (1)

Lab affiliation

Department of Molecular Biology and Biotechnology, The University of Sheffield, UK. (2)
School of Biosciences, University of Sheffield (2)
Section of Paediatric Infectious Diseases, Faculty of Medicine, Imperial College London, UK (2)
1. Cancer Signalling Research Group, School of Biomedical Sciences and Pharmacy, College of Health, Medicine and Wellbeing, University of Newcastle, Callaghan, NSW, AUSTRALIA 2. Precision Medicine Research Program, Hunter Medical Research Institute, New Lambton Heights, NSW, AUSTRALIA 3. Paediatric Program, Mark Hughes Foundation Centre for Brain Cancer Research, College of Health, Medicine, and Wellbeing, Callaghan, NSW, AUSTRALIA (1)
1School of Biomedical Sciences and Pharmacy, College of Health, Medicine and Wellbeing, University of Newcastle, NSW, 2308, Australia 2 Precision Medicine Research Program, Hunter Medical Research Institute, New Lambton Heights, NSW, 2305, Australia (1)
Baxter Laboratory for Stem Cell Biology Department of Microbiology & Immunology Stanford University School of Medicine (1)
Baxter Laboratory for Stem Cell Biology Department of Microbiology & Immunology Stanford University School of Medicine 269 Campus Drive CCSR 3205b Stanford, CA 94305-5175 (1)
Bernstein Professor Emeritus in Adult Psychiatry Department of Psychiatry and Behavioral Sciences University of Minnesota Medical School (1)
Boston University School of Medicine (1)
Calico Life Sciences (1)
Center for Proteomics & Artificial Intelligence Center for Clinical Mass Spectrometry Allegheny Health Network Cancer Institute 100 S Jackson Ave., Pittsburgh, PA 15202 (1)
Centre Algatech, Institute of Microbiology, Academy of Sciences of the Czech Republic, 6 Novohradská 237, Třeboň, 379 81, Czech Republic (1)
Centre Algatech, Institute of Microbiology, Academy of Sciences of the Czech Republic, Třeboň,CZ. (1)
Committee on Cancer Biology, The University of Chicago, Chicago, IL, USA Department of Pathology, The University of Chicago, Chicago, IL, USA Department of Pediatrics, The University of Chicago, Chicago, IL, USA The University of Chicago Medicine Comprehensive Cancer Center, University of Chicago, Chicago, IL, USA (1)
Complex Carbohydrate Research Center, University of Georgia, Athens, GA, USA (1)
DZNE Munich, Neuroproteomics, Feodor-Lynen-Str. 17, 81377 München, Germany (1)
David Geffen School of Medicine, UCLA, USA BD2K Center of Excellence for Big Data Computing at UCLA, UCLA, USA (1)
Department of Anesthesiology & Perioperative Medicine, Oregon Health & Science University, 3181 SW Sam Jackson Park Road, Portland, OR 97239, USA (1)
Department of Biochemistry and Microbiology, L-Probe Lab Ghent University (1)
Department of Biochemistry and Pharmacology, The University of Melbourne, Parkville, Victoria, 3052, Australia (1)
Department of Biological Sciences University of Delaware Newark, DE, USA. (1)
Department of Biological Sciences, University of North Carolina at Charlotte, Charlotte, USA. (1)
Department of Biological SciencesUniversity of North Carolina CharlotteCharlotteUSA (1)
Department of Biology, Plant ecophysiology lab, ADepartment of Biological Sciences, University of Cape Town, Private Bag X3, Rondebosch 7701, South Africa (1)
Department of Chemical Physiology and Biochemistry Oregon Health & Science University 3181 SW Sam Jackson Park Road Portland, Oregon 97239, USA (1)
Department of Chemistry, University of Kansas, Lawrence, KS, United States (1)
Department of Infection Biology, Institute of Infection and Global Health, University of Liverpool (1)
Department of Medicine, Harvard Medical School, Boston, MA 02115, USA. Department of Cancer Biology, Department of Medical Oncology, Dana Farber Cancer Institute, Boston, MA 02115, USA. (1)
Department of Microbiology and Immunology and Biomedical Instrumentation Center, Uniformed Services University of the Health Sciences, Bethesda, Maryland, 20814 (1)
Department of Microbiology and Immunology, University of Mississippi Medical Center, Jackson, Mississippi, United States of America (1)