Jay M M - OmicsDI

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Unknown (591)
Transcriptomics (236)
Genomics (59)
Proteomics (39)
Metabolomics (9)
Genomic (3)

Organisms

Homo sapiens (149)
Mus musculus (65)
Rattus norvegicus (21)
Saccharomyces cerevisiae (10)
Arabidopsis thaliana (10)
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 (9)
Drosophila melanogaster (9)
Caenorhabditis elegans (6)
Salmonella enterica subsp. enterica serovar Typhimurium (5)
Escherichia coli (5)
Mus musculus x Mus spretus (4)
Danio rerio (4)
Neurospora crassa (3)
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (2)
Salmonella enterica (2)
Zea mays (2)
Pseudomonas putida KT2440 (2)
Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74 (1)
Blastocladiella emersonii (1)
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Escherichia coli BW25113 (1)
Sulfolobus acidocaldarius DSM 639 (1)
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Rhodotorula toruloides (1)
Antheraea mylitta (1)
Ixodes scapularis (1)

Organisms

Homo sapiens (1)

Repository

biostudies-arrayexpress (273)
EGA (24)
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pride (14)
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dbGaP (3)
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Tissue

Cell culture (5)
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Saliva-secreting gland (1)
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Disease

Normal (4)
Neuroblastoma (2)
Extra-adrenal sympathetic paraganglioma (1)
Embryonic lethal at day 8.5 to 9.5 (1)
Lung large cell carcinoma (1)
Multiple congenital malformation (1)
Burkitt lymphoma (1)
Adenoid cystic carcinoma (1)
Reference (1)
Non-small cell lung carcinoma (1)
Adenocarcinoma (1)
Central nervous system cancer (1)
Breast cancer (1)
Osteoarthritis (1)
Osteosarcoma (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (14)
Shotgun proteomics (6)
Mass spectrometry (5)
Gel-based experiment (5)
Bottom-up proteomics (4)
Affinity purification coupled with mass spectrometry proteomics (3)
Mass spectrometry assay (2)
Data-dependent acquisition (2)
Illumina HiSeq 2000 (1)
Illumina HiSeq 2000, Affymetrics_SNP_6.0-, Illumina Genome Analyzer IIx (1)
Illumina HiSeq 2500, ILLUMINA (1)
Illumina HiSeq 2500, Illumina HiSeq 2000 (1)
NMR spectroscopy (1)

Instrument Platform

NextSeq 500 (5)
LTQ (5)
Illumina NovaSeq 6000 (4)
Orbitrap Fusion Lumos (4)
Axon GenePix 4000B scanning hardware (3)
Illumina HiSeq 2500 (2)
Q Exactive HF-X (2)
Q Exactive (2)
Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
Qiagen RNAeasy, Bioanalyzer QubitFluorometer, Agilent 2100, RNA Pico 6000 chip (1)
Other (1)
Axon- GenePix4000B (1)
G2565BA DNA microarray scanner [Agilent] (1)
NextSeq 2000 (1)
DNBSEQ-G400 (1)
Illumina MiSeq (1)
Illumina HiSeq 2000 (1)
TSQ Quantum Ultra (1)
LTQ Orbitrap Elite (1)
LTQ Orbitrap Velos (1)
Orbitrap Exploris 480 (1)
Q Exactive HF (1)
Velos elite (1)
5975C Series GC/MSD (Agilent) (1)
Bruker (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid chromatography MS/MS - Negative (1)

Publication Date

2012 (44)
2015 (34)
2010 (30)
2014 (29)
2011 (29)
2016 (26)
2013 (26)
2008 (15)
2025 (12)
2009 (12)
2024 (8)
2021 (7)
2019 (7)
2022 (6)
2007 (5)
2006 (5)
2026 (4)
2023 (4)
2020 (4)
2018 (4)
2005 (4)
2017 (3)

