Jensen Line L - OmicsDI

Show results for

Unknown (101)
Transcriptomics (55)
Proteomics (42)
Genomics (9)
Multiomics (3)
Metabolomics (3)

Organisms

Schizophyllum commune H4-8 (36)
Mycobacterium tuberculosis SP7 (36)
Oryza sativa Japonica Group (36)
Crotalus durissus terrificus (36)
Eriocheir sinensis (36)
Candidatus Endoriftia persephonae (36)
Mycobacterium tuberculosis SP10 (36)
Mycobacterium tuberculosis SP13 (36)
Cotesia typhae (36)
Mycobacterium tuberculosis SP22 (36)
Enterobacter ludwigii (36)
Corynebacterium diphtheriae bv. mitis str. ISS 3319 (36)
Chlamydomonas reinhardtii (36)
Lama (36)
Homo sapiens (34)
Mus musculus (9)
Plasmodium falciparum (4)
Caenorhabditis elegans (3)
Plasmodium falciparum Dd2 (2)
Escherichia coli UTI89 (2)
Rattus norvegicus (2)
Sus scrofa (2)
Trypanosoma brucei (1)
Glycine max (1)
Escherichia coli (1)
Gallus gallus (1)
Saccharomyces cerevisiae (1)
Drosophila melanogaster (1)
Arabidopsis thaliana (1)
cellular organisms (1)

Repository

biostudies-arrayexpress (60)
pride (36)
EGA (4)
MassIVE (4)
LINCS (3)
MetaboLights (3)
jPOST (1)
PanoramaPublic (1)

Tissue

Cell culture (14)
Permanent cell line cell (9)
Sperm (3)
Brain (3)
Spermatozoon (2)
Leukocyte (2)
Cell suspension culture (2)
Testis (2)
Hepatocyte (2)
Lung (2)
Kidney (2)
Blood (2)
Spermary (1)
Brain cancer cell line (1)
Kidney cancer cell (1)
Renal cancer cell line (1)
Skin cancer cell (1)
Cecum cancer cell line (1)
Liver cancer cell (1)
Blood cancer cell (1)
Cervical cancer cell line (1)
Prostate cancer cell (1)
Ovary cancer cell line (1)
Ovary cancer cell (1)
Bone cancer cell line (1)
Acute myeloid leukemia cell (1)
Colonic cancer cell (1)
Breast cancer cell (1)
Colorectal cancer cell line (1)
Prostate cancer cell line (1)

Disease

Infertility (4)
Breast cancer (3)
Disease free (2)
Colon cancer (2)
Acute leukemia (2)
Post-stasis (1)
Gliosarcoma (1)
Infiltrating ductal carcinoma (1)
Normal (1)
Tauopathy (1)
Lung adenocarcinoma (1)
Prostate adenocarcinoma (1)
Parkinson's disease (1)
Malignant neoplasm of ovary (1)

Technology Type

Mass Spectrometry (36)
Shotgun proteomics (15)
Affinity purification coupled with mass spectrometry proteomics (7)
SWATH MS (6)
Bottom-up proteomics (6)
Data-independent acquisition (5)
Gel-based experiment (4)
ELISA (3)
Chemiluminescence (3)
Data-dependent acquisition (3)
Mass spectrometry (2)
Illumina HiSeq 2000 (1)
Mass spectrometry assay (1)
Sodium dodecyl sulfate polyacrylamide gel electrophoresis (1)
DiaPASEF (1)
SRM/MRM (1)

Instrument Platform

NextSeq 500 (4)
Q Exactive (3)
Illumina HiSeq 2000 (2)
Illumina HiSeq 4000 (2)
DNBSEQ G40 (1)
Flow Chamber infection model (1)
Agilent scanner (1)
GenePix 4000A [Axon Instruments] (1)
GenePix 4000B [Axon Instruments] (1)
DNBSEQ-G400 (1)
Illumina HiSeq 1500 (1)
Illumina NovaSeq 6000 (1)
LTQ (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2013 (12)
2015 (11)
2011 (9)
2020 (8)
2026 (7)
2022 (6)
2021 (6)
2017 (6)
2023 (6)
2016 (5)
2014 (5)
2010 (4)
2024 (4)
2018 (3)
2008 (3)
2025 (3)
2009 (2)
2007 (2)
2019 (2)
2012 (1)
2006 (1)
2005 (1)

