Sort   by:  
 Page size 
TranscriptomicsArabidopsis thaliana strain:Landsberg erecta Transcriptome or Gene expression
To study cell type-specific gene expression in the leaf boundary region in the genome scale, we employed the TRAP-seq approach recently implemented. In brief, we introduced a reporter line carrying the fusion of the large subunit ribosomal protein L18 with N-terminal His and FLAG epitope tags (HF-RP...
ORGANISM(S): Arabidopsis thaliana 
2015-02-07 | E-MTAB-4423 | biostudies-arrayexpress
TranscriptomicsA transcriptome atlas of rice cell types uncovers cellular, functional and developmental hierarchies
Whole-genome transcriptional profiles of rice cell types, isolated by laser-capture microdissection. The first comprehensive multi-organ cell type transcriptome atlas from a plant, with 40 distinct cell types from several developmental stages of seeds, shoots and roots, reveals cell-specific promote...
ORGANISM(S): Oryza sativa 
2010-05-19 | E-GEOD-13161 | biostudies-arrayexpress
TranscriptomicsDecapped mRNAs during Arabidopsis Early Flower Development
The composition of the transcriptome is regulated by both mRNA synthesis and degradation. One route for mRNA decay is through 5’ decapping, which can be initiated by decapping enzymes and small RNAs. Although decapped RNAs are an important intermediate for mRNA decay, their identity and abundance ...
ORGANISM(S): Arabidopsis thaliana 
2008-10-10 | E-GEOD-12043 | biostudies-arrayexpress
TranscriptomicsComparison analysis of rice and Arabidopsis photomorphogenesis
Long oligonucleotide microarrays were used for the study of expression profile changes during seedling photomorphogenesis in rice and in Arabidopsis. Different light quality treatments were applied to seedlings. To dissect organ-specific light effects, we further profiled shoot and root organs in bo...
ORGANISM(S): Arabidopsis thaliana 
2010-06-10 | E-GEOD-2360 | biostudies-arrayexpress
TranscriptomicsSKIP Is a Component of the Spliceosome Linking Alternative Splicing and the Circadian Clock in Arabidopsis
Circadian clocks generate endogenous rhythms in most organisms from cyanobacteria to humans and facilitate entrainment to environmental diurnal cycles, thus conferring a fitness advantage. Both transcriptional and posttranslational mechanisms are prominent in the basic network architecture of circad...
ORGANISM(S): Arabidopsis thaliana 
2012-12-13 | E-GEOD-32216 | biostudies-arrayexpress
TranscriptomicsExpression Analysis of Rice Chromosome 4 Using Tiling Microarray
We analyzed the transcriptional activity of rice chromosom 4 using a tiling path microarray based on PCR-generated genomic DNA fragments. Five organ samples from various developmental stages and cultured cells were examined.
ORGANISM(S): Oryza sativa 
2010-06-10 | E-GEOD-2358 | biostudies-arrayexpress
Sort   by:  
 Page size