Jiang Ya Y - OmicsDI

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Unknown (121)
Transcriptomics (11)
Proteomics (5)
Genomics (2)
Metabolomics (2)

Organisms

Homo sapiens (5)
Mus musculus (4)
Caenorhabditis elegans (3)
Drosophila mojavensis (1)
Lotus japonicus (1)
Drosophila melanogaster (1)
Carassius gibelio (1)
Fragaria vesca (1)
Alphavirus (1)
Anemia (1)
Archaea (1)
Bacteria (1)
Betaherpesvirinae (1)
Borrelia (1)
Chlamydomonas reinhardtii (1)
Chlorella vulgaris (1)
Clostridium perfringens (1)
Dengue virus (1)
Eukaryota (1)
Hepatitis B virus (1)
Human alphaherpesvirus 1 (1)
Human betaherpesvirus 5 (1)
Influenza A virus (1)
Influenza C virus (1)
Japanese encephalitis virus group (1)
Kamptonema sp. (1)
Listeria monocytogenes (1)
Mammarenavirus (1)
Miscanthus x giganteus (1)
Mycobacterium tuberculosis (1)

Repository

biostudies-arrayexpress (12)
iProX (4)
MetaboLights (2)
EGA (1)
pride (1)

Tissue

Cell culture (1)
Epithelial cell (1)

Disease

Lysosomal storage disease (1)

Technology Type

Mass spectrometry (2)
Data-dependent acquisition (1)
Mass Spectrometry (1)

Instrument Platform

Illumina Genome Analyzer (2)
Illumina Genome Analyzer II (2)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2010 (4)
2012 (3)
2017 (2)
2006 (2)
2022 (2)
2025 (2)
2016 (1)
2015 (1)
2024 (1)
2023 (1)

CHEBI ID

CHEBI:1368 (1)
CHEBI:8185 (1)
CHEBI:167540 (1)
CHEBI:175931 (1)
CHEBI:132820 (1)
CHEBI:181036 (1)
CHEBI:75642 (1)
CHEBI:176884 (1)
CHEBI:49125 (1)
CHEBI:75098 (1)
CHEBI:175611 (1)
CHEBI:27522 (1)
CHEBI:132366 (1)
CHEBI:32491 (1)
CHEBI:80897 (1)
CHEBI:132821 (1)
CHEBI:114954 (1)
CHEBI:66287 (1)
CHEBI:27395 (1)
CHEBI:139424 (1)
CHEBI:69671 (1)
CHEBI:3461 (1)
CHEBI:134253 (1)
CHEBI:86904 (1)
CHEBI:175933 (1)
CHEBI:6373 (1)
CHEBI:64907 (1)
CHEBI:17527 (1)
CHEBI:75644 (1)
CHEBI:39 (1)

Metabolite Name

3,3',4-O-Trimethylellagic acid (1)
5,4'-Dihydroxy-3,6,7,3'-tetramethoxyflavone (1)
(-)-Epicatechin-3-(3''-O-methyl)gallate (1)
Physcion-8-O-glucoside (1)
1-O-Feruloyl-D-Glucose (1)
Juglone; 5-Hydroxy-1,4-naphthoquinone (1)
LysoPC 18:2 (2n isomer) (1)
Matairesinol-4'-O-glucoside (Matairesinoside) (1)
Arecatannin A1 (1)
1,2,3,6-Tetra-O-Galloyl-D-Glucose (1)
Chrysophanol-8-O-glucoside (1)
Cytidine 5'-monophosphate (Cytidylic acid) (1)
Scopoletin (7-Hydroxy-5-methoxycoumarin) (1)
3-Carbamyl-1-methylpyridinium (1-Methylnicotinamide) (1)
LysoPE 16:0 (2n isomer) (1)
LysoPC 18:0 (2n isomer) (1)
LysoPC 16:0 (2n isomer) (1)
Apigenin-7-O-glucoside (Cosmosiin) (1)
LysoPC 18:3 (2n isomer) (1)
LysoPE 18:1 (2n isomer) (1)
Avicularin (Quercetin-3-O-alpha-L-arabinofuranoside) (1)
D-Panose (1)
Betanin (Betanidin-5-O-glucoside) (1)
Kaempferol-3-O-robinoside-7-O-rhamnoside (Robinin) (1)
Fraxetin (7,8-Dihydroxy-6-methoxycoumarin) (1)
Sodium Valproate (1)
10-Heptadecenoic Acid (1)
2,5-Dihydroxybenzoic acid; Gentisic Acid (1)
Naringenin-7-O-Neohesperidoside (Naringin) (1)
Quercetin-3-O-rhamnoside (Quercitrin) (1)

Study type

Transcription profiling by array (6)
Unknown experiment type (2)
RNA-seq of coding RNA (2)
ChIP-chip by array (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2016 (16)
2025 (16)
2024 (10)
2021 (10)
2020 (10)
2015 (9)
2023 (9)
2017 (8)
2014 (8)
2012 (6)
2026 (6)
2010 (5)
2022 (5)
2019 (4)
2013 (4)
2018 (3)
2006 (2)
2011 (2)

Lab affiliation

Department of Cell Biology, Harvard Medical School, Boston MA, USA (1)

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Transcriptome profiling for wild-type, single and double mutants for Nuclear Factor YA1 (nf-ya1) and hypernodulation phenotype (har1) mutants in roots of Lotus japonicus

Acting in a partially redundant manner, NF-Ys were shown previously to regulate bacterial infection, including selection of a superior rhizobial strain, and to participate in mediating nodule structure formation. However, the exact mechanism(s) by which these transcriptional factors exert their symb...

ORGANISM(S): Lotus japonicus

2017-05-03 | E-MTAB-4970 | biostudies-arrayexpress

CDCA8 induced by NF-YA promotes hepatocellular carcinoma progression by regulating the MEK/ERK pathway.

Not available

S-EPMC9838039 | biostudies-literature

The Manchurian Walnut Genome: Insights into Juglone and Lipid Biosynthesis

BACKGROUND: Manchurian walnut (Juglans mandshurica Maxim.) is a tree with multiple industrial uses and medicinal properties in the Juglandaceae family (walnuts and hickories). J. mandshurica produces juglone, which is a toxic allelopathic agent and has potential utilization value...

2022-05-18 | MTBLS3657 | MetaboLights

Common variants in TGFBR2 and miR-518 genes are associated with hypertension in the Chinese population.

Not available

S-EPMC4815702 | biostudies-literature

gga-miR-449b-5p Regulates Steroid Hormone Synthesis in Laying Hen Ovarian Granulosa Cells by Targeting the IGF2BP3 Gene.

Not available

S-EPMC9559480 | biostudies-literature

Alkaline ceramidase 2 is essential for the homeostasis of plasma sphingoid bases and their phosphates.

Not available

S-EPMC5956249 | biostudies-literature

A novel MYOC heterozygous mutation identified in a Chinese Uygur pedigree with primary open-angle glaucoma.

Not available