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TranscriptomicsTranscription profiling by array of human vitamin C-induced gene expression in GM5659 skin fibroblasts
The skin is a protective barrier against external insults and any lesion must be rapidly and efficiently repaired. Dermal fibroblasts are the major source of extracellular connective tissue matrix and play an important role in wound healing. Vitamin C is an important water-soluble free radical scave...
ORGANISM(S): Homo sapiens 
2009-02-21 | E-GEOD-11919 | biostudies-arrayexpress
TranscriptomicsDeep sequencing of C. elegans microRNAs under starvation conditions
In nature, animals often face feast or famine conditions. We aimed to identify the miRNAs of Caenorhabditis elegans that changed their expression under starvation conditions in stage L4 larvae. Our results highlight 14 miRNAs that show differential expression in starved versus well-fed larvae. In pa...
ORGANISM(S): Caenorhabditis elegans 
2016-01-27 | E-GEOD-67711 | biostudies-arrayexpress
OtherPromoter Capture Hi-C performed on human Type 3 Innate Lymphoid Cells (ILC3s)
This promoter capture Hi-C data in tonsil-derived ILC3 cells accompanies the manuscript: "High-resolution promoter interaction analysis implicates genes involved in activation of type 3 innate lymphoid cells in immune disease risk" (Malysheva/Ray-Jones/Lakes et al., Nat Gen 2026)
ORGANISM(S): Homo sapiens 
2026-01-28 | GSE216267 | GEO
GenomicsPromoter Capture Hi-C performed on human Type 3 Innate Lymphoid Cells (ILC3s)
Promoter Capture Hi-C performed on human Type 3 Innate Lymphoid Cells (ILC3s)
PRJNA892898 | ENA
ProteomicsChemical Penetration Enhancers Increase Hydrogen Peroxide Uptake in C. elegans for In Vivo Fast Photochemical Oxidation of Proteins
Fast photochemical oxidation of proteins (FPOP) is a hydroxyl radical protein footprinting method that covalently labels solvent accessible amino acids by photolysis of hydrogen peroxide. Recently, we expanded the use of FPOP for in vivo (IV-FPOP) covalent labeling in C. elegans. In initial IV-FPOP ...
ORGANISM(S): Caenorhabditis elegans 
2020-06-12 | PXD019290 | Pride
Chemical penetration enhancers Protein footprinting Fpop C. elegans In vivo 
TranscriptomicsC. elegans SAGE
The SAGE libraries were built from total mRNA populations in specific tissues, cells, mutation-specific populations, and all developmental stages of C. elegans. Tissue- and cell-specific libraries were generated from FACS-sorted cells marked by expression of specific promoter::GFP fusions Keywords ...
ORGANISM(S): Caenorhabditis elegans 
2004-06-11 | E-GEOD-1447 | biostudies-arrayexpress
TranscriptomicsHybridPoplar_H11-11_Leaves_MalacosomaDisstria_Herbivory
From a set of 15 standard, normalized or full-length cDNA libraries, we generated 139 007 3'- or 5'-end sequenced ESTs, representing more than one-third of the c. 385 000 publicly available Populus ESTs. Clustering and assembly of 107 519 3'-end ESTs resulted in 14 451 contigs and 20 560 singletons,...
ORGANISM(S): Populus trichocarpa x Populus deltoides 
2008-04-22 | E-GEOD-9522 | biostudies-arrayexpress
TranscriptomicsHigh-resolution mapping of the spatial organization of Caulobacter crescentus chromosome by chromosome conformation capture in conjunction with next-generation sequencing (Hi-C)
Chromosomes must be highly compacted and organized within cells, but how this is achieved in vivo remains poorly understood. We report the first use of Hi-C to map the structure of bacterial chromosomes at a high, unprecedented resolution. Analysis of Hi-C data and polymer modeling indicates that th...
ORGANISM(S): Caulobacter crescentus CB15 
2013-10-30 | E-GEOD-45966 | biostudies-arrayexpress
UnknownPathogenic REST variant causing Jones syndrome and a review of the literature.
Not available
S-EPMC10133349 | biostudies-literature
UnknownJones Fracture in the National Football League.
Not available
S-EPMC10819528 | biostudies-literature
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