CHEBI ID

CHEBI:15741 (2)
CHEBI:29042 (2)
CHEBI:30769 (2)
CHEBI:30915 (2)
CHEBI:32805 (2)
CHEBI:33508 (2)
CHEBI:6650 (2)
CHEBI:10093 (1)
CHEBI:10136 (1)
CHEBI:104120 (1)
CHEBI:10432 (1)
CHEBI:1148 (1)
CHEBI:123115 (1)
CHEBI:124990 (1)
CHEBI:131762 (1)
CHEBI:131924 (1)
CHEBI:132244 (1)
CHEBI:132966 (1)
CHEBI:135611 (1)
CHEBI:139369 (1)
CHEBI:139373 (1)
CHEBI:139374 (1)
CHEBI:139441 (1)
CHEBI:141435 (1)
CHEBI:142245 (1)
CHEBI:143076 (1)
CHEBI:14336 (1)
CHEBI:143726 (1)
CHEBI:14434 (1)
CHEBI:145052 (1)

Metabolite Name

(+)-Costunolide (1)
(S)-Dihydroorotate (1)
1,2-Cyclohexanedione (1)
1,4-Cyclohexanedicarboxylic Acid (1)
1,4-Cyclohexanedione (1)
1,5-Naphthalenediamine (1)
1-Aminocyclopropane-1-Carboxylate (1)
1-Heptadecanoyl-2-Hydroxy-Sn-Glycero-3-Phosphocholine (1)
1-Methyl-L-Histidine (1)
1-Palmitoyl-2-Hydroxy-Sn-Glycero-3-Phosphoethanolamine (1)
1-Pentadecanoyl-2-Hydroxy-Sn-Glycero-3-Phosphocholine (1)
1-Stearoyl-Sn-Glycero-3-Phosphocholine (1)
11.29 393 257 217 (1)
11.29 397 425 471 (1)
11.77 287 285 (1)
12-Cytisineacetamide (1)
12.62 539 449 359 217 (1)
16.20 456 297 355 (1)
16.26 456 297 355 (1)
17Alpha-Methyltestosterone (1)
2',2'-Difluoro-2'-Deoxyuridine (1)
2',4'-Dihydroxyacetophenone (1)
2,3-Butanediol (1)
2,4,6-Tris(Allyloxy)-1,3,5-Triazine (1)
2,4-Dichlorophenol (1)
2,6-Di-Tert-Butyl-1,4-Benzoquinone (1)
2-Aminoacetophenone (1)
2-Aminocaprylic Acid (1)
2-Aminophenol (1)
2-Hydroxycinnamic Acid, Predominantly Trans (1)

First Public Date

2018 (1)

Study type

Transcription profiling by array (147)
RNA-seq of coding RNA (30)
ChIP-seq (23)
Comparative genomic hybridization by array (13)
Methylation profiling by high throughput sequencing (10)
ChIP-chip by tiling array (7)
Other (7)
ChIP-chip by array (6)
Methylation profiling by array (6)
RNA-seq of non coding RNA (4)
Unknown experiment type (3)
Transcription profiling by tiling array (3)
Animal - High-throughput sequencing (2)
RNA-seq of total RNA (2)
Transcription profiling by SAGE (1)
High-throughput sequencing (1)
Cell line - High-throughput sequencing (1)
RNAi profiling by array (1)
MicroRNA profiling by array (1)
DNA-seq (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2023 (69)
2015 (66)
2021 (64)
2025 (62)
2012 (60)
2014 (57)
2022 (54)
2020 (52)
2016 (48)
2013 (48)
2010 (43)
2024 (42)
2019 (38)
2011 (35)
2018 (27)
2008 (24)
2009 (22)
2017 (18)
2026 (10)
2007 (8)
2006 (7)
2005 (7)
2004 (1)
1998 (1)
1997 (1)