CHEBI ID

CHEBI:181874 (1)
CHEBI:195267 (1)
CHEBI:195266 (1)
CHEBI:182784 (1)
CHEBI:195268 (1)
CHEBI:44237 (1)
CHEBI:171846 (1)
CHEBI:167961 (1)
CHEBI:173138 (1)
CHEBI:143757 (1)
CHEBI:166710 (1)
CHEBI:16312 (1)
CHEBI:35038 (1)
CHEBI:26756 (1)
CHEBI:173703 (1)
CHEBI:68947 (1)
CHEBI:89234 (1)
CHEBI:59265 (1)
CHEBI:139138 (1)
CHEBI:35932 (1)
CHEBI:73025 (1)
CHEBI:27432 (1)
CHEBI:34494 (1)
CHEBI:16610 (1)
CHEBI:4676 (1)
CHEBI:15603 (1)
CHEBI:48430 (1)
CHEBI:28088 (1)
CHEBI:36378 (1)
CHEBI:16015 (1)

Metabolite Name

NCGC00168953-02_C47H76O17_(3beta,5xi,9xi,22beta)-22,24-Dihydroxyolean-12-en-3-yl 6-deoxy-alpha-L-mannopyranosyl-(1->2)-alpha-L-arabinopyranosyl-(1->2)-beta-D-glucopyranosiduronic acid (1)
Sodium taurochenodeoxycholate (1)
(R)-4-((3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-3,7,12-trihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
(R)-4-((3R,4R,5S,8S,9S,10R,13R,14S,17R)-3,4-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
3beta-Hydroxy-5-cholenoic acid (1)
Dihydroorotic acid (1)
O-isovalerylcarnitine (1)
O-propanoylcarnitine (1)
(Nω-L-arginino)succinic acid (1)
13-Keto-9Z,11E-octadecadienoic acid (1)
Pentapropylene glycol (1)
3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanic acid (1)
Heptapropylene glycol (1)
Delta-Undecalactone (1)
N-Butylbenzenesulfonamide (1)
Alpha-linolenic acid|linolenic acid|(9Z,12Z,15Z)-octadeca-9,12,15-trienoic acid (1)
3-methyl-2-oxovaleric acid (1)
Soyasaponin Ba (1)
NCGC00385123-01_C22H30O6_7b,9-Dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1,1a,1b,4,4a,5,7a,7b,8,9-decahydro-9aH-cyclopropa[3,4]benzo[1,2-e]azulen-9a-yl acetate (1)
(2S,3S,4S,5R,6R)-6-[[(3S,4S,6aR,6bS,8aR,9R,12aS,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid (1)
Chenodeoxycholic acid (1)
Cholic acid (1)
N-carbamoyl-L-aspartic acid (1)
4-methyl-2-oxopentanoic acid (1)
Uridine 5'-monophosphate (1)
Aspartic acid (1)
Tauroursodeoxycholic acid (1)
Taurohyodeoxycholic acid (1)
Tris(2-butoxyethyl) phosphate (1)
Palmitelaidic acid (1)

Modification

N6 (1)
N6-dimethyl-L-lysine (1)

Study type

Transcription profiling by array (30)
RNA-seq of coding RNA (5)
ChIP-chip by tiling array (3)
Cell line - High-throughput sequencing (3)
ChIP-seq (3)
Transcription profiling by tiling array (2)
Comparative genomic hybridization by array (2)
Methylation profiling by array (2)
RNA-seq of coding RNA from single cells (2)
Cell line - Single-cell sequencing (1)
ChIP-chip by array (1)
RIP-seq (1)
Other (1)
MicroRNA profiling by array (1)
DNA-seq (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of non coding RNA (1)

Release Date

2013 (15)
2022 (14)
2021 (12)
2015 (12)
2025 (12)
2024 (12)
2011 (11)
2020 (8)
2016 (8)
2010 (8)
2023 (8)
2014 (7)
2018 (6)
2017 (6)
2019 (5)
2009 (4)
2008 (4)
2026 (3)
2012 (2)
2007 (2)
2006 (1)
2005 (1)