Lab affiliation

Division of Biochemistry, C.S. Bond Life Sciences Center, University of Missouri, Columbia, MO, USA (2)
Aging Institute Department of Cell Biology University of Pittsburgh School of Medicine/UPMC Bridgeside Point I Room 457 100 Technology Dr. Pittsburgh, PA 15219 (1)
Aging Institute of UPMC Department of Cell Biology University of Pittsburgh School of Medicine Bridgeside Point I Room 457 100 Technology Dr. Pittsburgh, PA 15219 (1)
Assistant Professor Aging Institute Department of Cell Biology University of Pittsburgh School of Medicine/UPMC Bridgeside Point I Room 457 100 Technology Dr. Pittsburgh, PA 15219 (1)
Biotechnology Division, Central Tasar Research and Training Institute,Piska Nagri Ranchi-835303, Jharkhand, India (1)
Department of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461, USA (1)
Department of Microbiology and Immunology University of Maryland School of Medicine USA (1)
McCaig institute for Bone and Joint Health, Cumming School of Medicine, University of Calgary, AB, Canada (1)
Montpellier Institute of Molecular Genetics, IGMM, CNRS UMR 5535, 34293 Montpellier, France University of Montpellier, Faculty of Sciences, 34095 Montpellier, France (1)
Professor, University of Missouri-Columbia, Department of Biochemistry, 271G Life Sciences Center, Columbia, MO 65211, USA (1)
University of Pittsburgh (1)
University of oxford (1)
Yale University Chemistry Department (1)

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The complete mitochondrial genome of Mya japonica (Jay, 1857 Myida:myidae).

Not available

S-EPMC11302462 | biostudies-literature

A highly contiguous reference genome for the Steller's jay (Cyanocitta stelleri).

Not available

S-EPMC10445514 | biostudies-literature

"We get support now …": a mixed methods study of patients' experiences of healthcare under the national health insurance scheme (PM-JAY) in India.

Not available

S-EPMC12661883 | biostudies-literature

De novo assembly of a chromosome-level reference genome for the California Scrub-Jay, Aphelocoma californica.

Not available

S-EPMC10650945 | biostudies-literature

Experiences and challenges in accessing hospitalization in a government-funded health insurance scheme: Evidence from early implementation of Pradhan Mantri Jan Aarogya Yojana (PM-JAY) in India.

Not available

S-EPMC9098065 | biostudies-literature

expression profiling data of CLB-GA neuroblastoma cells upon TAE-684, Crizotinib, X-396, LDK378, Trametinib, BEZ-235 and Vandetanib

Treatment of the CLB-GA cell line with complementary ALK, MEK, PI3K/mTOR or RET inhibitors (and DMSO (VWR) as control) was performed in duplicate for each drug using the GI50 concentrations (see further): 0.5M-k_M Crizotinib (Pfizer/Sigma-Aldrich); 0.06M-k_M X-396 (VWR); 0.2M-k_M LDK378 (Hoelzel Bio...

ORGANISM(S): homo sapiens

2015-05-04 | E-MTAB-3206 | biostudies-arrayexpress

mRNA expression profiles of SK-N-AS neuroblastoma cells with induced ALK-wt, ALK-F1174L or ALK-R1275Q

Establishment of inducible SK-N-AS ALKwt, ALKF1174L and ALKR1275Q cell lines Human neuroblastoma SK-N-AS cells were electroporated with pcDNA6/TR (Invitrogen) using the NeonM-eM-( Transfection System (Life Techologies). Single cell clones were generated using blasticidin (7.5M-eM-5g/ml) and limited ...

ORGANISM(S): homo sapiens

2015-05-04 | E-MTAB-3207 | biostudies-arrayexpress

Diversity and function of methyl-coenzyme M reductase-encoding archaea in Yellowstone hot springs revealed by metagenomics and mesocosm experiments.

Not available

S-EPMC10033731 | biostudies-literature

Longitudinal metabolomics and lipidomics analyses reveal markers of envenoming by Bothrops asper and Daboia russelii in an experimental murine model

Longitudinal metabolomics and lipidomics analysis was carried out in the blood plasma of mice injected intramuscularly with venoms of the viperid species Bothrops asper and Daboia russelii. Blood samples were collected 1, 3, 6 and 24 h after venom injection, and a control group ...

2022-09-21 | MTBLS5430 | MetaboLights

A case report of an Eurasian jay (Garrulus glandarius) attacking an incubating adult and depredating the eggs of the Japanese tit (Parus minor).

Not available

S-EPMC10040723 | biostudies-literature

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