Lab affiliation

Institute of Functional Epigenetics, Helmholtz Zentrum München, 85764 Neuherberg, Germany (3)
Instituto de Ciencia y Tecnologia Animal Universitat Politècnica de València Valencia, Spain (2)
Hans Merensky Chair in Avocado Research, Department of Biochemistry, Genetics and Microbiology, Faculty of Natural and Agricultural Sciences, Forestry and Agricultural Biotechnology Institute, University of Pretoria, Pretoria 0028, South Africa (1)
Department of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA (1)
Yale Cancer Biology Institute, Department of Pharmacology, Yale University School of Medicine (1)
Novo Nordisk Foundation Center for Protein Research, Department of Cellular and Molecular Medicine, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark (1)
Centro de Investigación Príncipe Felipe, Av. Eduardo Primo Yúfera 3, 46012 Valencia, Spain (1)
Instituto de Ciencia y Tecnologia Animal Iniversitat Politecnica de Valencia (UPV) Valencia, Spain (1)
Instituto de Ciencia y Tecnologia Animal Universitat Politècnica de València (UPV) Valencia (Spain) (1)
Novo Nordisk Foundation Center for Protein Research, Faculty of Health & Medical Sciences, University of Copenhagen Blegdamsvej 3B, DK-2200 Copenhagen N, Denmark (1)
European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI) (1)
Department of Urology, Department of Biochemistry and Molecular Biology, Cancer Research Institute, SUNY Upstate Medical University, 750 E. Adams St., Syracuse, NY 13210, USA (1)
Proteomics program, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen Current affiliation: Evosep Aps, Denmark (1)
Cornell University Department of Microbiology (1)
vo Nordisk Foundation Center for Protein Research, University of Copenhagen, Denmark (1)
Lab of Proteome Research, Department of Molecular Biology and Genetics, Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow, Russia (1)
Clinical Neuroproteomics Unit Navarrabiomed Proteored-ISCIII Pamplona-Spain (1)
Institute of Immunology and Infection Research, School of Biological Sciences, University of Edinburgh, UK (1)
The Novo Nordisk Foundation Center for Protein Research, Faculty of Health Sciences, University of Copenhagen, Dept. of Proteomics and Cell Signaling (1)
The Epi-/Genome Lab, Department of Hematology, Rigshospitalet, Ole Maaløes Vej 5, 2200 Copenhagen, Denmark (1)
Novo Nordisk Foundation Center for Protein Research (1)
Department of Urology, Department of Biochemistry and Molecular Biology, Cancer Research Institute, SUNY Upstate Medical University, 750 E. Adams St., Syracuse, NY 13210, USA (1)
University Grenoble Alpes, CEA, INSERM, UA13 BGE, CNRS, CEA, Grenoble, France (1)
Department of Proteomics, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, 2200 Copenhagen, Denmark (1)
Department of Functional Genomics, Interfaculty Institute for Genetics and Functional Genomics, University Medicine Greifswald, Greifswald, Germany (1)
Professor Anthony W Purcell Deputy Head (Research), Department of Biochemistry and Molecular Biology Head Immunoproteomics Laboratory Monash University, Clayton Campus Clayton 3800 Victoria Australia (1)
Department of Chemistry, Lomonosov Moscow State University, Leninskye Gory 1, 119991 Moscow, Russia (1)
Children's Hospital of Philadelphia (1)
Department of Biochemistry and Molecular Biology, Protein Research group, University of Southern Denmark, Odense, Denmark (1)
Mass Spectrometry & Proteomics Core Facility (MSPCF) Institute for Research in Biomedicine (IRB Barcelona) Barcelona Institute of Science and Technology (BIST) C/ Baldiri Reixac, 10-12 08028 Barcelona - Spain. (1)

Previous page
1 / 22
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 22
Next page

Sort by:

Relevance

Page size

Transcription profiling of jejunum from chickens with either a high or low natural antibody response which were fed an organic or conventially produced diet

ISA Brown Warren medium heavy layer hens were divergently selected for 25 generations on their primary immune response. Two selection chicken lines were established: chickens with a high natural antibody response (H) and chicken with a low natural antibody response (L). Besides a control line of ran...

ORGANISM(S): Gallus gallus

2010-03-02 | E-MEXP-1798 | biostudies-arrayexpress

The Potential Role of Alu Y in the Development of Resistance to SN38 (Irinotecan) or Oxaliplatin in Colorectal Cancer

Purpose: Irinotecan (SN38) and oxaliplatin are chemotherapeutic agents used in the treatment of colorectal cancer. However, the frequent development of resistance to these drugs represents a considerable challenge in the clinic. Alus as retrotransposons comprise 11% of the human genome. Genomic toxi...

ORGANISM(S): Homo sapiens

2015-04-01 | E-GEOD-56269 | biostudies-arrayexpress

Expression data from oligodendroglial cell line

Coexpression of alpha-synuclein and p25alpha in an oligodendroglial cell line elicites a degenerative response that relies on aggregation and phosphorylation of alpha-synuclein at Ser129 We used microarray analysis to detail the changes in gene expression caused by alpha-synuclein aggregation follow...

ORGANISM(S): Rattus norvegicus

2013-10-28 | E-GEOD-51781 | biostudies-arrayexpress

Inhibition of miR-9 regulates HuR and DICER1 and blocks Hodgkin Lymphoma tumor outgrowth

An Hodgkin Lymphoma cell line have been treated with an LNA inhibitor for miR-9 or with a scramble LNA to identify miR-9 regulated pathways that could be important for Hodgkin Lymphoma pathogenesis. L428 cells were transfected with a miR-9 LNA inhibitor or a scrambled LNA. Total RNA was harvested 9 ...

ORGANISM(S): Homo sapiens

2012-05-01 | E-GEOD-27529 | biostudies-arrayexpress

Evaluation by re-derivation of a paternal line after 18th generations on seminal traits, proteome and fertility: Seminal Plasma Spectral Library

Breeding schemes for meat production in rabbits involved a three-way cross of specialized lines in which a paternal line inseminates maternal crossbred females. Paternal line or terminal sire are selected for growth traits, being the males used for the production of fertile dose at the insemination ...

ORGANISM(S): Oryctolagus cuniculus (Rabbit)

2020-01-13 | PXD015511 | Pride

Evaluation by re-derivation of a paternal line after 18th generations on seminal traits, proteome and fertility: spermatozoon membrane proteins Spectral Library

ORGANISM(S): Oryctolagus cuniculus cuniculus

2020-01-13 | PXD015510 | Pride

Dia-lc/msms Fertility Swath Spermatozoon membrane protein

Proteomic profiling of extracellular vesicles of the Lactiplantibacillus plantarum strains

The study was conducted on a model of Lactiplantibacillus plantarum, one of the most studied species widely used in the food industry as a probiotic microorganism and/or microbial starter culture. As a result of step-by-step selection from the L. plantarum 8p-a3 strain isolated from the «Lactobacter...

ORGANISM(S): Cellular Organisms

2023-11-01 | PXD046569 | JPOST Repository

The Human Cell Line Phosphoproteome Atlas: A Deep Empirical Resource Revealing Kinase Activity Landscapes

Protein phosphorylation orchestrates cellular signaling and controls diverse biological processes, with dysregulation driving disease, notably cancer. Comprehensive, high-throughput phosphoproteomics remains limited by detection sensitivity, data completeness, and computational bottlenecks, especial...

ORGANISM(S): Homo sapiens (Human)

2026-08-03 | PXD068583 | Pride

De novo piRNA cluster formation in the Drosophila germline triggered by transgenes containing a transcribed transposon fragment

PIWI interacting RNAs (piRNAs) provide defense against transposable element (TE) expansion in the germline of metazoans. piRNAs are processed from the transcripts encoded by specialized heterochromatic clusters enriched in damaged copies of transposons. How these regions are recognized as a source o...

ORGANISM(S): Drosophila melanogaster

2013-04-25 | E-GEOD-41780 | biostudies-arrayexpress

Inter-Strain Differences in LINE-1 DNA Methylation in the Mouse Hematopoietic System in Response to Exposure to Ionizing Radiation.

Not available

S-EPMC5535921 | biostudies-literature

Previous page
1 / 22
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 22
Next page